RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 NT5C3AQ9H0P0 336 aa10.9□□□□□ -0.66
PTPN2-208ENST00000589216 GBP3Q9H0R5 595 aa10.9□□□□□ -0.66
PTPN2-208ENST00000589216 LMAN2LQ9H0V9 348 aa10.9□□□□□ -0.66
PTPN2-208ENST00000589216 NRDE2Q9H7Z3 1164 aa10.9□□□□□ -0.66
PTPN2-208ENST00000589216 UBE2ZQ9H832 354 aaPredicted RBP10.9□□□□□ -0.66
PTPN2-208ENST00000589216 PRMT7Q9NVM4 692 aaPredicted RBP10.9□□□□□ -0.66
PTPN2-208ENST00000589216 CITO14578 2027 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 C5orf42Q9H799 3197 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 F8W810 466 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 TBX10O75333 385 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 DDHD2O94830 711 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 F13A1P00488 732 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 POMCP01189 267 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 HSP90AA1P07900 732 aaKnown RBP10.89□□□□□ -0.67
PTPN2-208ENST00000589216 SKIP12755 728 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 AKAP5P24588 427 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 GUCY2CP25092 1073 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 AXLP30530 894 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 UBA7P41226 1012 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 SLC11A1P49279 550 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 SCNN1GP51170 649 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 BCAR1P56945 870 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 RBM10P98175 930 aaKnown RBP10.89□□□□□ -0.67
PTPN2-208ENST00000589216 DLX2Q07687 328 aaPredicted RBP10.89□□□□□ -0.67
PTPN2-208ENST00000589216 PRPF4BQ13523 1007 aaKnown RBP10.89□□□□□ -0.67
PTPN2-208ENST00000589216 DHX8Q14562 1220 aaKnown RBP10.89□□□□□ -0.67
PTPN2-208ENST00000589216 PPP2R5AQ15172 486 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 PCBP1Q15365 356 aaKnown RBP eCLIP10.89□□□□□ -0.67
PTPN2-208ENST00000589216 MAPK6Q16659 721 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 NAALADL2Q58DX5 795 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 NT5DC1Q5TFE4 455 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 SLC27A1Q6PCB7 646 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 GPBP1Q86WP2 473 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 CEP120Q8N960 986 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 IFT74Q96LB3 600 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 PRIMPOLQ96LW4 560 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 NECAB3Q96P71 396 aaPredicted RBP10.89□□□□□ -0.67
PTPN2-208ENST00000589216 ASB2Q96Q27 587 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 GAD1Q99259 594 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 REEP2Q9BRK0 252 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 MRPL9Q9BYD2 267 aaKnown RBP10.89□□□□□ -0.67
PTPN2-208ENST00000589216 C2orf40Q9H1Z8 148 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 KLK14Q9P0G3 267 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 ARHGAP28Q9P2N2 729 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 CACNG4Q9UBN1 327 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 PCDHB12Q9Y5F1 795 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 PLXNA3P51805 1871 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 MUC3AQ02505 3323 aa10.89□□□□□ -0.67
PTPN2-208ENST00000589216 VWA8A3KMH1 1905 aa10.88□□□□□ -0.67
PTPN2-208ENST00000589216 TCHHQ07283 1943 aa10.88□□□□□ -0.67
PTPN2-208ENST00000589216 ARL5CA6NH57 179 aa10.88□□□□□ -0.67
PTPN2-208ENST00000589216 CCDC169A6NNP5 214 aa10.88□□□□□ -0.67
PTPN2-208ENST00000589216 H3BQ06 376 aaPredicted RBP10.88□□□□□ -0.67
PTPN2-208ENST00000589216 ACKR2O00590 384 aa10.88□□□□□ -0.67
PTPN2-208ENST00000589216 ABLIM1O14639 778 aa10.88□□□□□ -0.67
PTPN2-208ENST00000589216 FSCN2O14926 492 aa10.88□□□□□ -0.67
PTPN2-208ENST00000589216 INPPL1O15357 1258 aa10.88□□□□□ -0.67
PTPN2-208ENST00000589216 SLC16A4O15374 487 aa10.88□□□□□ -0.67
PTPN2-208ENST00000589216 GLP2RO95838 553 aa10.88□□□□□ -0.67
PTPN2-208ENST00000589216 ZSCAN22P10073 491 aaPredicted RBP10.88□□□□□ -0.67
PTPN2-208ENST00000589216 ITGA4P13612 1032 aa10.88□□□□□ -0.67
PTPN2-208ENST00000589216 KCNA5P22460 613 aa10.88□□□□□ -0.67
PTPN2-208ENST00000589216 LTBRP36941 435 aa10.88□□□□□ -0.67
PTPN2-208ENST00000589216 DMP1Q13316 513 aaPredicted RBP10.88□□□□□ -0.67
PTPN2-208ENST00000589216 SLC39A14Q15043 492 aa10.88□□□□□ -0.67
PTPN2-208ENST00000589216 TJAP1Q5JTD0 557 aa10.88□□□□□ -0.67
PTPN2-208ENST00000589216 PLPP4Q5VZY2 271 aa10.88□□□□□ -0.67
PTPN2-208ENST00000589216 LINC00301Q8NCQ3 95 aa10.88□□□□□ -0.67
PTPN2-208ENST00000589216 GSTCDQ8NEC7 633 aa10.88□□□□□ -0.67
PTPN2-208ENST00000589216 VN1R2Q8NFZ6 395 aa10.88□□□□□ -0.67
PTPN2-208ENST00000589216 ATXN2LQ8WWM7 1075 aaKnown RBP10.88□□□□□ -0.67
PTPN2-208ENST00000589216 MRPS27Q92552 414 aaKnown RBP10.88□□□□□ -0.67
PTPN2-208ENST00000589216 RAD54LQ92698 747 aa10.88□□□□□ -0.67
PTPN2-208ENST00000589216 HLA-CQ95604 372 aa10.88□□□□□ -0.67
PTPN2-208ENST00000589216 PGBD4Q96DM1 585 aa10.88□□□□□ -0.67
PTPN2-208ENST00000589216 DRC1Q96MC2 740 aa10.88□□□□□ -0.67
PTPN2-208ENST00000589216 CCSER1Q9C0I3 900 aa10.88□□□□□ -0.67
PTPN2-208ENST00000589216 ZSCAN16Q9H4T2 348 aaPredicted RBP10.88□□□□□ -0.67
PTPN2-208ENST00000589216 TLR9Q9NR96 1032 aa10.88□□□□□ -0.67
PTPN2-208ENST00000589216 AAASQ9NRG9 546 aa10.88□□□□□ -0.67
PTPN2-208ENST00000589216 MARCH5Q9NX47 278 aa10.88□□□□□ -0.67
PTPN2-208ENST00000589216 MIOSQ9NXC5 875 aa10.88□□□□□ -0.67
PTPN2-208ENST00000589216 TFIP11Q9UBB9 837 aaKnown RBP10.88□□□□□ -0.67
PTPN2-208ENST00000589216 SRPRBQ9Y5M8 271 aaKnown RBP10.88□□□□□ -0.67
PTPN2-208ENST00000589216 ANK1P16157 1881 aa10.87□□□□□ -0.67
PTPN2-208ENST00000589216 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.87□□□□□ -0.67
PTPN2-208ENST00000589216 HIDE1A8MVS5 230 aa10.87□□□□□ -0.67
PTPN2-208ENST00000589216 PTGESO14684 152 aa10.87□□□□□ -0.67
PTPN2-208ENST00000589216 N4BP3O15049 544 aa10.87□□□□□ -0.67
PTPN2-208ENST00000589216 SLC26A4O43511 780 aa10.87□□□□□ -0.67
PTPN2-208ENST00000589216 RECQL4O94761 1208 aa10.87□□□□□ -0.67
PTPN2-208ENST00000589216 GALTP07902 379 aa10.87□□□□□ -0.67
PTPN2-208ENST00000589216 BMP1P13497 986 aa10.87□□□□□ -0.67
PTPN2-208ENST00000589216 PPM1AP35813 382 aa10.87□□□□□ -0.67
PTPN2-208ENST00000589216 NRIP1P48552 1158 aa10.87□□□□□ -0.67
PTPN2-208ENST00000589216 MRPS5P82675 430 aaKnown RBP10.87□□□□□ -0.67
PTPN2-208ENST00000589216 PLCB3Q01970 1234 aa10.87□□□□□ -0.67
PTPN2-208ENST00000589216 UBE3AQ05086 875 aa10.87□□□□□ -0.67
PTPN2-208ENST00000589216 RNASELQ05823 741 aaKnown RBP10.87□□□□□ -0.67
PTPN2-208ENST00000589216 DSC1Q08554 894 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms