RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 FRMD7Q6ZUT3 714 aa5.97□□□□□ -1.45
VMP1-205ENST00000587470 FKBP9P1Q75LS8 142 aa5.97□□□□□ -1.45
VMP1-205ENST00000587470 ELOA2Q8IYF1 753 aaPredicted RBP5.97□□□□□ -1.45
VMP1-205ENST00000587470 MDGA1Q8NFP4 955 aa5.97□□□□□ -1.45
VMP1-205ENST00000587470 ZNF483Q8TF39 744 aaPredicted RBP5.97□□□□□ -1.45
VMP1-205ENST00000587470 GAB3Q8WWW8 586 aa5.97□□□□□ -1.45
VMP1-205ENST00000587470 MNTQ99583 582 aa5.97□□□□□ -1.45
VMP1-205ENST00000587470 TRIM8Q9BZR9 551 aa5.97□□□□□ -1.45
VMP1-205ENST00000587470 MMRN2Q9H8L6 949 aa5.97□□□□□ -1.45
VMP1-205ENST00000587470 ING3Q9NXR8 418 aa5.97□□□□□ -1.45
VMP1-205ENST00000587470 KCNG1Q9UIX4 513 aa5.97□□□□□ -1.45
VMP1-205ENST00000587470 USP18Q9UMW8 372 aa5.97□□□□□ -1.45
VMP1-205ENST00000587470 NUMBLQ9Y6R0 609 aa5.97□□□□□ -1.45
VMP1-205ENST00000587470 MAGI3Q5TCQ9 1506 aa5.97□□□□□ -1.45
VMP1-205ENST00000587470 NRP2O60462 931 aa5.96□□□□□ -1.46
VMP1-205ENST00000587470 ALDH1A2O94788 518 aa5.96□□□□□ -1.46
VMP1-205ENST00000587470 LY86O95711 162 aa5.96□□□□□ -1.46
VMP1-205ENST00000587470 GNAT2P19087 354 aa5.96□□□□□ -1.46
VMP1-205ENST00000587470 XPAP23025 273 aaPredicted RBP5.96□□□□□ -1.46
VMP1-205ENST00000587470 DPTQ07507 201 aa5.96□□□□□ -1.46
VMP1-205ENST00000587470 CCDC178Q5BJE1 867 aa5.96□□□□□ -1.46
VMP1-205ENST00000587470 HTR3DQ70Z44 454 aa5.96□□□□□ -1.46
VMP1-205ENST00000587470 APBB1IPQ7Z5R6 666 aaPredicted RBP5.96□□□□□ -1.46
VMP1-205ENST00000587470 PIK3C3Q8NEB9 887 aa5.96□□□□□ -1.46
VMP1-205ENST00000587470 ATXN2LQ8WWM7 1075 aaKnown RBP5.96□□□□□ -1.46
VMP1-205ENST00000587470 NEU4Q8WWR8 484 aaPredicted RBP5.96□□□□□ -1.46
VMP1-205ENST00000587470 ST8SIA2Q92186 375 aa5.96□□□□□ -1.46
VMP1-205ENST00000587470 WNT8AQ9H1J5 351 aa5.96□□□□□ -1.46
VMP1-205ENST00000587470 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.96□□□□□ -1.46
VMP1-205ENST00000587470 REXO2Q9Y3B8 237 aaKnown RBP5.96□□□□□ -1.46
VMP1-205ENST00000587470 UACAQ9BZF9 1416 aa5.96□□□□□ -1.46
VMP1-205ENST00000587470 ARAP3Q8WWN8 1544 aa5.95□□□□□ -1.46
VMP1-205ENST00000587470 KDM5BQ9UGL1 1544 aa5.95□□□□□ -1.46
VMP1-205ENST00000587470 A0A087X0B3 334 aa5.95□□□□□ -1.46
VMP1-205ENST00000587470 PRSS38A1L453 326 aa5.95□□□□□ -1.46
VMP1-205ENST00000587470 KLRG2A4D1S0 409 aaPredicted RBP5.95□□□□□ -1.46
VMP1-205ENST00000587470 GSG1L2A8MUP6 293 aa5.95□□□□□ -1.46
VMP1-205ENST00000587470 ENPP3O14638 875 aa5.95□□□□□ -1.46
VMP1-205ENST00000587470 HOXA3O43365 443 aaPredicted RBP5.95□□□□□ -1.46
VMP1-205ENST00000587470 SEC24DO94855 1032 aaPredicted RBP5.95□□□□□ -1.46
VMP1-205ENST00000587470 ADH4P08319 380 aa5.95□□□□□ -1.46
VMP1-205ENST00000587470 SLC25A3Q00325 362 aa5.95□□□□□ -1.46
VMP1-205ENST00000587470 KRTAP1-1Q07627 177 aa5.95□□□□□ -1.46
VMP1-205ENST00000587470 TOB2Q14106 344 aaPredicted RBP5.95□□□□□ -1.46
VMP1-205ENST00000587470 TAS1R1Q7RTX1 841 aa5.95□□□□□ -1.46
VMP1-205ENST00000587470 NOP9Q86U38 636 aaKnown RBP5.95□□□□□ -1.46
VMP1-205ENST00000587470 RSAD2Q8WXG1 361 aa5.95□□□□□ -1.46
VMP1-205ENST00000587470 ENKD1Q9H0I2 346 aa5.95□□□□□ -1.46
VMP1-205ENST00000587470 EMC7Q9NPA0 242 aa5.95□□□□□ -1.46
VMP1-205ENST00000587470 SLC2A4RGQ9NR83 387 aa5.95□□□□□ -1.46
VMP1-205ENST00000587470 MAPRE3Q9UPY8 281 aa5.95□□□□□ -1.46
VMP1-205ENST00000587470 WDR33Q9C0J8 1336 aaKnown RBP5.95□□□□□ -1.46
VMP1-205ENST00000587470 PHLDB1Q86UU1 1377 aa5.94□□□□□ -1.46
VMP1-205ENST00000587470 LCHNA4D1U4 455 aa5.94□□□□□ -1.46
VMP1-205ENST00000587470 RAB11FIP3O75154 756 aa5.94□□□□□ -1.46
VMP1-205ENST00000587470 STC2O76061 302 aa5.94□□□□□ -1.46
VMP1-205ENST00000587470 MYCLP1P12525 358 aaPredicted RBP5.94□□□□□ -1.46
VMP1-205ENST00000587470 NRG3P56975 720 aa5.94□□□□□ -1.46
VMP1-205ENST00000587470 PURAQ00577 322 aaKnown RBP5.94□□□□□ -1.46
VMP1-205ENST00000587470 DDB1Q16531 1140 aa5.94□□□□□ -1.46
VMP1-205ENST00000587470 BROXQ5VW32 411 aa5.94□□□□□ -1.46
VMP1-205ENST00000587470 NAIF1Q69YI7 327 aaPredicted RBP5.94□□□□□ -1.46
VMP1-205ENST00000587470 LMBR1LQ6UX01 489 aa5.94□□□□□ -1.46
VMP1-205ENST00000587470 CXorf67Q86X51 503 aaPredicted RBP5.94□□□□□ -1.46
VMP1-205ENST00000587470 MB21D1Q8N884 522 aa5.94□□□□□ -1.46
VMP1-205ENST00000587470 OR5M3Q8NGP4 307 aa5.94□□□□□ -1.46
VMP1-205ENST00000587470 LEO1Q8WVC0 666 aaPredicted RBP5.94□□□□□ -1.46
VMP1-205ENST00000587470 FDXACB1Q9BRP7 624 aaPredicted RBP5.94□□□□□ -1.46
VMP1-205ENST00000587470 MS4A5Q9H3V2 200 aa5.94□□□□□ -1.46
VMP1-205ENST00000587470 TMPRSS11EQ9UL52 423 aa5.94□□□□□ -1.46
VMP1-205ENST00000587470 RIMS1Q86UR5 1692 aaKnown RBP5.94□□□□□ -1.46
VMP1-205ENST00000587470 MED1Q15648 1581 aaPredicted RBP5.93□□□□□ -1.46
VMP1-205ENST00000587470 PTPRTO14522 1441 aa5.93□□□□□ -1.46
VMP1-205ENST00000587470 PDE8AO60658 829 aa5.93□□□□□ -1.46
VMP1-205ENST00000587470 MANFP55145 182 aaKnown RBP5.93□□□□□ -1.46
VMP1-205ENST00000587470 TAF7LQ5H9L4 462 aa5.93□□□□□ -1.46
VMP1-205ENST00000587470 DCAF17Q5H9S7 520 aaPredicted RBP5.93□□□□□ -1.46
VMP1-205ENST00000587470 RABL3Q5HYI8 236 aa5.93□□□□□ -1.46
VMP1-205ENST00000587470 CRB2Q5IJ48 1285 aa5.93□□□□□ -1.46
VMP1-205ENST00000587470 C1QL3Q5VWW1 255 aa5.93□□□□□ -1.46
VMP1-205ENST00000587470 RASSF3Q86WH2 238 aa5.93□□□□□ -1.46
VMP1-205ENST00000587470 LARP4BQ92615 738 aaKnown RBP5.93□□□□□ -1.46
VMP1-205ENST00000587470 SLC5A5Q92911 643 aa5.93□□□□□ -1.46
VMP1-205ENST00000587470 CLIP3Q96DZ5 547 aa5.93□□□□□ -1.46
VMP1-205ENST00000587470 CHFRQ96EP1 664 aa5.93□□□□□ -1.46
VMP1-205ENST00000587470 PDCD2LQ9BRP1 358 aa5.93□□□□□ -1.46
VMP1-205ENST00000587470 ANO3Q9BYT9 981 aa5.93□□□□□ -1.46
VMP1-205ENST00000587470 EPC1Q9H2F5 836 aa5.93□□□□□ -1.46
VMP1-205ENST00000587470 PRSS50Q9UI38 385 aa5.93□□□□□ -1.46
VMP1-205ENST00000587470 PPP2R3BQ9Y5P8 575 aa5.93□□□□□ -1.46
VMP1-205ENST00000587470 CFAP43Q8NDM7 1665 aa5.93□□□□□ -1.46
VMP1-205ENST00000587470 DISP1Q96F81 1524 aa5.93□□□□□ -1.46
VMP1-205ENST00000587470 UGGT2Q9NYU1 1516 aa5.93□□□□□ -1.46
VMP1-205ENST00000587470 POGZQ7Z3K3 1410 aa5.92□□□□□ -1.46
VMP1-205ENST00000587470 WDR7Q9Y4E6 1490 aa5.92□□□□□ -1.46
VMP1-205ENST00000587470 A0A1W2PR48 441 aa5.92□□□□□ -1.46
VMP1-205ENST00000587470 KDM1AO60341 852 aa5.92□□□□□ -1.46
VMP1-205ENST00000587470 CASRP41180 1078 aa5.92□□□□□ -1.46
VMP1-205ENST00000587470 INHBCP55103 352 aa5.92□□□□□ -1.46
VMP1-205ENST00000587470 WNT3AP56704 352 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms