RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 ZNF568Q3ZCX4 644 aa16.92■□□□□ 0.3
MBD1-222ENST00000590208 VSIG1Q86XK7 387 aa16.92■□□□□ 0.3
MBD1-222ENST00000590208 FOXN3O00409 490 aaPredicted RBP16.92■□□□□ 0.3
MBD1-222ENST00000590208 TGFB1I1O43294 461 aa16.92■□□□□ 0.3
MBD1-222ENST00000590208 FTLP02792 175 aaPredicted RBP16.92■□□□□ 0.3
MBD1-222ENST00000590208 FESP07332 822 aa16.92■□□□□ 0.3
MBD1-222ENST00000590208 TPBGLP0DKB5 382 aa16.92■□□□□ 0.3
MBD1-222ENST00000590208 CHRNB2P17787 502 aa16.92■□□□□ 0.3
MBD1-222ENST00000590208 GBP1P32455 592 aa16.92■□□□□ 0.3
MBD1-222ENST00000590208 TRIP13Q15645 432 aaPredicted RBP16.92■□□□□ 0.3
MBD1-222ENST00000590208 ADGRF4Q8IZF3 695 aa16.92■□□□□ 0.3
MBD1-222ENST00000590208 UBL4BQ8N7F7 174 aa16.92■□□□□ 0.3
MBD1-222ENST00000590208 CNBD1Q8NA66 436 aa16.92■□□□□ 0.3
MBD1-222ENST00000590208 FAM13CQ8NE31 585 aa16.92■□□□□ 0.3
MBD1-222ENST00000590208 SUPT20HQ8NEM7 779 aa16.92■□□□□ 0.3
MBD1-222ENST00000590208 TTC8Q8TAM2 541 aa16.92■□□□□ 0.3
MBD1-222ENST00000590208 PIGOQ8TEQ8 1089 aa16.92■□□□□ 0.3
MBD1-222ENST00000590208 SPOCK2Q92563 424 aa16.92■□□□□ 0.3
MBD1-222ENST00000590208 BORCS6Q96GS4 357 aa16.92■□□□□ 0.3
MBD1-222ENST00000590208 SERPINB12Q96P63 405 aa16.92■□□□□ 0.3
MBD1-222ENST00000590208 GPR101Q96P66 508 aaPredicted RBP16.92■□□□□ 0.3
MBD1-222ENST00000590208 TSC22D3Q99576 134 aa16.92■□□□□ 0.3
MBD1-222ENST00000590208 TAC1P20366 129 aa16.91■□□□□ 0.3
MBD1-222ENST00000590208 RPL13P26373 211 aaKnown RBP16.91■□□□□ 0.3
MBD1-222ENST00000590208 PEX5P50542 639 aa16.91■□□□□ 0.3
MBD1-222ENST00000590208 RAB27AP51159 221 aa16.91■□□□□ 0.3
MBD1-222ENST00000590208 MXRA7P84157 204 aa16.91■□□□□ 0.3
MBD1-222ENST00000590208 CYP4A11Q02928 519 aa16.91■□□□□ 0.3
MBD1-222ENST00000590208 CALCOCO2Q13137 446 aa16.91■□□□□ 0.3
MBD1-222ENST00000590208 MTFR1Q15390 333 aa16.91■□□□□ 0.3
MBD1-222ENST00000590208 FAM182BQ5T319 152 aa16.91■□□□□ 0.3
MBD1-222ENST00000590208 RNF43Q68DV7 783 aa16.91■□□□□ 0.3
MBD1-222ENST00000590208 FBF1Q8TES7 1133 aa16.91■□□□□ 0.3
MBD1-222ENST00000590208 C1orf54Q8WWF1 131 aa16.91■□□□□ 0.3
MBD1-222ENST00000590208 NUDCD1Q96RS6 583 aa16.91■□□□□ 0.3
MBD1-222ENST00000590208 MOV10L1Q9BXT6 1211 aaKnown RBP16.91■□□□□ 0.3
MBD1-222ENST00000590208 PITPNM3Q9BZ71 974 aa16.91■□□□□ 0.3
MBD1-222ENST00000590208 TAOK3Q9H2K8 898 aa16.91■□□□□ 0.3
MBD1-222ENST00000590208 PAPOLBQ9NRJ5 636 aaKnown RBP16.91■□□□□ 0.3
MBD1-222ENST00000590208 NEFHP12036 1026 aa16.91■□□□□ 0.3
MBD1-222ENST00000590208 FMO5P49326 533 aa16.91■□□□□ 0.3
MBD1-222ENST00000590208 RWDD2BP57060 319 aa16.91■□□□□ 0.3
MBD1-222ENST00000590208 ZC2HC1CQ53FD0 456 aaPredicted RBP16.91■□□□□ 0.3
MBD1-222ENST00000590208 SEL1L2Q5TEA6 688 aa16.91■□□□□ 0.3
MBD1-222ENST00000590208 ZNF449Q6P9G9 518 aa16.91■□□□□ 0.3
MBD1-222ENST00000590208 PRUNE1Q86TP1 453 aa16.91■□□□□ 0.3
MBD1-222ENST00000590208 FAM186BQ8IYM0 893 aa16.91■□□□□ 0.3
MBD1-222ENST00000590208 STK32AQ8WU08 396 aa16.91■□□□□ 0.3
MBD1-222ENST00000590208 RAB3IPQ96QF0 476 aaPredicted RBP16.91■□□□□ 0.3
MBD1-222ENST00000590208 PSTPIP2Q9H939 334 aa16.91■□□□□ 0.3
MBD1-222ENST00000590208 ZNF287Q9HBT7 754 aa16.91■□□□□ 0.3
MBD1-222ENST00000590208 WFS1O76024 890 aa16.9■□□□□ 0.3
MBD1-222ENST00000590208 PAPOLAP51003 745 aaKnown RBP16.9■□□□□ 0.3
MBD1-222ENST00000590208 SIX1Q15475 284 aaPredicted RBP16.9■□□□□ 0.3
MBD1-222ENST00000590208 TRMT10CQ7L0Y3 403 aaKnown RBP16.9■□□□□ 0.3
MBD1-222ENST00000590208 LBHD1Q9BQE6 289 aaPredicted RBP16.9■□□□□ 0.3
MBD1-222ENST00000590208 PLCD4Q9BRC7 762 aa16.9■□□□□ 0.3
MBD1-222ENST00000590208 CYP39A1Q9NYL5 469 aa16.9■□□□□ 0.3
MBD1-222ENST00000590208 CHKBQ9Y259 395 aa16.9■□□□□ 0.3
MBD1-222ENST00000590208 MYH14Q7Z406 1995 aaKnown RBP16.9■□□□□ 0.3
MBD1-222ENST00000590208 PASKQ96RG2 1323 aa16.9■□□□□ 0.3
MBD1-222ENST00000590208 hCG_1984214I3L0E3 225 aa16.9■□□□□ 0.3
MBD1-222ENST00000590208 AHCYL1O43865 530 aa16.9■□□□□ 0.3
MBD1-222ENST00000590208 ENTPD5O75356 428 aa16.9■□□□□ 0.3
MBD1-222ENST00000590208 INTS8Q75QN2 995 aaKnown RBP16.9■□□□□ 0.3
MBD1-222ENST00000590208 SLC13A5Q86YT5 568 aaPredicted RBP16.9■□□□□ 0.3
MBD1-222ENST00000590208 ZNF713Q8N859 430 aaPredicted RBP16.9■□□□□ 0.3
MBD1-222ENST00000590208 RPS6KC1Q96S38 1066 aa16.9■□□□□ 0.3
MBD1-222ENST00000590208 KIAA1683Q9H0B3 1180 aa16.9■□□□□ 0.3
MBD1-222ENST00000590208 LOC102724428A0A0B4J2F2 783 aa16.9■□□□□ 0.3
MBD1-222ENST00000590208 GTPBP10A4D1E9 387 aaKnown RBP16.9■□□□□ 0.3
MBD1-222ENST00000590208 TTLL1O95922 423 aa16.9■□□□□ 0.3
MBD1-222ENST00000590208 SPATA31C1P0DKV0 1188 aa16.9■□□□□ 0.3
MBD1-222ENST00000590208 DLATP10515 647 aaKnown RBP16.9■□□□□ 0.3
MBD1-222ENST00000590208 EPHB2P29323 1055 aa16.9■□□□□ 0.3
MBD1-222ENST00000590208 BTDP43251 543 aa16.9■□□□□ 0.3
MBD1-222ENST00000590208 SIK1P57059 783 aa16.9■□□□□ 0.3
MBD1-222ENST00000590208 MIGA2Q7L4E1 593 aa16.9■□□□□ 0.3
MBD1-222ENST00000590208 TEX9Q8N6V9 391 aa16.9■□□□□ 0.3
MBD1-222ENST00000590208 MAGEB18Q96M61 343 aa16.9■□□□□ 0.3
MBD1-222ENST00000590208 BHMT2Q9H2M3 363 aa16.9■□□□□ 0.3
MBD1-222ENST00000590208 DNAJC18Q9H819 358 aa16.9■□□□□ 0.3
MBD1-222ENST00000590208 SLCO1B3Q9NPD5 702 aa16.9■□□□□ 0.3
MBD1-222ENST00000590208 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.9■□□□□ 0.36e-7■■■■■ 205.9
MBD1-222ENST00000590208 DNM3Q9UQ16 869 aa16.9■□□□□ 0.3
MBD1-222ENST00000590208 PNMA6FA0A0J9YX94 578 aa16.89■□□□□ 0.29
MBD1-222ENST00000590208 MIF4GDA9UHW6 222 aaKnown RBP16.89■□□□□ 0.29
MBD1-222ENST00000590208 USP17L10C9JJH3 530 aa16.89■□□□□ 0.29
MBD1-222ENST00000590208 SLC16A3O15427 465 aaKnown RBP16.89■□□□□ 0.29
MBD1-222ENST00000590208 HSPA6P17066 643 aa16.89■□□□□ 0.29
MBD1-222ENST00000590208 NMT1P30419 496 aaKnown RBP16.89■□□□□ 0.29
MBD1-222ENST00000590208 SKIV2L2P42285 1042 aaKnown RBP16.89■□□□□ 0.29
MBD1-222ENST00000590208 PTDSS1P48651 473 aaKnown RBP16.89■□□□□ 0.29
MBD1-222ENST00000590208 NT5C2P49902 561 aa16.89■□□□□ 0.29
MBD1-222ENST00000590208 RBM26Q5T8P6 1007 aaKnown RBP16.89■□□□□ 0.29
MBD1-222ENST00000590208 PHLDB3Q6NSJ2 640 aa16.89■□□□□ 0.29
MBD1-222ENST00000590208 TEKT4Q8WW24 435 aa16.89■□□□□ 0.29
MBD1-222ENST00000590208 TBC1D10AQ9BXI6 508 aa16.89■□□□□ 0.29
MBD1-222ENST00000590208 LRMDAQ9H2I8 198 aa16.89■□□□□ 0.29
MBD1-222ENST00000590208 TXLNGQ9NUQ3 528 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms