RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 NEDD9Q14511 834 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 MTERF2Q49AM1 385 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 PRRT2Q7Z6L0 340 aaPredicted RBP16.51■□□□□ 0.23
MBD1-217ENST00000588937 ARHGEF19Q8IW93 802 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 UBE2Q2Q8WVN8 375 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 BICD1Q96G01 975 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 MS4A14Q96JA4 679 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 FAM81BQ96LP2 452 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 SPATC1LQ9H0A9 340 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 SEPT11Q9NVA2 429 aaKnown RBP16.51■□□□□ 0.23
MBD1-217ENST00000588937 STIM2Q9P246 746 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 KCNK3O14649 394 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 TGFB3P10600 412 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 TNNT3P45378 269 aaPredicted RBP16.51■□□□□ 0.23
MBD1-217ENST00000588937 GPC3P51654 580 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 TNNC1P63316 161 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 SP2Q02086 613 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 CNTN2Q02246 1040 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 CYP24A1Q07973 514 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 STRN3Q13033 797 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 EMC2Q15006 297 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 HSP90B2PQ58FF3 399 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 SEPT14Q6ZU15 432 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 ERO1BQ86YB8 467 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 ZSWIM2Q8NEG5 633 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 OLIG1Q8TAK6 271 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 ACTRT1Q8TDG2 376 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 SAAL1Q96ER3 474 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 NIFKQ9BYG3 293 aaKnown RBP16.51■□□□□ 0.23
MBD1-217ENST00000588937 ST7Q9NRC1 585 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 RBM12Q9NTZ6 932 aaKnown RBP16.51■□□□□ 0.23
MBD1-217ENST00000588937 BTBD7Q9P203 1132 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 AMFRQ9UKV5 643 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 PACSIN2Q9UNF0 486 aaPredicted RBP16.51■□□□□ 0.23
MBD1-217ENST00000588937 SYNGAP1Q96PV0 1343 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 UNCXA6NJT0 531 aa16.5■□□□□ 0.23
MBD1-217ENST00000588937 SLC25A27O95847 323 aa16.5■□□□□ 0.23
MBD1-217ENST00000588937 EDNRBP24530 442 aa16.5■□□□□ 0.23
MBD1-217ENST00000588937 DNA2P51530 1060 aa16.5■□□□□ 0.23
MBD1-217ENST00000588937 MAP2K1Q02750 393 aaPredicted RBP16.5■□□□□ 0.23
MBD1-217ENST00000588937 FAM160B1Q5W0V3 765 aa16.5■□□□□ 0.23
MBD1-217ENST00000588937 SLC39A4Q6P5W5 647 aa16.5■□□□□ 0.23
MBD1-217ENST00000588937 DAAM2Q86T65 1068 aa16.5■□□□□ 0.23
MBD1-217ENST00000588937 NCAPG2Q86XI2 1143 aa16.5■□□□□ 0.23
MBD1-217ENST00000588937 RHOT2Q8IXI1 618 aa16.5■□□□□ 0.23
MBD1-217ENST00000588937 ANKRD13AQ8IZ07 590 aa16.5■□□□□ 0.23
MBD1-217ENST00000588937 FBXL13Q8NEE6 735 aa16.5■□□□□ 0.23
MBD1-217ENST00000588937 CCDC127Q96BQ5 260 aa16.5■□□□□ 0.23
MBD1-217ENST00000588937 CDCA5Q96FF9 252 aa16.5■□□□□ 0.23
MBD1-217ENST00000588937 SUGCTQ9HAC7 445 aa16.5■□□□□ 0.23
MBD1-217ENST00000588937 PDE11AQ9HCR9 933 aa16.5■□□□□ 0.23
MBD1-217ENST00000588937 MED4Q9NPJ6 270 aa16.5■□□□□ 0.23
MBD1-217ENST00000588937 NRBP2Q9NSY0 501 aa16.5■□□□□ 0.23
MBD1-217ENST00000588937 EHD2Q9NZN4 543 aa16.5■□□□□ 0.23
MBD1-217ENST00000588937 DIS3Q9Y2L1 958 aaKnown RBP16.5■□□□□ 0.23
MBD1-217ENST00000588937 PPME1Q9Y570 386 aa16.5■□□□□ 0.23
MBD1-217ENST00000588937 IGKV6D-21A0A0A0MT36 114 aa16.49■□□□□ 0.23
MBD1-217ENST00000588937 ZNF233A6NK53 670 aa16.49■□□□□ 0.23
MBD1-217ENST00000588937 LRRIQ3A6PVS8 624 aaPredicted RBP16.49■□□□□ 0.23
MBD1-217ENST00000588937 TMCO5BA8MYB1 307 aa16.49■□□□□ 0.23
MBD1-217ENST00000588937 IRF6O14896 467 aa16.49■□□□□ 0.23
MBD1-217ENST00000588937 RFC5P40937 340 aa16.49■□□□□ 0.23
MBD1-217ENST00000588937 NAMPTP43490 491 aa16.49■□□□□ 0.23
MBD1-217ENST00000588937 LIG4P49917 911 aa16.49■□□□□ 0.23
MBD1-217ENST00000588937 SOX10P56693 466 aa16.49■□□□□ 0.23
MBD1-217ENST00000588937 ENOSF1Q7L5Y1 443 aa16.49■□□□□ 0.23
MBD1-217ENST00000588937 IFT20Q8IY31 132 aa16.49■□□□□ 0.23
MBD1-217ENST00000588937 FAM71AQ8IYT1 594 aa16.49■□□□□ 0.23
MBD1-217ENST00000588937 USP38Q8NB14 1042 aa16.49■□□□□ 0.23
MBD1-217ENST00000588937 SLC35G2Q8TBE7 412 aa16.49■□□□□ 0.23
MBD1-217ENST00000588937 SLC7A3Q8WY07 619 aa16.49■□□□□ 0.23
MBD1-217ENST00000588937 NT5C1BQ96P26 610 aa16.49■□□□□ 0.23
MBD1-217ENST00000588937 PORCNQ9H237 461 aa16.49■□□□□ 0.23
MBD1-217ENST00000588937 DHX33Q9H6R0 707 aaKnown RBP16.49■□□□□ 0.23
MBD1-217ENST00000588937 SMARCAL1Q9NZC9 954 aa16.49■□□□□ 0.23
MBD1-217ENST00000588937 STXBP5LQ9Y2K9 1186 aa16.49■□□□□ 0.23
MBD1-217ENST00000588937 POLR3GO15318 223 aaPredicted RBP16.49■□□□□ 0.23
MBD1-217ENST00000588937 EXTL3O43909 919 aa16.49■□□□□ 0.23
MBD1-217ENST00000588937 ZC3H11AO75152 810 aaKnown RBP eCLIP16.49■□□□□ 0.23
MBD1-217ENST00000588937 SLFN12LQ6IEE8 588 aa16.49■□□□□ 0.23
MBD1-217ENST00000588937 NT5DC3Q86UY8 548 aa16.49■□□□□ 0.23
MBD1-217ENST00000588937 ADGRA3Q8IWK6 1321 aa16.49■□□□□ 0.23
MBD1-217ENST00000588937 PPM1KQ8N3J5 372 aa16.49■□□□□ 0.23
MBD1-217ENST00000588937 RAB20Q9NX57 234 aa16.49■□□□□ 0.23
MBD1-217ENST00000588937 DMGDHQ9UI17 866 aaKnown RBP16.49■□□□□ 0.23
MBD1-217ENST00000588937 PGRMC1O00264 195 aaKnown RBP16.48■□□□□ 0.23
MBD1-217ENST00000588937 SORBS3O60504 671 aa16.48■□□□□ 0.23
MBD1-217ENST00000588937 RTN2O75298 545 aa16.48■□□□□ 0.23
MBD1-217ENST00000588937 ZMYND10O75800 440 aa16.48■□□□□ 0.23
MBD1-217ENST00000588937 GZMAP12544 262 aa16.48■□□□□ 0.23
MBD1-217ENST00000588937 ATP4AP20648 1035 aa16.48■□□□□ 0.23
MBD1-217ENST00000588937 ABCB4P21439 1286 aa16.48■□□□□ 0.23
MBD1-217ENST00000588937 UBA1P22314 1058 aaKnown RBP16.48■□□□□ 0.23
MBD1-217ENST00000588937 USP8P40818 1118 aa16.48■□□□□ 0.23
MBD1-217ENST00000588937 EPHB4P54760 987 aa16.48■□□□□ 0.23
MBD1-217ENST00000588937 HADHBP55084 474 aaKnown RBP16.48■□□□□ 0.23
MBD1-217ENST00000588937 TCEAL1Q15170 157 aa16.48■□□□□ 0.23
MBD1-217ENST00000588937 EMBQ6PCB8 327 aa16.48■□□□□ 0.23
MBD1-217ENST00000588937 KCNV1Q6PIU1 500 aa16.48■□□□□ 0.23
MBD1-217ENST00000588937 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms