RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 ARRDC4Q8NCT1 418 aa7.64□□□□□ -1.19
TPM4-203ENST00000586193 C1orf131Q8NDD1 294 aaKnown RBP7.64□□□□□ -1.19
TPM4-203ENST00000586193 LINC01599Q8WXQ3 324 aa7.64□□□□□ -1.19
TPM4-203ENST00000586193 SEC14L1Q92503 715 aa7.64□□□□□ -1.19
TPM4-203ENST00000586193 RAB24Q969Q5 203 aa7.64□□□□□ -1.19
TPM4-203ENST00000586193 LMBRD1Q9NUN5 540 aa7.64□□□□□ -1.19
TPM4-203ENST00000586193 STOML1Q9UBI4 398 aa7.64□□□□□ -1.19
TPM4-203ENST00000586193 PALD1Q9ULE6 856 aa7.64□□□□□ -1.19
TPM4-203ENST00000586193 EYA2O00167 538 aa7.63□□□□□ -1.19
TPM4-203ENST00000586193 ARHGEF15O94989 841 aa7.63□□□□□ -1.19
TPM4-203ENST00000586193 RPLP2P05387 115 aaKnown RBP7.63□□□□□ -1.19
TPM4-203ENST00000586193 FAHP16930 419 aa7.63□□□□□ -1.19
TPM4-203ENST00000586193 PLS1Q14651 629 aa7.63□□□□□ -1.19
TPM4-203ENST00000586193 ARL13BQ3SXY8 428 aa7.63□□□□□ -1.19
TPM4-203ENST00000586193 INTS11Q5TA45 600 aaKnown RBP7.63□□□□□ -1.19
TPM4-203ENST00000586193 HEATR3Q7Z4Q2 680 aa7.63□□□□□ -1.19
TPM4-203ENST00000586193 MILR1Q7Z6M3 343 aa7.63□□□□□ -1.19
TPM4-203ENST00000586193 RHOT1Q8IXI2 618 aa7.63□□□□□ -1.19
TPM4-203ENST00000586193 CACNA2D3Q8IZS8 1091 aa7.63□□□□□ -1.19
TPM4-203ENST00000586193 ATG16L2Q8NAA4 619 aa7.63□□□□□ -1.19
TPM4-203ENST00000586193 C3orf20Q8ND61 904 aa7.63□□□□□ -1.19
TPM4-203ENST00000586193 TRAPPC12Q8WVT3 735 aa7.63□□□□□ -1.19
TPM4-203ENST00000586193 RPGRQ92834 1020 aaKnown RBP7.63□□□□□ -1.19
TPM4-203ENST00000586193 MTFMTQ96DP5 389 aaKnown RBP7.63□□□□□ -1.19
TPM4-203ENST00000586193 C7orf25Q9BPX7 421 aa7.63□□□□□ -1.19
TPM4-203ENST00000586193 PDP2Q9P2J9 529 aa7.63□□□□□ -1.19
TPM4-203ENST00000586193 CPNE7Q9UBL6 633 aa7.63□□□□□ -1.19
TPM4-203ENST00000586193 CPA4Q9UI42 421 aa7.63□□□□□ -1.19
TPM4-203ENST00000586193 CRYL1Q9Y2S2 319 aa7.63□□□□□ -1.19
TPM4-203ENST00000586193 RAXQ9Y2V3 346 aa7.63□□□□□ -1.19
TPM4-203ENST00000586193 PCDHB6Q9Y5E3 794 aa7.63□□□□□ -1.19
TPM4-203ENST00000586193 CNTNAP5Q8WYK1 1306 aa7.62□□□□□ -1.19
TPM4-203ENST00000586193 A0A1W2PQJ5 194 aa7.62□□□□□ -1.19
TPM4-203ENST00000586193 MYO1FO00160 1098 aa7.62□□□□□ -1.19
TPM4-203ENST00000586193 EIF3FO00303 357 aaPredicted RBP7.62□□□□□ -1.19
TPM4-203ENST00000586193 OPHN1O60890 802 aa7.62□□□□□ -1.19
TPM4-203ENST00000586193 SKAP2O75563 359 aaPredicted RBP7.62□□□□□ -1.19
TPM4-203ENST00000586193 THP07101 528 aa7.62□□□□□ -1.19
TPM4-203ENST00000586193 KIR2DL1P43626 348 aaPredicted RBP7.62□□□□□ -1.19
TPM4-203ENST00000586193 KIR2DL2P43627 348 aaPredicted RBP7.62□□□□□ -1.19
TPM4-203ENST00000586193 ALDH9A1P49189 494 aa7.62□□□□□ -1.19
TPM4-203ENST00000586193 SUMO3P55854 103 aaPredicted RBP7.62□□□□□ -1.19
TPM4-203ENST00000586193 GALNT1Q10472 559 aaPredicted RBP7.62□□□□□ -1.19
TPM4-203ENST00000586193 DBPQ10586 325 aaPredicted RBP7.62□□□□□ -1.19
TPM4-203ENST00000586193 POSTNQ15063 836 aa7.62□□□□□ -1.19
TPM4-203ENST00000586193 TOMM20Q15388 145 aa7.62□□□□□ -1.19
TPM4-203ENST00000586193 TAF5Q15542 800 aa7.62□□□□□ -1.19
TPM4-203ENST00000586193 SLC35G1Q2M3R5 365 aa7.62□□□□□ -1.19
TPM4-203ENST00000586193 FKBP15Q5T1M5 1219 aa7.62□□□□□ -1.19
TPM4-203ENST00000586193 C1orf122Q6ZSJ8 110 aa7.62□□□□□ -1.19
TPM4-203ENST00000586193 DCP2Q8IU60 420 aaKnown RBP7.62□□□□□ -1.19
TPM4-203ENST00000586193 CDYL2Q8N8U2 506 aa7.62□□□□□ -1.19
TPM4-203ENST00000586193 NUP43Q8NFH3 380 aa7.62□□□□□ -1.19
TPM4-203ENST00000586193 OR10H5Q8NGA6 315 aa7.62□□□□□ -1.19
TPM4-203ENST00000586193 ZC3H10Q96K80 434 aaKnown RBP7.62□□□□□ -1.19
TPM4-203ENST00000586193 CLPTM1LQ96KA5 538 aa7.62□□□□□ -1.19
TPM4-203ENST00000586193 NOL10Q9BSC4 688 aaKnown RBP7.62□□□□□ -1.19
TPM4-203ENST00000586193 TMEM120AQ9BXJ8 343 aa7.62□□□□□ -1.19
TPM4-203ENST00000586193 AP5M1Q9H0R1 490 aa7.62□□□□□ -1.19
TPM4-203ENST00000586193 RXFP1Q9HBX9 757 aa7.62□□□□□ -1.19
TPM4-203ENST00000586193 SMC4Q9NTJ3 1288 aa7.62□□□□□ -1.19
TPM4-203ENST00000586193 GJB4Q9NTQ9 266 aa7.62□□□□□ -1.19
TPM4-203ENST00000586193 PNPOQ9NVS9 261 aa7.62□□□□□ -1.19
TPM4-203ENST00000586193 LRFN1Q9P244 771 aa7.62□□□□□ -1.19
TPM4-203ENST00000586193 ARHGAP28Q9P2N2 729 aa7.62□□□□□ -1.19
TPM4-203ENST00000586193 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.62□□□□□ -1.19
TPM4-203ENST00000586193 GJD2Q9UKL4 321 aa7.62□□□□□ -1.19
TPM4-203ENST00000586193 TOPBP1Q92547 1522 aa7.62□□□□□ -1.19
TPM4-203ENST00000586193 ISM1B1AKI9 464 aa7.61□□□□□ -1.19
TPM4-203ENST00000586193 CCER2I3L3R5 266 aa7.61□□□□□ -1.19
TPM4-203ENST00000586193 MBD4O95243 580 aa7.61□□□□□ -1.19
TPM4-203ENST00000586193 CNOT4O95628 575 aaKnown RBP7.61□□□□□ -1.19
TPM4-203ENST00000586193 MPIG6BO95866 241 aa7.61□□□□□ -1.19
TPM4-203ENST00000586193 VEGFAP15692 232 aaPredicted RBP7.61□□□□□ -1.19
TPM4-203ENST00000586193 EIF5P55010 431 aaKnown RBP7.61□□□□□ -1.19
TPM4-203ENST00000586193 MGAT2Q10469 447 aa7.61□□□□□ -1.19
TPM4-203ENST00000586193 PRKG1Q13976 671 aa7.61□□□□□ -1.19
TPM4-203ENST00000586193 SEPT2Q15019 361 aa7.61□□□□□ -1.19
TPM4-203ENST00000586193 PFKFB4Q16877 469 aa7.61□□□□□ -1.19
TPM4-203ENST00000586193 KHDC1Q4VXA5 237 aaKnown RBP7.61□□□□□ -1.19
TPM4-203ENST00000586193 FAM180BQ6P0A1 224 aa7.61□□□□□ -1.19
TPM4-203ENST00000586193 CFAP161Q6P656 301 aa7.61□□□□□ -1.19
TPM4-203ENST00000586193 CABP7Q86V35 215 aa7.61□□□□□ -1.19
TPM4-203ENST00000586193 TXLNBQ8N3L3 684 aa7.61□□□□□ -1.19
TPM4-203ENST00000586193 ZNF566Q969W8 418 aa7.61□□□□□ -1.19
TPM4-203ENST00000586193 DMRTA2Q96SC8 542 aa7.61□□□□□ -1.19
TPM4-203ENST00000586193 RMDN3Q96TC7 470 aa7.61□□□□□ -1.19
TPM4-203ENST00000586193 VRK1Q99986 396 aaPredicted RBP7.61□□□□□ -1.19
TPM4-203ENST00000586193 COLEC11Q9BWP8 271 aa7.61□□□□□ -1.19
TPM4-203ENST00000586193 MAGEH1Q9H213 219 aa7.61□□□□□ -1.19
TPM4-203ENST00000586193 RBM12Q9NTZ6 932 aaKnown RBP7.61□□□□□ -1.19
TPM4-203ENST00000586193 FTSJ1Q9UET6 329 aa7.61□□□□□ -1.19
TPM4-203ENST00000586193 ABCF2Q9UG63 623 aa7.61□□□□□ -1.19
TPM4-203ENST00000586193 HDAC9Q9UKV0 1011 aa7.61□□□□□ -1.19
TPM4-203ENST00000586193 RABGAP1Q9Y3P9 1069 aa7.61□□□□□ -1.19
TPM4-203ENST00000586193 SNX11Q9Y5W9 270 aa7.61□□□□□ -1.19
TPM4-203ENST00000586193 TAF6LQ9Y6J9 622 aa7.61□□□□□ -1.19
TPM4-203ENST00000586193 IFT140Q96RY7 1462 aa7.61□□□□□ -1.19
TPM4-203ENST00000586193 ABCC8Q09428 1581 aa7.6□□□□□ -1.19
TPM4-203ENST00000586193 TMEM265A0A087WTH1 108 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms