RNA–Protein interactions for RNA: ENST00000588802.5

APOC1-203, Transcript of apolipoprotein C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-203ENST00000588802 TRANK1O15050 2925 aa11.33□□□□□ -0.6
APOC1-203ENST00000588802 XIRP2A4UGR9 3374 aa11.33□□□□□ -0.6
APOC1-203ENST00000588802 DENND3A2RUS2 1198 aa11.32□□□□□ -0.6
APOC1-203ENST00000588802 TRIM49BA6NDI0 452 aa11.32□□□□□ -0.6
APOC1-203ENST00000588802 ZBTB42B2RXF5 422 aa11.32□□□□□ -0.6
APOC1-203ENST00000588802 LINC01565O15544 149 aa11.32□□□□□ -0.6
APOC1-203ENST00000588802 EYA4O95677 639 aa11.32□□□□□ -0.6
APOC1-203ENST00000588802 KRT18P05783 430 aaKnown RBP11.32□□□□□ -0.6
APOC1-203ENST00000588802 STAG3L1P0CL83 205 aa11.32□□□□□ -0.6
APOC1-203ENST00000588802 CLCN3P51790 818 aa11.32□□□□□ -0.6
APOC1-203ENST00000588802 UGCGQ16739 394 aa11.32□□□□□ -0.6
APOC1-203ENST00000588802 CNNM4Q6P4Q7 775 aa11.32□□□□□ -0.6
APOC1-203ENST00000588802 ADSSL1Q8N142 457 aa11.32□□□□□ -0.6
APOC1-203ENST00000588802 SYT2Q8N9I0 419 aaPredicted RBP11.32□□□□□ -0.6
APOC1-203ENST00000588802 NEK9Q8TD19 979 aa11.32□□□□□ -0.6
APOC1-203ENST00000588802 PIGOQ8TEQ8 1089 aa11.32□□□□□ -0.6
APOC1-203ENST00000588802 TRIM44Q96DX7 344 aaPredicted RBP11.32□□□□□ -0.6
APOC1-203ENST00000588802 ADAM2Q99965 735 aa11.32□□□□□ -0.6
APOC1-203ENST00000588802 HSD17B14Q9BPX1 270 aa11.32□□□□□ -0.6
APOC1-203ENST00000588802 RUSC1Q9BVN2 902 aa11.32□□□□□ -0.6
APOC1-203ENST00000588802 FGFBP2Q9BYJ0 223 aa11.32□□□□□ -0.6
APOC1-203ENST00000588802 LRRC27Q9C0I9 530 aa11.32□□□□□ -0.6
APOC1-203ENST00000588802 RC3H2Q9HBD1 1191 aaKnown RBP11.32□□□□□ -0.6
APOC1-203ENST00000588802 ERVK-5Q9HDB9 667 aa11.32□□□□□ -0.6
APOC1-203ENST00000588802 SLC39A2Q9NP94 309 aa11.32□□□□□ -0.6
APOC1-203ENST00000588802 HCSTQ9UBK5 93 aa11.32□□□□□ -0.6
APOC1-203ENST00000588802 ST3GAL5Q9UNP4 418 aa11.32□□□□□ -0.6
APOC1-203ENST00000588802 DNM3Q9UQ16 869 aa11.32□□□□□ -0.6
APOC1-203ENST00000588802 AKT3Q9Y243 479 aa11.32□□□□□ -0.6
APOC1-203ENST00000588802 PCDHB7Q9Y5E2 793 aa11.32□□□□□ -0.6
APOC1-203ENST00000588802 PCDHGC5Q9Y5F6 944 aa11.32□□□□□ -0.6
APOC1-203ENST00000588802 PCDHA10Q9Y5I2 948 aa11.32□□□□□ -0.6
APOC1-203ENST00000588802 MYH9P35579 1960 aaKnown RBP11.32□□□□□ -0.6
APOC1-203ENST00000588802 COL1A2P08123 1366 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 PVALEFA0A1B0GWK0 134 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 GRXCR2A6NFK2 248 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 TBKBP1A7MCY6 615 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 ZBTB39O15060 712 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 SLITRK3O94933 977 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 C22orf31O95567 290 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 ITGB1P05556 798 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 ZNF18P17022 549 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 DNAJB1P25685 340 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 CDC25BP30305 580 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 IRS1P35568 1242 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 PMS1P54277 932 aaKnown RBP11.31□□□□□ -0.6
APOC1-203ENST00000588802 DLX2Q07687 328 aaPredicted RBP11.31□□□□□ -0.6
