RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 RGS18Q9NS28 235 aa16.97■□□□□ 0.31
RPRD1A-208ENST00000589050 TMEM63CQ9P1W3 806 aa16.97■□□□□ 0.31
RPRD1A-208ENST00000589050 SCN5AQ14524 2016 aa16.97■□□□□ 0.31
RPRD1A-208ENST00000589050 A0A1B0GUA9 196 aa16.96■□□□□ 0.31
RPRD1A-208ENST00000589050 ZBBXA8MT70 800 aa16.96■□□□□ 0.31
RPRD1A-208ENST00000589050 ENPP3O14638 875 aa16.96■□□□□ 0.31
RPRD1A-208ENST00000589050 EFCAB14O75071 495 aa16.96■□□□□ 0.31
RPRD1A-208ENST00000589050 KIF20AO95235 890 aa16.96■□□□□ 0.31
RPRD1A-208ENST00000589050 PIGRP01833 764 aa16.96■□□□□ 0.31
RPRD1A-208ENST00000589050 MORC3Q14149 939 aa16.96■□□□□ 0.31
RPRD1A-208ENST00000589050 BMT2Q1RMZ1 405 aa16.96■□□□□ 0.31
RPRD1A-208ENST00000589050 EEF1DP3Q658K8 133 aa16.96■□□□□ 0.31
RPRD1A-208ENST00000589050 SLC27A1Q6PCB7 646 aa16.96■□□□□ 0.31
RPRD1A-208ENST00000589050 ZPBP2Q6X784 338 aa16.96■□□□□ 0.31
RPRD1A-208ENST00000589050 RTN4RL1Q86UN2 441 aaPredicted RBP16.96■□□□□ 0.31
RPRD1A-208ENST00000589050 MYOCDQ8IZQ8 938 aa16.96■□□□□ 0.31
RPRD1A-208ENST00000589050 CCDC51Q96ER9 411 aa16.96■□□□□ 0.31
RPRD1A-208ENST00000589050 IKZF4Q9H2S9 585 aa16.96■□□□□ 0.31
RPRD1A-208ENST00000589050 TMEM206Q9H813 350 aa16.96■□□□□ 0.31
RPRD1A-208ENST00000589050 C1orf112Q9NSG2 853 aa16.96■□□□□ 0.31
RPRD1A-208ENST00000589050 MAPK8IP1Q9UQF2 711 aa16.96■□□□□ 0.31
RPRD1A-208ENST00000589050 TNFSF13BQ9Y275 285 aa16.96■□□□□ 0.31
RPRD1A-208ENST00000589050 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.95■□□□□ 0.3
RPRD1A-208ENST00000589050 TOM1L1O75674 476 aa16.95■□□□□ 0.3
RPRD1A-208ENST00000589050 NPTXRO95502 500 aa16.95■□□□□ 0.3
RPRD1A-208ENST00000589050 IBSPP21815 317 aaPredicted RBP16.95■□□□□ 0.3
RPRD1A-208ENST00000589050 HOXD13P35453 343 aa16.95■□□□□ 0.3
RPRD1A-208ENST00000589050 MATR3P43243 847 aaKnown RBP eCLIP16.95■□□□□ 0.3
RPRD1A-208ENST00000589050 KCNJ6P48051 423 aa16.95■□□□□ 0.3
RPRD1A-208ENST00000589050 UBXN11Q5T124 520 aa16.95■□□□□ 0.3
RPRD1A-208ENST00000589050 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.95■□□□□ 0.3
RPRD1A-208ENST00000589050 RBM43Q6ZSC3 357 aaKnown RBP16.95■□□□□ 0.3
RPRD1A-208ENST00000589050 SLC24A5Q71RS6 500 aa16.95■□□□□ 0.3
RPRD1A-208ENST00000589050 TRIML1Q8N9V2 468 aa16.95■□□□□ 0.3
RPRD1A-208ENST00000589050 HERVK_113Q902F9 699 aa16.95■□□□□ 0.3
RPRD1A-208ENST00000589050 ADPGKQ9BRR6 497 aa16.95■□□□□ 0.3
RPRD1A-208ENST00000589050 TCHPQ9BT92 498 aa16.95■□□□□ 0.3
RPRD1A-208ENST00000589050 EIF2AQ9BY44 585 aaKnown RBP16.95■□□□□ 0.3
RPRD1A-208ENST00000589050 MTIF3Q9H2K0 278 aaKnown RBP16.95■□□□□ 0.3
RPRD1A-208ENST00000589050 ANKFY1Q9P2R3 1169 aa16.95■□□□□ 0.3
RPRD1A-208ENST00000589050 ZMYM2Q9UBW7 1377 aa16.94■□□□□ 0.3
RPRD1A-208ENST00000589050 TISP43B9A030 160 aa16.94■□□□□ 0.3
RPRD1A-208ENST00000589050 ANKRD63C9JTQ0 380 aa16.94■□□□□ 0.3
RPRD1A-208ENST00000589050 AMHP03971 560 aa16.94■□□□□ 0.3
RPRD1A-208ENST00000589050 BMP6P22004 513 aa16.94■□□□□ 0.3
RPRD1A-208ENST00000589050 RAB27AP51159 221 aa16.94■□□□□ 0.3
RPRD1A-208ENST00000589050 WDR5P61964 334 aaKnown RBP16.94■□□□□ 0.3
RPRD1A-208ENST00000589050 KNOP1Q1ED39 458 aaKnown RBP16.94■□□□□ 0.3
RPRD1A-208ENST00000589050 ZNF568Q3ZCX4 644 aa16.94■□□□□ 0.3
RPRD1A-208ENST00000589050 C9orf50Q5SZB4 431 aa16.94■□□□□ 0.3
RPRD1A-208ENST00000589050 SLC39A4Q6P5W5 647 aa16.94■□□□□ 0.3
RPRD1A-208ENST00000589050 MPZL3Q6UWV2 235 aa16.94■□□□□ 0.3
RPRD1A-208ENST00000589050 APBB1IPQ7Z5R6 666 aaPredicted RBP16.94■□□□□ 0.3
RPRD1A-208ENST00000589050 ZBTB33Q86T24 672 aa16.94■□□□□ 0.3
RPRD1A-208ENST00000589050 GUF1Q8N442 669 aaKnown RBP16.94■□□□□ 0.3
RPRD1A-208ENST00000589050 ZBTB45Q96K62 511 aaPredicted RBP16.94■□□□□ 0.3
RPRD1A-208ENST00000589050 TRIM6Q9C030 488 aaPredicted RBP16.94■□□□□ 0.3
RPRD1A-208ENST00000589050 GBP3Q9H0R5 595 aa16.94■□□□□ 0.3
RPRD1A-208ENST00000589050 PTPRHQ9HD43 1115 aa16.94■□□□□ 0.3
RPRD1A-208ENST00000589050 FAM105AQ9NUU6 356 aa16.94■□□□□ 0.3
RPRD1A-208ENST00000589050 MYH11P35749 1972 aa16.94■□□□□ 0.3
RPRD1A-208ENST00000589050 A0A0U1RQF3 1178 aa16.93■□□□□ 0.3
RPRD1A-208ENST00000589050 C9IYK1 514 aa16.93■□□□□ 0.3
RPRD1A-208ENST00000589050 CLDN3O15551 220 aa16.93■□□□□ 0.3
RPRD1A-208ENST00000589050 HARSP12081 509 aaKnown RBP16.93■□□□□ 0.3
RPRD1A-208ENST00000589050 SKIP12755 728 aa16.93■□□□□ 0.3
RPRD1A-208ENST00000589050 PROZP22891 400 aa16.93■□□□□ 0.3
RPRD1A-208ENST00000589050 PRCPP42785 496 aa16.93■□□□□ 0.3
RPRD1A-208ENST00000589050 DEFB103AP81534 67 aa16.93■□□□□ 0.3
RPRD1A-208ENST00000589050 SHHQ15465 462 aa16.93■□□□□ 0.3
RPRD1A-208ENST00000589050 DCAF4L1Q3SXM0 396 aa16.93■□□□□ 0.3
RPRD1A-208ENST00000589050 COBLL1Q53SF7 1204 aa16.93■□□□□ 0.3
RPRD1A-208ENST00000589050 RNF169Q8NCN4 708 aa16.93■□□□□ 0.3
RPRD1A-208ENST00000589050 RNPC3Q96LT9 517 aaKnown RBP16.93■□□□□ 0.3
RPRD1A-208ENST00000589050 TRAIPQ9BWF2 469 aa16.93■□□□□ 0.3
RPRD1A-208ENST00000589050 CDT1Q9H211 546 aa16.93■□□□□ 0.3
RPRD1A-208ENST00000589050 CXXC1Q9P0U4 656 aaPredicted RBP16.93■□□□□ 0.3
RPRD1A-208ENST00000589050 PCDHB2Q9Y5E7 798 aa16.93■□□□□ 0.3
RPRD1A-208ENST00000589050 TNRC18O15417 2968 aaPredicted RBP16.92■□□□□ 0.3
RPRD1A-208ENST00000589050 ABLIM1O14639 778 aa16.92■□□□□ 0.3
RPRD1A-208ENST00000589050 TGFB1I1O43294 461 aa16.92■□□□□ 0.3
RPRD1A-208ENST00000589050 MCF2P10911 925 aa16.92■□□□□ 0.3
RPRD1A-208ENST00000589050 BMP8BP34820 402 aa16.92■□□□□ 0.3
RPRD1A-208ENST00000589050 FAM189BP81408 668 aa16.92■□□□□ 0.3
RPRD1A-208ENST00000589050 MCL1Q07820 350 aa16.92■□□□□ 0.3
RPRD1A-208ENST00000589050 STIM1Q13586 685 aa16.92■□□□□ 0.3
RPRD1A-208ENST00000589050 NOLC1Q14978 699 aaKnown RBP eCLIP16.92■□□□□ 0.37e-8■■■■□ 24.9
RPRD1A-208ENST00000589050 SLFN12LQ6IEE8 588 aa16.92■□□□□ 0.3
RPRD1A-208ENST00000589050 HS2ST1Q7LGA3 356 aa16.92■□□□□ 0.3
RPRD1A-208ENST00000589050 ECHDC2Q86YB7 292 aa16.92■□□□□ 0.3
RPRD1A-208ENST00000589050 ADSSL1Q8N142 457 aa16.92■□□□□ 0.3
RPRD1A-208ENST00000589050 LRFN2Q9ULH4 789 aa16.92■□□□□ 0.3
RPRD1A-208ENST00000589050 IPPQ9Y573 584 aa16.92■□□□□ 0.3
RPRD1A-208ENST00000589050 SLC4A7Q9Y6M7 1214 aa16.92■□□□□ 0.3
RPRD1A-208ENST00000589050 CD44P16070 742 aaKnown RBP16.91■□□□□ 0.3
RPRD1A-208ENST00000589050 ADSSP30520 456 aa16.91■□□□□ 0.3
RPRD1A-208ENST00000589050 PPP1R2P41236 205 aa16.91■□□□□ 0.3
RPRD1A-208ENST00000589050 NLRP12P59046 1061 aa16.91■□□□□ 0.3
RPRD1A-208ENST00000589050 RASIP1Q5U651 963 aa16.91■□□□□ 0.3
RPRD1A-208ENST00000589050 ARMCX5Q6P1M9 558 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms