RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 ACKR2O00590 384 aa11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 P4HA2O15460 535 aa11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 N4BP1O75113 896 aaKnown RBP11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 RPLP2P05387 115 aaKnown RBP11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 SKILP12757 684 aa11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 TRIM21P19474 475 aaKnown RBP11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 CLCN3P51790 818 aa11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 VAMP7P51809 220 aa11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 PURAQ00577 322 aaKnown RBP11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 BEX3Q00994 111 aa11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 NCBP1Q09161 790 aaKnown RBP11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 DRP2Q13474 957 aa11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 NFRKBQ6P4R8 1299 aa11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 GBP6Q6ZN66 633 aa11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 TAS1R3Q7RTX0 852 aa11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 SRGAP1Q7Z6B7 1085 aa11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 ZNF410Q86VK4 478 aa11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 GPD1LQ8N335 351 aa11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 C7orf31Q8N865 590 aa11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 RDH13Q8NBN7 331 aa11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 NEK11Q8NG66 645 aa11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 OR8K1Q8NGG5 319 aa11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 TMC2Q8TDI7 906 aa11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 FBXL18Q96ME1 805 aa11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 CBWD1Q9BRT8 395 aa11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 NUCKS1Q9H1E3 243 aaKnown RBP11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 FZD8Q9H461 694 aa11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 MMRN2Q9H8L6 949 aa11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 XPNPEP3Q9NQH7 507 aa11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 SETD4Q9NVD3 440 aa11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 ZNHIT6Q9NWK9 470 aaKnown RBP11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 DAAM1Q9Y4D1 1078 aa11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 C17orf102A2RUQ5 167 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 MBLAC1A4D2B0 266 aaPredicted RBP11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 INO80B-WBP1J3KQ70 363 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 PMM2O15305 246 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 CLDN3O15551 220 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 EXTL3O43909 919 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 TOM1L1O75674 476 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 CABYRO75952 493 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 PRKCBP05771 671 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 HSPA1AP0DMV8 641 aaKnown RBP11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 HSPA1BP0DMV9 641 aaKnown RBP11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 CYP2C9P11712 490 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 ELNP15502 786 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 ADSSP30520 456 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 CASP14P31944 242 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 GTF2H1P32780 548 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 KRT9P35527 623 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 MATR3P43243 847 aaKnown RBP eCLIP11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 CHMP4BP1P59074 171 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 ZBED6P86452 979 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 BFSP1Q12934 665 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 PCBP1Q15365 356 aaKnown RBP eCLIP11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 FAM187BQ17R55 369 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 DCAF17Q5H9S7 520 aaPredicted RBP11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 MARCH8Q5T0T0 291 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 MAP3K21Q5TCX8 1036 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 RNF180Q86T96 592 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 KIAA0319LQ8IZA0 1049 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 TC2NQ8N9U0 490 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 ZNF296Q8WUU4 475 aaPredicted RBP11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 SLC35C1Q96A29 364 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 PRIMPOLQ96LW4 560 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 MFSD14AQ96MC6 490 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 NLRP4Q96MN2 994 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 BAG1Q99933 345 aaPredicted RBP11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 TCHPQ9BT92 498 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 TARS2Q9BW92 718 aaKnown RBP11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 CCDC113Q9H0I3 377 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 IKZF4Q9H2S9 585 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 TMX1Q9H3N1 280 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 HMX1Q9NP08 348 aaPredicted RBP11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 PLCB1Q9NQ66 1216 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 AGO2Q9UKV8 859 aaKnown RBP11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 SIK3Q9Y2K2 1263 aa11.44□□□□□ -0.58
CHMP1B-202ENST00000588284 A0A0B4J269 797 aa11.43□□□□□ -0.58
CHMP1B-202ENST00000588284 MFAP3LO75121 409 aa11.43□□□□□ -0.58
CHMP1B-202ENST00000588284 GYPCP04921 128 aa11.43□□□□□ -0.58
CHMP1B-202ENST00000588284 CST5P28325 142 aaPredicted RBP11.43□□□□□ -0.58
CHMP1B-202ENST00000588284 KCNJ6P48051 423 aa11.43□□□□□ -0.58
CHMP1B-202ENST00000588284 FMO5P49326 533 aa11.43□□□□□ -0.58
CHMP1B-202ENST00000588284 ADKP55263 362 aaKnown RBP11.43□□□□□ -0.58
CHMP1B-202ENST00000588284 ADAM17P78536 824 aa11.43□□□□□ -0.58
CHMP1B-202ENST00000588284 POU5F1Q01860 360 aaKnown RBP11.43□□□□□ -0.58
CHMP1B-202ENST00000588284 KCNMA1Q12791 1236 aa11.43□□□□□ -0.58
CHMP1B-202ENST00000588284 TRIM32Q13049 653 aa11.43□□□□□ -0.58
CHMP1B-202ENST00000588284 PRPF4BQ13523 1007 aaKnown RBP11.43□□□□□ -0.58
CHMP1B-202ENST00000588284 SURF1Q15526 300 aa11.43□□□□□ -0.58
CHMP1B-202ENST00000588284 SNRNP35Q16560 246 aaKnown RBP11.43□□□□□ -0.58
CHMP1B-202ENST00000588284 KYAT1Q16773 422 aa11.43□□□□□ -0.58
CHMP1B-202ENST00000588284 EXOC3L4Q17RC7 722 aa11.43□□□□□ -0.58
CHMP1B-202ENST00000588284 TMEM132AQ24JP5 1023 aa11.43□□□□□ -0.58
CHMP1B-202ENST00000588284 TAF2Q6P1X5 1199 aa11.43□□□□□ -0.58
CHMP1B-202ENST00000588284 SLC39A4Q6P5W5 647 aa11.43□□□□□ -0.58
CHMP1B-202ENST00000588284 TSHZ1Q6ZSZ6 1077 aa11.43□□□□□ -0.58
CHMP1B-202ENST00000588284 APBB1IPQ7Z5R6 666 aaPredicted RBP11.43□□□□□ -0.58
CHMP1B-202ENST00000588284 TMTC1Q8IUR5 882 aa11.43□□□□□ -0.58
CHMP1B-202ENST00000588284 KLHDC9Q8NEP7 349 aa11.43□□□□□ -0.58
CHMP1B-202ENST00000588284 LMBR1Q8WVP7 490 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms