RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 BFSP1Q12934 665 aa19.02■□□□□ 0.64
CXXC1-212ENST00000589940 PRPF4BQ13523 1007 aaKnown RBP19.02■□□□□ 0.64
CXXC1-212ENST00000589940 SLC9C1Q4G0N8 1177 aa19.02■□□□□ 0.64
CXXC1-212ENST00000589940 TCERG1LQ5VWI1 586 aa19.02■□□□□ 0.64
CXXC1-212ENST00000589940 DNAJB3Q8WWF6 145 aa19.02■□□□□ 0.64
CXXC1-212ENST00000589940 ANKFY1Q9P2R3 1169 aa19.02■□□□□ 0.64
CXXC1-212ENST00000589940 A0A0B4J269 797 aa19.02■□□□□ 0.64
CXXC1-212ENST00000589940 GOLGA8IPA6NC78 632 aa19.02■□□□□ 0.64
CXXC1-212ENST00000589940 GOLGA8JA6NMD2 632 aa19.02■□□□□ 0.64
CXXC1-212ENST00000589940 AFPP02771 609 aaKnown RBP19.02■□□□□ 0.64
CXXC1-212ENST00000589940 IQCF3P0C7M6 154 aa19.02■□□□□ 0.64
CXXC1-212ENST00000589940 KRT13P13646 458 aa19.02■□□□□ 0.64
CXXC1-212ENST00000589940 SYCP1Q15431 976 aa19.02■□□□□ 0.64
CXXC1-212ENST00000589940 KIZQ2M2Z5 673 aa19.02■□□□□ 0.64
CXXC1-212ENST00000589940 FAM47CQ5HY64 1035 aa19.02■□□□□ 0.64
CXXC1-212ENST00000589940 SRGAP1Q7Z6B7 1085 aa19.02■□□□□ 0.64
CXXC1-212ENST00000589940 CBWD2Q8IUF1 395 aa19.02■□□□□ 0.64
CXXC1-212ENST00000589940 GPD1LQ8N335 351 aa19.02■□□□□ 0.64
CXXC1-212ENST00000589940 NME8Q8N427 588 aa19.02■□□□□ 0.64
CXXC1-212ENST00000589940 ZBTB45Q96K62 511 aaPredicted RBP19.02■□□□□ 0.64
CXXC1-212ENST00000589940 PRIMPOLQ96LW4 560 aa19.02■□□□□ 0.64
CXXC1-212ENST00000589940 KIAA1586Q9HCI6 787 aa19.02■□□□□ 0.64
CXXC1-212ENST00000589940 AGO2Q9UKV8 859 aaKnown RBP19.02■□□□□ 0.64
CXXC1-212ENST00000589940 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.02■□□□□ 0.644e-7■■■□□ 18.1
CXXC1-212ENST00000589940 GPR32O75388 356 aa19.01■□□□□ 0.63
CXXC1-212ENST00000589940 TMEM62Q0P6H9 643 aa19.01■□□□□ 0.63
CXXC1-212ENST00000589940 HSP90AA2PQ14568 343 aaPredicted RBP19.01■□□□□ 0.63
CXXC1-212ENST00000589940 GDF6Q6KF10 455 aaPredicted RBP19.01■□□□□ 0.63
CXXC1-212ENST00000589940 TSHZ1Q6ZSZ6 1077 aa19.01■□□□□ 0.63
CXXC1-212ENST00000589940 ZNF710Q8N1W2 664 aa19.01■□□□□ 0.63
CXXC1-212ENST00000589940 ARRDC4Q8NCT1 418 aa19.01■□□□□ 0.63
CXXC1-212ENST00000589940 MSTO1Q9BUK6 570 aa19.01■□□□□ 0.63
CXXC1-212ENST00000589940 HAPLN2Q9GZV7 340 aa19.01■□□□□ 0.63
CXXC1-212ENST00000589940 UNC93B1Q9H1C4 597 aa19.01■□□□□ 0.63
CXXC1-212ENST00000589940 GRIN2DO15399 1336 aa19.01■□□□□ 0.63
CXXC1-212ENST00000589940 CLDN3O15551 220 aa19.01■□□□□ 0.63
CXXC1-212ENST00000589940 EXTL3O43909 919 aa19.01■□□□□ 0.63
CXXC1-212ENST00000589940 ADRB2P07550 413 aa19.01■□□□□ 0.63
CXXC1-212ENST00000589940 MATR3P43243 847 aaKnown RBP eCLIP19.01■□□□□ 0.63
CXXC1-212ENST00000589940 AMHR2Q16671 573 aa19.01■□□□□ 0.63
CXXC1-212ENST00000589940 GCOM2Q9BZD3 368 aaPredicted RBP19.01■□□□□ 0.63
CXXC1-212ENST00000589940 B4GALT5O43286 388 aa19■□□□□ 0.63
CXXC1-212ENST00000589940 CSDE1O75534 798 aaKnown RBP19■□□□□ 0.63
CXXC1-212ENST00000589940 MCCD1P59942 119 aaPredicted RBP19■□□□□ 0.63
CXXC1-212ENST00000589940 TRIM14Q14142 442 aa19■□□□□ 0.63
CXXC1-212ENST00000589940 ATF7IP2Q5U623 682 aa19■□□□□ 0.63
CXXC1-212ENST00000589940 PPFIBP1Q86W92 1011 aa19■□□□□ 0.63
CXXC1-212ENST00000589940 CCDC150Q8NCX0 1101 aa19■□□□□ 0.63
CXXC1-212ENST00000589940 GLT1D1Q96MS3 346 aa19■□□□□ 0.63
CXXC1-212ENST00000589940 FAM213AQ9BRX8 229 aa19■□□□□ 0.63
CXXC1-212ENST00000589940 PAK6Q9NQU5 681 aaPredicted RBP19■□□□□ 0.63
CXXC1-212ENST00000589940 SIK3Q9Y2K2 1263 aa19■□□□□ 0.63
CXXC1-212ENST00000589940 CNTNAP2Q9UHC6 1331 aa19■□□□□ 0.63
CXXC1-212ENST00000589940 TRIP12Q14669 1992 aaPredicted RBP19■□□□□ 0.63
CXXC1-212ENST00000589940 LDHAP00338 332 aaKnown RBP19■□□□□ 0.63
CXXC1-212ENST00000589940 PROZP22891 400 aa19■□□□□ 0.63
CXXC1-212ENST00000589940 VAMP7P51809 220 aa19■□□□□ 0.63
CXXC1-212ENST00000589940 CCDC155Q8N6L0 562 aa19■□□□□ 0.63
CXXC1-212ENST00000589940 VTI1AQ96AJ9 217 aa19■□□□□ 0.63
CXXC1-212ENST00000589940 TCHPQ9BT92 498 aa19■□□□□ 0.63
CXXC1-212ENST00000589940 PTPRHQ9HD43 1115 aa19■□□□□ 0.63
CXXC1-212ENST00000589940 GINS2Q9Y248 185 aa19■□□□□ 0.63
CXXC1-212ENST00000589940 TNFSF13BQ9Y275 285 aa19■□□□□ 0.63
CXXC1-212ENST00000589940 ABLIM1O14639 778 aa18.99■□□□□ 0.63
CXXC1-212ENST00000589940 GYPCP04921 128 aa18.99■□□□□ 0.63
CXXC1-212ENST00000589940 MCL1Q07820 350 aa18.99■□□□□ 0.63
CXXC1-212ENST00000589940 ITGA7Q13683 1181 aa18.99■□□□□ 0.63
CXXC1-212ENST00000589940 ARID5BQ14865 1188 aa18.99■□□□□ 0.63
CXXC1-212ENST00000589940 TMEM132AQ24JP5 1023 aa18.99■□□□□ 0.63
CXXC1-212ENST00000589940 SERINC5Q86VE9 423 aa18.99■□□□□ 0.63
CXXC1-212ENST00000589940 MFSD14AQ96MC6 490 aa18.99■□□□□ 0.63
CXXC1-212ENST00000589940 FRMPD3Q5JV73 1810 aa18.99■□□□□ 0.63
CXXC1-212ENST00000589940 ZNF233A6NK53 670 aa18.98■□□□□ 0.63
CXXC1-212ENST00000589940 TRIM49P0CI25 452 aa18.98■□□□□ 0.63
CXXC1-212ENST00000589940 TRIM49CP0CI26 452 aa18.98■□□□□ 0.63
CXXC1-212ENST00000589940 SFPQP23246 707 aaKnown RBP eCLIP18.98■□□□□ 0.63
CXXC1-212ENST00000589940 CYP24A1Q07973 514 aa18.98■□□□□ 0.63
CXXC1-212ENST00000589940 MPZL3Q6UWV2 235 aa18.98■□□□□ 0.63
CXXC1-212ENST00000589940 PCMTD1Q96MG8 357 aaPredicted RBP18.98■□□□□ 0.63
CXXC1-212ENST00000589940 OSMRQ99650 979 aa18.98■□□□□ 0.63
CXXC1-212ENST00000589940 NUP58Q9BVL2 599 aa18.98■□□□□ 0.63
CXXC1-212ENST00000589940 ERLIN2O94905 339 aa18.98■□□□□ 0.63
CXXC1-212ENST00000589940 RPLP2P05387 115 aaKnown RBP18.98■□□□□ 0.63
CXXC1-212ENST00000589940 TPM1P09493 284 aa18.98■□□□□ 0.63
CXXC1-212ENST00000589940 DARSP14868 501 aaKnown RBP18.98■□□□□ 0.63
CXXC1-212ENST00000589940 KLK7P49862 253 aa18.98■□□□□ 0.63
CXXC1-212ENST00000589940 PTPN11Q06124 597 aaPredicted RBP18.98■□□□□ 0.63
CXXC1-212ENST00000589940 ENPEPQ07075 957 aa18.98■□□□□ 0.63
CXXC1-212ENST00000589940 RBL2Q08999 1139 aa18.98■□□□□ 0.63
CXXC1-212ENST00000589940 NOLC1Q14978 699 aaKnown RBP eCLIP18.98■□□□□ 0.63
CXXC1-212ENST00000589940 PCBP1Q15365 356 aaKnown RBP eCLIP18.98■□□□□ 0.631e-6■■■■□ 19.9
CXXC1-212ENST00000589940 USP37Q86T82 979 aa18.98■□□□□ 0.63
CXXC1-212ENST00000589940 LRRC8AQ8IWT6 810 aa18.98■□□□□ 0.63
CXXC1-212ENST00000589940 PLEKHO2Q8TD55 490 aa18.98■□□□□ 0.63
CXXC1-212ENST00000589940 CACTINQ8WUQ7 758 aaKnown RBP18.98■□□□□ 0.63
CXXC1-212ENST00000589940 CDHR5Q9HBB8 845 aa18.98■□□□□ 0.63
CXXC1-212ENST00000589940 A0A1W2PQ45 241 aaPredicted RBP18.97■□□□□ 0.63
CXXC1-212ENST00000589940 A0A1W2PQY0 241 aa18.97■□□□□ 0.63
CXXC1-212ENST00000589940 GTPBP10A4D1E9 387 aaKnown RBP18.97■□□□□ 0.63
CXXC1-212ENST00000589940 TSPAN1O60635 241 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 231.9 ms