APOC1-203ENST00000588802 HYAL1Q12794 435 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 STK4Q13043 487 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 STIM1Q13586 685 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 ARSHQ5FYA8 562 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 CT47A1Q5JQC4 288 aaPredicted RBP11.31□□□□□ -0.6
APOC1-203ENST00000588802 FAM102BQ5T8I3 360 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 SPATA1Q5VX52 437 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 ZNF746Q6NUN9 644 aaPredicted RBP11.31□□□□□ -0.6
APOC1-203ENST00000588802 EFCAB12Q6NXP0 572 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.31□□□□□ -0.6
APOC1-203ENST00000588802 RBM23Q86U06 439 aaKnown RBP11.31□□□□□ -0.6
APOC1-203ENST00000588802 FAM228AQ86W67 206 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 FAM178BQ8IXR5 827 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 CMTR2Q8IYT2 770 aaKnown RBP11.31□□□□□ -0.6
APOC1-203ENST00000588802 GJD3Q8N144 294 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 KLHL23Q8NBE8 558 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 BBXQ8WY36 941 aaPredicted RBP11.31□□□□□ -0.6
APOC1-203ENST00000588802 P2RX5Q93086 422 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 PABPC5Q96DU9 382 aaKnown RBP11.31□□□□□ -0.6
APOC1-203ENST00000588802 SH2D3AQ9BRG2 576 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 LRFN3Q9BTN0 628 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 XPO4Q9C0E2 1151 aaKnown RBP11.31□□□□□ -0.6
APOC1-203ENST00000588802 BHMT2Q9H2M3 363 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 SAMSN1Q9NSI8 373 aaKnown RBP11.31□□□□□ -0.6
APOC1-203ENST00000588802 PANK4Q9NVE7 773 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 RWDD2AQ9UIY3 292 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 PLAGL2Q9UPG8 496 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 MAFBQ9Y5Q3 323 aaPredicted RBP11.31□□□□□ -0.6
APOC1-203ENST00000588802 TTC3P53804 2025 aa11.31□□□□□ -0.6
APOC1-203ENST00000588802 WDR64B1ANS9 1081 aa11.3□□□□□ -0.6
APOC1-203ENST00000588802 ZNF862O60290 1169 aa11.3□□□□□ -0.6
APOC1-203ENST00000588802 FGFR1P11362 822 aa11.3□□□□□ -0.6
APOC1-203ENST00000588802 FGFR4P22455 802 aa11.3□□□□□ -0.6
APOC1-203ENST00000588802 JAK3P52333 1124 aa11.3□□□□□ -0.6
APOC1-203ENST00000588802 NLRP11P59045 1033 aaKnown RBP11.3□□□□□ -0.6
APOC1-203ENST00000588802 EHHADHQ08426 723 aa11.3□□□□□ -0.6
APOC1-203ENST00000588802 TPD52L1Q16890 204 aaPredicted RBP11.3□□□□□ -0.6
APOC1-203ENST00000588802 FAM26FQ5R3K3 315 aa11.3□□□□□ -0.6
APOC1-203ENST00000588802 ADGRD2Q7Z7M1 963 aa11.3□□□□□ -0.6
APOC1-203ENST00000588802 SFR1Q86XK3 245 aa11.3□□□□□ -0.6
APOC1-203ENST00000588802 CCDC65Q8IXS2 484 aa11.3□□□□□ -0.6
APOC1-203ENST00000588802 DRC7Q8IY82 874 aa11.3□□□□□ -0.6
APOC1-203ENST00000588802 SMAP1Q8IYB5 467 aaPredicted RBP11.3□□□□□ -0.6
APOC1-203ENST00000588802 RNF169Q8NCN4 708 aa11.3□□□□□ -0.6
APOC1-203ENST00000588802 GLIS3Q8NEA6 775 aa11.3□□□□□ -0.6
APOC1-203ENST00000588802 SPPL3Q8TCT6 385 aa11.3□□□□□ -0.6
APOC1-203ENST00000588802 MICAL1Q8TDZ2 1067 aa11.3□□□□□ -0.6
APOC1-203ENST00000588802 POF1BQ8WVV4 589 aa11.3□□□□□ -0.6
APOC1-203ENST00000588802 PPP2R3CQ969Q6 453 aa11.3□□□□□ -0.6
APOC1-203ENST00000588802 MRFAP1L1Q96HT8 127 aa11.3□□□□□ -0.6
APOC1-203ENST00000588802 SCLT1Q96NL6 688 aa11.3□□□□□ -0.6
APOC1-203ENST00000588802 REEP2Q9BRK0 252 aa11.3□□□□□ -0.6
APOC1-203ENST00000588802 ZHX3Q9H4I2 956 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms