RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 XKR9Q5GH70 373 aa19.92■□□□□ 0.78
VAT1-208ENST00000590924 MRPL10Q7Z7H8 261 aaKnown RBP19.92■□□□□ 0.78
VAT1-208ENST00000590924 VPS52Q8N1B4 723 aa19.92■□□□□ 0.78
VAT1-208ENST00000590924 IGSF22Q8N9C0 903 aa19.92■□□□□ 0.78
VAT1-208ENST00000590924 IGSF21Q96ID5 467 aa19.92■□□□□ 0.78
VAT1-208ENST00000590924 MTRQ99707 1265 aa19.92■□□□□ 0.78
VAT1-208ENST00000590924 BMP2KQ9NSY1 1161 aaPredicted RBP19.92■□□□□ 0.78
VAT1-208ENST00000590924 INPP5FQ9Y2H2 1132 aa19.92■□□□□ 0.78
VAT1-208ENST00000590924 IRAK3Q9Y616 596 aa19.92■□□□□ 0.78
VAT1-208ENST00000590924 PLXNA3P51805 1871 aa19.92■□□□□ 0.78
VAT1-208ENST00000590924 CLASP2O75122 1294 aaKnown RBP19.91■□□□□ 0.78
VAT1-208ENST00000590924 YEATS4O95619 227 aa19.91■□□□□ 0.78
VAT1-208ENST00000590924 GALTP07902 379 aa19.91■□□□□ 0.78
VAT1-208ENST00000590924 SRGAP2CP0DJJ0 459 aa19.91■□□□□ 0.78
VAT1-208ENST00000590924 HOXA11P31270 313 aaPredicted RBP19.91■□□□□ 0.78
VAT1-208ENST00000590924 RNASELQ05823 741 aaKnown RBP19.91■□□□□ 0.78
VAT1-208ENST00000590924 GIT2Q14161 759 aa19.91■□□□□ 0.78
VAT1-208ENST00000590924 PCBP1Q15365 356 aaKnown RBP eCLIP19.91■□□□□ 0.78
VAT1-208ENST00000590924 AGMOQ6ZNB7 445 aa19.91■□□□□ 0.78
VAT1-208ENST00000590924 BMP8AQ7Z5Y6 402 aa19.91■□□□□ 0.78
VAT1-208ENST00000590924 DDX53Q86TM3 631 aaKnown RBP19.91■□□□□ 0.78
VAT1-208ENST00000590924 RNF149Q8NC42 400 aa19.91■□□□□ 0.78
VAT1-208ENST00000590924 URGCPQ8TCY9 931 aa19.91■□□□□ 0.78
VAT1-208ENST00000590924 MFSD14AQ96MC6 490 aa19.91■□□□□ 0.78
VAT1-208ENST00000590924 CHMP5Q9NZZ3 219 aa19.91■□□□□ 0.78
VAT1-208ENST00000590924 CNTNAP2Q9UHC6 1331 aa19.91■□□□□ 0.78
VAT1-208ENST00000590924 ZBTB39O15060 712 aa19.9■□□□□ 0.78
VAT1-208ENST00000590924 SLITRK3O94933 977 aa19.9■□□□□ 0.78
VAT1-208ENST00000590924 LYPLA2O95372 231 aa19.9■□□□□ 0.78
VAT1-208ENST00000590924 CXCL14O95715 111 aa19.9■□□□□ 0.78
VAT1-208ENST00000590924 CTSAP10619 480 aa19.9■□□□□ 0.78
VAT1-208ENST00000590924 MUTP22033 750 aa19.9■□□□□ 0.78
VAT1-208ENST00000590924 ZXDAP98168 799 aa19.9■□□□□ 0.78
VAT1-208ENST00000590924 ITIH3Q06033 890 aa19.9■□□□□ 0.78
VAT1-208ENST00000590924 MXD4Q14582 209 aaPredicted RBP19.9■□□□□ 0.78
VAT1-208ENST00000590924 UBXN11Q5T124 520 aa19.9■□□□□ 0.78
VAT1-208ENST00000590924 TRIM67Q6ZTA4 783 aa19.9■□□□□ 0.78
VAT1-208ENST00000590924 TPH2Q8IWU9 490 aa19.9■□□□□ 0.78
VAT1-208ENST00000590924 LINC00301Q8NCQ3 95 aa19.9■□□□□ 0.78
VAT1-208ENST00000590924 ERMNQ8TAM6 284 aa19.9■□□□□ 0.78
VAT1-208ENST00000590924 AK8Q96MA6 479 aa19.9■□□□□ 0.78
VAT1-208ENST00000590924 HSD17B14Q9BPX1 270 aa19.9■□□□□ 0.78
VAT1-208ENST00000590924 EIF2AK1Q9BQI3 630 aaKnown RBP19.9■□□□□ 0.78
VAT1-208ENST00000590924 APOL5Q9BWW9 433 aa19.9■□□□□ 0.78
VAT1-208ENST00000590924 RSAD1Q9HA92 442 aa19.9■□□□□ 0.78
VAT1-208ENST00000590924 XPNPEP1Q9NQW7 623 aa19.9■□□□□ 0.78
VAT1-208ENST00000590924 TFIP11Q9UBB9 837 aaKnown RBP19.9■□□□□ 0.78
VAT1-208ENST00000590924 DNAJB4Q9UDY4 337 aa19.9■□□□□ 0.78
VAT1-208ENST00000590924 LRWD1Q9UFC0 647 aa19.9■□□□□ 0.78
VAT1-208ENST00000590924 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.89■□□□□ 0.77
VAT1-208ENST00000590924 PPP6R2O75170 966 aa19.89■□□□□ 0.77
VAT1-208ENST00000590924 ERLIN2O94905 339 aa19.89■□□□□ 0.77
VAT1-208ENST00000590924 CA8P35219 290 aa19.89■□□□□ 0.77
VAT1-208ENST00000590924 LONP1P36776 959 aaKnown RBP19.89■□□□□ 0.77
VAT1-208ENST00000590924 SLC11A1P49279 550 aa19.89■□□□□ 0.77
VAT1-208ENST00000590924 IL17AQ16552 155 aa19.89■□□□□ 0.77
VAT1-208ENST00000590924 BCL7CQ8WUZ0 217 aaPredicted RBP19.89■□□□□ 0.77
VAT1-208ENST00000590924 NECTIN4Q96NY8 510 aa19.89■□□□□ 0.77
VAT1-208ENST00000590924 POLR3CQ9BUI4 534 aaPredicted RBP19.89■□□□□ 0.77
VAT1-208ENST00000590924 GBP3Q9H0R5 595 aa19.89■□□□□ 0.77
VAT1-208ENST00000590924 ADAM7Q9H2U9 754 aa19.89■□□□□ 0.77
VAT1-208ENST00000590924 ANKEF1Q9NU02 776 aa19.89■□□□□ 0.77
VAT1-208ENST00000590924 KANSL3Q9P2N6 904 aa19.89■□□□□ 0.77
VAT1-208ENST00000590924 RCOR1Q9UKL0 485 aa19.89■□□□□ 0.77
VAT1-208ENST00000590924 SRPRBQ9Y5M8 271 aaKnown RBP19.89■□□□□ 0.77
VAT1-208ENST00000590924 TRIP11Q15643 1979 aa19.88■□□□□ 0.77
VAT1-208ENST00000590924 TMEM221A6NGB7 291 aa19.88■□□□□ 0.77
VAT1-208ENST00000590924 M0R296 226 aa19.88■□□□□ 0.77
VAT1-208ENST00000590924 SLC26A4O43511 780 aa19.88■□□□□ 0.77
VAT1-208ENST00000590924 B4GALT3O60512 393 aa19.88■□□□□ 0.77
VAT1-208ENST00000590924 NCLP19338 710 aaKnown RBP19.88■□□□□ 0.77
VAT1-208ENST00000590924 AXLP30530 894 aa19.88■□□□□ 0.77
VAT1-208ENST00000590924 PTENP60484 403 aa19.88■□□□□ 0.77
VAT1-208ENST00000590924 KRT85P78386 507 aa19.88■□□□□ 0.77
VAT1-208ENST00000590924 CEBPZQ03701 1054 aaKnown RBP19.88■□□□□ 0.77
VAT1-208ENST00000590924 DNM1Q05193 864 aaKnown RBP19.88■□□□□ 0.77
VAT1-208ENST00000590924 POU5F1BQ06416 359 aa19.88■□□□□ 0.77
VAT1-208ENST00000590924 STK38Q15208 465 aa19.88■□□□□ 0.77
VAT1-208ENST00000590924 CES5AQ6NT32 575 aa19.88■□□□□ 0.77
VAT1-208ENST00000590924 ZNF280BQ86YH2 543 aa19.88■□□□□ 0.77
VAT1-208ENST00000590924 IFNLR1Q8IU57 520 aaPredicted RBP19.88■□□□□ 0.77
VAT1-208ENST00000590924 KCTD17Q8N5Z5 321 aa19.88■□□□□ 0.77
VAT1-208ENST00000590924 CNNM3Q8NE01 707 aa19.88■□□□□ 0.77
VAT1-208ENST00000590924 TUFT1Q9NNX1 390 aa19.88■□□□□ 0.77
VAT1-208ENST00000590924 DZANK1Q9NVP4 752 aa19.88■□□□□ 0.77
VAT1-208ENST00000590924 STK39Q9UEW8 545 aa19.88■□□□□ 0.77
VAT1-208ENST00000590924 VWA3AA6NCI4 1184 aa19.87■□□□□ 0.77
VAT1-208ENST00000590924 POTEMA6NI47 508 aa19.87■□□□□ 0.77
VAT1-208ENST00000590924 SPTLC2O15270 562 aa19.87■□□□□ 0.77
VAT1-208ENST00000590924 TSPAN1O60635 241 aa19.87■□□□□ 0.77
VAT1-208ENST00000590924 DGAT1O75907 488 aa19.87■□□□□ 0.77
VAT1-208ENST00000590924 DDHD2O94830 711 aa19.87■□□□□ 0.77
VAT1-208ENST00000590924 XRCC6P12956 609 aaKnown RBP eCLIP19.87■□□□□ 0.77
VAT1-208ENST00000590924 RPA1P27694 616 aa19.87■□□□□ 0.77
VAT1-208ENST00000590924 AFF1P51825 1210 aaKnown RBP19.87■□□□□ 0.77
VAT1-208ENST00000590924 TFDP1Q14186 410 aa19.87■□□□□ 0.77
VAT1-208ENST00000590924 HAUS3Q68CZ6 603 aa19.87■□□□□ 0.77
VAT1-208ENST00000590924 KCNG4Q8TDN1 519 aa19.87■□□□□ 0.77
VAT1-208ENST00000590924 AUTS2Q8WXX7 1259 aa19.87■□□□□ 0.77
VAT1-208ENST00000590924 CCDC51Q96ER9 411 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 499.1 ms