RNA–Protein interactions for RNA: ENST00000585941.5

LIG3-205, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-205ENST00000585941 GOLGA1Q92805 767 aa15.39■□□□□ 0.05
LIG3-205ENST00000585941 SAAL1Q96ER3 474 aa15.39■□□□□ 0.05
LIG3-205ENST00000585941 FAM81BQ96LP2 452 aa15.39■□□□□ 0.05
LIG3-205ENST00000585941 TMEM117Q9H0C3 514 aa15.39■□□□□ 0.05
LIG3-205ENST00000585941 ZCCHC17Q9NP64 241 aaKnown RBP15.39■□□□□ 0.05
LIG3-205ENST00000585941 INTUQ9ULD6 942 aa15.39■□□□□ 0.05
LIG3-205ENST00000585941 SAR1BQ9Y6B6 198 aa15.39■□□□□ 0.05
LIG3-205ENST00000585941 MYH10P35580 1976 aa15.39■□□□□ 0.05
LIG3-205ENST00000585941 ZNF236Q9UL36 1845 aa15.38■□□□□ 0.05
LIG3-205ENST00000585941 IGKV6-21A0A0C4DH24 114 aa15.38■□□□□ 0.05
LIG3-205ENST00000585941 RBM10P98175 930 aaKnown RBP15.38■□□□□ 0.05
LIG3-205ENST00000585941 ELF2Q15723 593 aa15.38■□□□□ 0.05
LIG3-205ENST00000585941 IFI16Q16666 785 aaKnown RBP15.38■□□□□ 0.05
LIG3-205ENST00000585941 GJB7Q6PEY0 223 aa15.38■□□□□ 0.05
LIG3-205ENST00000585941 ZPBP2Q6X784 338 aa15.38■□□□□ 0.05
LIG3-205ENST00000585941 PSPC1Q8WXF1 523 aaKnown RBP15.38■□□□□ 0.05
LIG3-205ENST00000585941 EMID1Q96A84 441 aaPredicted RBP15.38■□□□□ 0.05
LIG3-205ENST00000585941 C2orf40Q9H1Z8 148 aa15.38■□□□□ 0.05
LIG3-205ENST00000585941 SLC5A4Q9NY91 659 aa15.38■□□□□ 0.05
LIG3-205ENST00000585941 ERAP1Q9NZ08 941 aa15.38■□□□□ 0.05
LIG3-205ENST00000585941 TSKSQ9UJT2 592 aa15.38■□□□□ 0.05
LIG3-205ENST00000585941 TFR2Q9UP52 801 aa15.38■□□□□ 0.05
LIG3-205ENST00000585941 DUSP10Q9Y6W6 482 aa15.38■□□□□ 0.05
LIG3-205ENST00000585941 EVI5O60447 810 aa15.38■□□□□ 0.05
LIG3-205ENST00000585941 PRLRP16471 622 aa15.38■□□□□ 0.05
LIG3-205ENST00000585941 GPC3P51654 580 aa15.38■□□□□ 0.05
LIG3-205ENST00000585941 CHMP4BP1P59074 171 aa15.38■□□□□ 0.05
LIG3-205ENST00000585941 MKRN3Q13064 507 aaKnown RBP15.38■□□□□ 0.05
LIG3-205ENST00000585941 CAPSQ13938 189 aa15.38■□□□□ 0.05
LIG3-205ENST00000585941 GRB14Q14449 540 aa15.38■□□□□ 0.05
LIG3-205ENST00000585941 PLCB4Q15147 1175 aa15.38■□□□□ 0.05
LIG3-205ENST00000585941 ENOX2Q16206 610 aaKnown RBP15.38■□□□□ 0.05
LIG3-205ENST00000585941 KIAA0753Q2KHM9 967 aa15.38■□□□□ 0.05
LIG3-205ENST00000585941 ERCC6LQ2NKX8 1250 aa15.38■□□□□ 0.05
LIG3-205ENST00000585941 PHLDB3Q6NSJ2 640 aa15.38■□□□□ 0.05
LIG3-205ENST00000585941 PDCL2Q8N4E4 241 aa15.38■□□□□ 0.05
LIG3-205ENST00000585941 MSL3Q8N5Y2 521 aaKnown RBP15.38■□□□□ 0.05
LIG3-205ENST00000585941 PLEKHO2Q8TD55 490 aa15.38■□□□□ 0.05
LIG3-205ENST00000585941 RABGGTAQ92696 567 aa15.38■□□□□ 0.05
LIG3-205ENST00000585941 NAGPAQ9UK23 515 aa15.38■□□□□ 0.05
LIG3-205ENST00000585941 AJAP1Q9UKB5 411 aaPredicted RBP15.38■□□□□ 0.05
LIG3-205ENST00000585941 AGO2Q9UKV8 859 aaKnown RBP15.38■□□□□ 0.05
LIG3-205ENST00000585941 LRRIQ3A6PVS8 624 aaPredicted RBP15.37■□□□□ 0.05
LIG3-205ENST00000585941 ASAP2O43150 1006 aa15.37■□□□□ 0.05
LIG3-205ENST00000585941 ZC3H11AO75152 810 aaKnown RBP eCLIP15.37■□□□□ 0.05
LIG3-205ENST00000585941 CLDN10P78369 228 aa15.37■□□□□ 0.05
LIG3-205ENST00000585941 CKAP4Q07065 602 aaKnown RBP15.37■□□□□ 0.05
LIG3-205ENST00000585941 ARHGAP1Q07960 439 aa15.37■□□□□ 0.05
LIG3-205ENST00000585941 TFDP1Q14186 410 aa15.37■□□□□ 0.05
LIG3-205ENST00000585941 KIF22Q14807 665 aa15.37■□□□□ 0.05
LIG3-205ENST00000585941 PSMD6Q15008 389 aa15.37■□□□□ 0.05
LIG3-205ENST00000585941 TAPT1Q6NXT6 567 aa15.37■□□□□ 0.05
LIG3-205ENST00000585941 ALKBH5Q6P6C2 394 aaKnown RBP15.37■□□□□ 0.05
LIG3-205ENST00000585941 RSRC2Q7L4I2 434 aaKnown RBP15.37■□□□□ 0.05
LIG3-205ENST00000585941 GPR142Q7Z601 462 aa15.37■□□□□ 0.05
LIG3-205ENST00000585941 PLEKHH3Q7Z736 793 aa15.37■□□□□ 0.05
LIG3-205ENST00000585941 DPP9Q86TI2 863 aa15.37■□□□□ 0.05
LIG3-205ENST00000585941 ZBTB8OSQ8IWT0 167 aa15.37■□□□□ 0.05
LIG3-205ENST00000585941 GPR161Q8N6U8 529 aaKnown RBP15.37■□□□□ 0.05
LIG3-205ENST00000585941 FBXL13Q8NEE6 735 aa15.37■□□□□ 0.05
LIG3-205ENST00000585941 ZSWIM2Q8NEG5 633 aa15.37■□□□□ 0.05
LIG3-205ENST00000585941 PRPF31Q8WWY3 499 aaKnown RBP15.37■□□□□ 0.05
LIG3-205ENST00000585941 CCDC127Q96BQ5 260 aa15.37■□□□□ 0.05
LIG3-205ENST00000585941 RPGRIP1Q96KN7 1286 aa15.37■□□□□ 0.05
LIG3-205ENST00000585941 FAM213AQ9BRX8 229 aa15.37■□□□□ 0.05
LIG3-205ENST00000585941 UBE2TQ9NPD8 197 aaPredicted RBP15.37■□□□□ 0.05
LIG3-205ENST00000585941 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.37■□□□□ 0.05
LIG3-205ENST00000585941 CTAGE15A4D2H0 777 aa15.36■□□□□ 0.05
LIG3-205ENST00000585941 SLC15A5A6NIM6 579 aa15.36■□□□□ 0.05
LIG3-205ENST00000585941 CTAGE8P0CG41 777 aa15.36■□□□□ 0.05
LIG3-205ENST00000585941 MFAP3P55082 362 aa15.36■□□□□ 0.05
LIG3-205ENST00000585941 IRF5Q13568 498 aa15.36■□□□□ 0.05
LIG3-205ENST00000585941 NAA30Q147X3 362 aaPredicted RBP15.36■□□□□ 0.05
LIG3-205ENST00000585941 ZNF484Q5JVG2 852 aa15.36■□□□□ 0.05
LIG3-205ENST00000585941 CDCA2Q69YH5 1023 aaPredicted RBP15.36■□□□□ 0.05
LIG3-205ENST00000585941 ENOSF1Q7L5Y1 443 aa15.36■□□□□ 0.05
LIG3-205ENST00000585941 CTAGE6Q86UF2 777 aa15.36■□□□□ 0.05
LIG3-205ENST00000585941 GPIHBP1Q8IV16 184 aa15.36■□□□□ 0.05
LIG3-205ENST00000585941 CTAGE4Q8IX94 777 aa15.36■□□□□ 0.05
LIG3-205ENST00000585941 PPTC7Q8NI37 304 aa15.36■□□□□ 0.05
LIG3-205ENST00000585941 GPR88Q9GZN0 384 aa15.36■□□□□ 0.05
LIG3-205ENST00000585941 PDGFCQ9NRA1 345 aa15.36■□□□□ 0.05
LIG3-205ENST00000585941 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.36■□□□□ 0.05
LIG3-205ENST00000585941 NENFQ9UMX5 172 aa15.36■□□□□ 0.05
LIG3-205ENST00000585941 TRPC6Q9Y210 931 aa15.36■□□□□ 0.05
LIG3-205ENST00000585941 V9GYY5 206 aaPredicted RBP15.36■□□□□ 0.05
LIG3-205ENST00000585941 A0A0B4J269 797 aa15.35■□□□□ 0.05
LIG3-205ENST00000585941 ZBTB42B2RXF5 422 aa15.35■□□□□ 0.05
LIG3-205ENST00000585941 MOCS3O95396 460 aa15.35■□□□□ 0.05
LIG3-205ENST00000585941 ATP1A1P05023 1023 aaKnown RBP15.35■□□□□ 0.05
LIG3-205ENST00000585941 H2AFZP0C0S5 128 aa15.35■□□□□ 0.05
LIG3-205ENST00000585941 TCP1P17987 556 aaKnown RBP15.35■□□□□ 0.05
LIG3-205ENST00000585941 MARK3P27448 753 aa15.35■□□□□ 0.05
LIG3-205ENST00000585941 MAP2K1Q02750 393 aaPredicted RBP15.35■□□□□ 0.05
LIG3-205ENST00000585941 LAMTOR4Q0VGL1 99 aa15.35■□□□□ 0.05
LIG3-205ENST00000585941 ARHGAP44Q17R89 818 aa15.35■□□□□ 0.05
LIG3-205ENST00000585941 H2AFVQ71UI9 128 aa15.35■□□□□ 0.05
LIG3-205ENST00000585941 TRIM50Q86XT4 487 aa15.35■□□□□ 0.05
LIG3-205ENST00000585941 LRRN4CLQ8ND94 238 aa15.35■□□□□ 0.05
LIG3-205ENST00000585941 SLC30A5Q8TAD4 765 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms