RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 TNFSF13BQ9Y275 285 aa16.63■□□□□ 0.25
ATG4D-211ENST00000589753 NR2E3Q9Y5X4 410 aa16.63■□□□□ 0.25
ATG4D-211ENST00000589753 SCN5AQ14524 2016 aa16.62■□□□□ 0.25
ATG4D-211ENST00000589753 TISP43B9A030 160 aa16.62■□□□□ 0.25
ATG4D-211ENST00000589753 ANKRD63C9JTQ0 380 aa16.62■□□□□ 0.25
ATG4D-211ENST00000589753 PDXKO00764 312 aa16.62■□□□□ 0.25
ATG4D-211ENST00000589753 CALUO43852 315 aaPredicted RBP16.62■□□□□ 0.25
ATG4D-211ENST00000589753 ZSCAN20P17040 1043 aaPredicted RBP16.62■□□□□ 0.25
ATG4D-211ENST00000589753 CCNE1P24864 410 aa16.62■□□□□ 0.25
ATG4D-211ENST00000589753 MATR3P43243 847 aaKnown RBP eCLIP16.62■□□□□ 0.25
ATG4D-211ENST00000589753 SNRPFP62306 86 aaKnown RBP16.62■□□□□ 0.25
ATG4D-211ENST00000589753 PAK1Q13153 545 aa16.62■□□□□ 0.25
ATG4D-211ENST00000589753 CT47A1Q5JQC4 288 aaPredicted RBP16.62■□□□□ 0.25
ATG4D-211ENST00000589753 SLFN12LQ6IEE8 588 aa16.62■□□□□ 0.25
ATG4D-211ENST00000589753 CENPPQ6IPU0 288 aa16.62■□□□□ 0.25
ATG4D-211ENST00000589753 SLC39A4Q6P5W5 647 aa16.62■□□□□ 0.25
ATG4D-211ENST00000589753 FAM43BQ6ZT52 329 aaPredicted RBP16.62■□□□□ 0.25
ATG4D-211ENST00000589753 CDR2LQ86X02 465 aaPredicted RBP16.62■□□□□ 0.25
ATG4D-211ENST00000589753 RPUSD2Q8IZ73 545 aaKnown RBP16.62■□□□□ 0.25
ATG4D-211ENST00000589753 GOLGA5Q8TBA6 731 aa16.62■□□□□ 0.25
ATG4D-211ENST00000589753 NELFBQ8WX92 580 aa16.62■□□□□ 0.25
ATG4D-211ENST00000589753 P2RX5Q93086 422 aa16.62■□□□□ 0.25
ATG4D-211ENST00000589753 CCDC51Q96ER9 411 aa16.62■□□□□ 0.25
ATG4D-211ENST00000589753 TSG101Q99816 390 aa16.62■□□□□ 0.25
ATG4D-211ENST00000589753 ADPGKQ9BRR6 497 aa16.62■□□□□ 0.25
ATG4D-211ENST00000589753 TCHPQ9BT92 498 aa16.62■□□□□ 0.25
ATG4D-211ENST00000589753 FTHL17Q9BXU8 183 aa16.62■□□□□ 0.25
ATG4D-211ENST00000589753 PDZD7Q9H5P4 517 aa16.62■□□□□ 0.25
ATG4D-211ENST00000589753 PTPRHQ9HD43 1115 aa16.62■□□□□ 0.25
ATG4D-211ENST00000589753 PCDH10Q9P2E7 1040 aa16.62■□□□□ 0.25
ATG4D-211ENST00000589753 CGNQ9P2M7 1197 aaKnown RBP16.62■□□□□ 0.25
ATG4D-211ENST00000589753 ANKFY1Q9P2R3 1169 aa16.62■□□□□ 0.25
ATG4D-211ENST00000589753 TRAF3IP3Q9Y228 551 aa16.62■□□□□ 0.25
ATG4D-211ENST00000589753 BICDL2A1A5D9 508 aa16.61■□□□□ 0.25
ATG4D-211ENST00000589753 CLDN3O15551 220 aa16.61■□□□□ 0.25
ATG4D-211ENST00000589753 PFKMP08237 780 aa16.61■□□□□ 0.25
ATG4D-211ENST00000589753 PROZP22891 400 aa16.61■□□□□ 0.25
ATG4D-211ENST00000589753 FPGSQ05932 587 aa16.61■□□□□ 0.25
ATG4D-211ENST00000589753 PPIGQ13427 754 aaKnown RBP eCLIP16.61■□□□□ 0.252e-6■■□□□ 14.2
ATG4D-211ENST00000589753 DSC3Q14574 896 aa16.61■□□□□ 0.25
ATG4D-211ENST00000589753 ZNF568Q3ZCX4 644 aa16.61■□□□□ 0.25
ATG4D-211ENST00000589753 ANO6Q4KMQ2 910 aa16.61■□□□□ 0.25
ATG4D-211ENST00000589753 EEF1DP3Q658K8 133 aa16.61■□□□□ 0.25
ATG4D-211ENST00000589753 TWF2Q6IBS0 349 aaKnown RBP16.61■□□□□ 0.25
ATG4D-211ENST00000589753 CNKSR3Q6P9H4 555 aa16.61■□□□□ 0.25
ATG4D-211ENST00000589753 SLC27A1Q6PCB7 646 aa16.61■□□□□ 0.25
ATG4D-211ENST00000589753 MPZL3Q6UWV2 235 aa16.61■□□□□ 0.25
ATG4D-211ENST00000589753 C11orf57Q6ZUT1 292 aaPredicted RBP16.61■□□□□ 0.25
ATG4D-211ENST00000589753 APBB1IPQ7Z5R6 666 aaPredicted RBP16.61■□□□□ 0.25
ATG4D-211ENST00000589753 ZBTB45Q96K62 511 aaPredicted RBP16.61■□□□□ 0.25
ATG4D-211ENST00000589753 ANP32EQ9BTT0 268 aa16.61■□□□□ 0.25
ATG4D-211ENST00000589753 DNAJC25Q9H1X3 360 aa16.61■□□□□ 0.25
ATG4D-211ENST00000589753 AGPAT3Q9NRZ7 376 aa16.61■□□□□ 0.25
ATG4D-211ENST00000589753 RWDD2AQ9UIY3 292 aa16.61■□□□□ 0.25
ATG4D-211ENST00000589753 STYXL1Q9Y6J8 313 aa16.61■□□□□ 0.25
ATG4D-211ENST00000589753 LTBP2Q14767 1821 aa16.61■□□□□ 0.25
ATG4D-211ENST00000589753 TRIM49BA6NDI0 452 aa16.6■□□□□ 0.25
ATG4D-211ENST00000589753 ABLIM1O14639 778 aa16.6■□□□□ 0.25
ATG4D-211ENST00000589753 CLIC2O15247 247 aa16.6■□□□□ 0.25
ATG4D-211ENST00000589753 MGEA5O60502 916 aa16.6■□□□□ 0.25
ATG4D-211ENST00000589753 GARTP22102 1010 aa16.6■□□□□ 0.25
ATG4D-211ENST00000589753 ERCC5P28715 1186 aaPredicted RBP16.6■□□□□ 0.25
ATG4D-211ENST00000589753 PMS1P54277 932 aaKnown RBP16.6■□□□□ 0.25
ATG4D-211ENST00000589753 STX17P56962 302 aa16.6■□□□□ 0.25
ATG4D-211ENST00000589753 LRRC63Q05C16 580 aa16.6■□□□□ 0.25
ATG4D-211ENST00000589753 MCL1Q07820 350 aa16.6■□□□□ 0.25
ATG4D-211ENST00000589753 NOLC1Q14978 699 aaKnown RBP eCLIP16.6■□□□□ 0.25
ATG4D-211ENST00000589753 DCAF4L1Q3SXM0 396 aa16.6■□□□□ 0.25
ATG4D-211ENST00000589753 ZCWPW2Q504Y3 356 aa16.6■□□□□ 0.25
ATG4D-211ENST00000589753 ANKRD40Q6AI12 368 aa16.6■□□□□ 0.25
ATG4D-211ENST00000589753 ARMCX5Q6P1M9 558 aa16.6■□□□□ 0.25
ATG4D-211ENST00000589753 LRSAM1Q6UWE0 723 aa16.6■□□□□ 0.25
ATG4D-211ENST00000589753 ZBTB33Q86T24 672 aa16.6■□□□□ 0.25
ATG4D-211ENST00000589753 POMGNT1Q8WZA1 660 aa16.6■□□□□ 0.25
ATG4D-211ENST00000589753 VWCEQ96DN2 955 aa16.6■□□□□ 0.25
ATG4D-211ENST00000589753 ADAM2Q99965 735 aa16.6■□□□□ 0.25
ATG4D-211ENST00000589753 LBHD1Q9BQE6 289 aaPredicted RBP16.6■□□□□ 0.25
ATG4D-211ENST00000589753 NAT10Q9H0A0 1025 aaKnown RBP16.6■□□□□ 0.25
ATG4D-211ENST00000589753 IL23AQ9NPF7 189 aa16.6■□□□□ 0.25
ATG4D-211ENST00000589753 CAPN15O75808 1086 aa16.59■□□□□ 0.25
ATG4D-211ENST00000589753 NPTXRO95502 500 aa16.59■□□□□ 0.25
ATG4D-211ENST00000589753 MCF2P10911 925 aa16.59■□□□□ 0.25
ATG4D-211ENST00000589753 HARSP12081 509 aaKnown RBP16.59■□□□□ 0.25
ATG4D-211ENST00000589753 ADSSP30520 456 aa16.59■□□□□ 0.25
ATG4D-211ENST00000589753 RGS19P49795 217 aa16.59■□□□□ 0.25
ATG4D-211ENST00000589753 ZNF445P59923 1031 aa16.59■□□□□ 0.25
ATG4D-211ENST00000589753 NFIL3Q16649 462 aa16.59■□□□□ 0.25
ATG4D-211ENST00000589753 TCTN1Q2MV58 587 aa16.59■□□□□ 0.25
ATG4D-211ENST00000589753 EDRF1Q3B7T1 1238 aa16.59■□□□□ 0.25
ATG4D-211ENST00000589753 UBXN11Q5T124 520 aa16.59■□□□□ 0.25
ATG4D-211ENST00000589753 C12orf56Q8IXR9 622 aa16.59■□□□□ 0.25
ATG4D-211ENST00000589753 CBWD1Q9BRT8 395 aa16.59■□□□□ 0.25
ATG4D-211ENST00000589753 MSTO1Q9BUK6 570 aa16.59■□□□□ 0.25
ATG4D-211ENST00000589753 EIF2AQ9BY44 585 aaKnown RBP16.59■□□□□ 0.25
ATG4D-211ENST00000589753 TRIM6Q9C030 488 aaPredicted RBP16.59■□□□□ 0.25
ATG4D-211ENST00000589753 HAPLN2Q9GZV7 340 aa16.59■□□□□ 0.25
ATG4D-211ENST00000589753 CDT1Q9H211 546 aa16.59■□□□□ 0.25
ATG4D-211ENST00000589753 PCIF1Q9H4Z3 704 aa16.59■□□□□ 0.25
ATG4D-211ENST00000589753 RGS18Q9NS28 235 aa16.59■□□□□ 0.25
ATG4D-211ENST00000589753 A0A0B4J269 797 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms