RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 HNRNPDLO14979 420 aaKnown RBP9.53□□□□□ -0.88
SMAD4-206ENST00000588860 MAPK13O15264 365 aa9.53□□□□□ -0.88
SMAD4-206ENST00000588860 KRT86O43790 486 aa9.53□□□□□ -0.88
SMAD4-206ENST00000588860 TLR2O60603 784 aa9.53□□□□□ -0.88
SMAD4-206ENST00000588860 LCA5LO95447 670 aa9.53□□□□□ -0.88
SMAD4-206ENST00000588860 ADRB2P07550 413 aa9.53□□□□□ -0.88
SMAD4-206ENST00000588860 GLRA2P23416 452 aa9.53□□□□□ -0.88
SMAD4-206ENST00000588860 ARL2P36404 184 aa9.53□□□□□ -0.88
SMAD4-206ENST00000588860 VAV2P52735 878 aa9.53□□□□□ -0.88
SMAD4-206ENST00000588860 DLG4P78352 724 aa9.53□□□□□ -0.88
SMAD4-206ENST00000588860 KLHL30Q0D2K2 578 aa9.53□□□□□ -0.88
SMAD4-206ENST00000588860 STRN3Q13033 797 aa9.53□□□□□ -0.88
SMAD4-206ENST00000588860 TARBP2Q15633 366 aaKnown RBP9.53□□□□□ -0.88
SMAD4-206ENST00000588860 HGSNATQ68CP4 663 aa9.53□□□□□ -0.88
SMAD4-206ENST00000588860 SLC39A4Q6P5W5 647 aa9.53□□□□□ -0.88
SMAD4-206ENST00000588860 CCDC62Q6P9F0 684 aa9.53□□□□□ -0.88
SMAD4-206ENST00000588860 GJB7Q6PEY0 223 aa9.53□□□□□ -0.88
SMAD4-206ENST00000588860 ZNF662Q6ZS27 426 aa9.53□□□□□ -0.88
SMAD4-206ENST00000588860 TRIM50Q86XT4 487 aa9.53□□□□□ -0.88
SMAD4-206ENST00000588860 ABRAQ8N0Z2 381 aa9.53□□□□□ -0.88
SMAD4-206ENST00000588860 BBXQ8WY36 941 aaPredicted RBP9.53□□□□□ -0.88
SMAD4-206ENST00000588860 KHSRPQ92945 711 aaKnown RBP eCLIP9.53□□□□□ -0.887e-7■■■□□ 16.1
SMAD4-206ENST00000588860 ERO1AQ96HE7 468 aa9.53□□□□□ -0.88
SMAD4-206ENST00000588860 CEP89Q96ST8 783 aa9.53□□□□□ -0.88
SMAD4-206ENST00000588860 NAPGQ99747 312 aaPredicted RBP9.53□□□□□ -0.88
SMAD4-206ENST00000588860 IFIH1Q9BYX4 1025 aaKnown RBP9.53□□□□□ -0.88
SMAD4-206ENST00000588860 TSGA10Q9BZW7 698 aa9.53□□□□□ -0.88
SMAD4-206ENST00000588860 VTA1Q9NP79 307 aa9.53□□□□□ -0.88
SMAD4-206ENST00000588860 AIPL1Q9NZN9 384 aa9.53□□□□□ -0.88
SMAD4-206ENST00000588860 ARHGAP28Q9P2N2 729 aa9.53□□□□□ -0.88
SMAD4-206ENST00000588860 ZNF215Q9UL58 517 aaPredicted RBP9.53□□□□□ -0.88
SMAD4-206ENST00000588860 MYO6Q9UM54 1294 aa9.53□□□□□ -0.88
SMAD4-206ENST00000588860 DIS3Q9Y2L1 958 aaKnown RBP9.53□□□□□ -0.88
SMAD4-206ENST00000588860 CTAGE9A4FU28 777 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 RCCD1A6NED2 376 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 STRNO43815 780 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 GH1P01241 217 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 GARTP22102 1010 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 SCP2P22307 547 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 CNGA1P29973 690 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 ADSSP30520 456 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 STAT1P42224 750 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 MAGEA1P43355 309 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 NAMPTP43490 491 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 GCLMP48507 274 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 LIG4P49917 911 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 HUNKP57058 714 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 JAM2P57087 298 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 GFPT1Q06210 699 aaPredicted RBP9.52□□□□□ -0.89
SMAD4-206ENST00000588860 PPP3CAQ08209 521 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 CETN1Q12798 172 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 KIF5AQ12840 1032 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 PLCB4Q15147 1175 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 SNRNP35Q16560 246 aaKnown RBP9.52□□□□□ -0.89
SMAD4-206ENST00000588860 ASTE1Q2TB18 679 aaPredicted RBP9.52□□□□□ -0.89
SMAD4-206ENST00000588860 HSDL1Q3SXM5 330 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 C1orf220Q5T0J3 134 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 TMEM63BQ5T3F8 832 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 TAS1R3Q7RTX0 852 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 PLPPR4Q7Z2D5 763 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 GPR142Q7Z601 462 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 PLEKHH3Q7Z736 793 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 DPP9Q86TI2 863 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 SAPCD2Q86UD0 394 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 RASAL3Q86YV0 1011 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 CBWD2Q8IUF1 395 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 TXLNBQ8N3L3 684 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 EHBP1Q8NDI1 1231 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 MNS1Q8NEH6 495 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 PLEKHO2Q8TD55 490 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 ATP8B4Q8TF62 1192 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 PTPN18Q99952 460 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.52□□□□□ -0.89
SMAD4-206ENST00000588860 LACRTQ9GZZ8 138 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 SMARCAD1Q9H4L7 1026 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.52□□□□□ -0.89
SMAD4-206ENST00000588860 FBXL5Q9UKA1 691 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 DNAJC12Q9UKB3 198 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 PPME1Q9Y570 386 aa9.52□□□□□ -0.89
SMAD4-206ENST00000588860 TRIP12Q14669 1992 aaPredicted RBP9.52□□□□□ -0.89
SMAD4-206ENST00000588860 CITO14578 2027 aa9.51□□□□□ -0.89
SMAD4-206ENST00000588860 MACROD2A1Z1Q3 448 aa9.51□□□□□ -0.89
SMAD4-206ENST00000588860 RBAK-RBAKDNI3L0D1 243 aa9.51□□□□□ -0.89
SMAD4-206ENST00000588860 P4HA2O15460 535 aa9.51□□□□□ -0.89
SMAD4-206ENST00000588860 MAFO75444 373 aaPredicted RBP9.51□□□□□ -0.89
SMAD4-206ENST00000588860 GFPT2O94808 682 aa9.51□□□□□ -0.89
SMAD4-206ENST00000588860 FERP16591 822 aa9.51□□□□□ -0.89
SMAD4-206ENST00000588860 MAPK4P31152 587 aa9.51□□□□□ -0.89
SMAD4-206ENST00000588860 MATR3P43243 847 aaKnown RBP eCLIP9.51□□□□□ -0.896e-9■■□□□ 12.9
SMAD4-206ENST00000588860 MXI1P50539 228 aa9.51□□□□□ -0.89
SMAD4-206ENST00000588860 ZNF157P51786 506 aaPredicted RBP9.51□□□□□ -0.89
SMAD4-206ENST00000588860 ARHGAP1Q07960 439 aa9.51□□□□□ -0.89
SMAD4-206ENST00000588860 CYP24A1Q07973 514 aa9.51□□□□□ -0.89
SMAD4-206ENST00000588860 CAPSQ13938 189 aa9.51□□□□□ -0.89
SMAD4-206ENST00000588860 GRB14Q14449 540 aa9.51□□□□□ -0.89
SMAD4-206ENST00000588860 FAM110CQ1W6H9 321 aa9.51□□□□□ -0.89
SMAD4-206ENST00000588860 EPC2Q52LR7 807 aa9.51□□□□□ -0.89
SMAD4-206ENST00000588860 BRDTQ58F21 947 aaPredicted RBP9.51□□□□□ -0.89
SMAD4-206ENST00000588860 GJC2Q5T442 439 aaPredicted RBP9.51□□□□□ -0.89
SMAD4-206ENST00000588860 IER5Q5VY09 327 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms