RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, human

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAPA-208	ENST00000584796	B3GALT2	O43825	422 aa		4.25	□□□□□ -1.73
VAPA-208	ENST00000584796	GAS7	O60861	476 aa		4.25	□□□□□ -1.73
VAPA-208	ENST00000584796	ASMTL	O95671	621 aa		4.25	□□□□□ -1.73
VAPA-208	ENST00000584796	LAG3	P18627	525 aa		4.25	□□□□□ -1.73
VAPA-208	ENST00000584796	CASR	P41180	1078 aa		4.25	□□□□□ -1.73
VAPA-208	ENST00000584796	PTTG1IP	P53801	180 aa		4.25	□□□□□ -1.73
VAPA-208	ENST00000584796	TIGD2	Q4W5G0	525 aa		4.25	□□□□□ -1.73
VAPA-208	ENST00000584796	CCDC178	Q5BJE1	867 aa		4.25	□□□□□ -1.73
VAPA-208	ENST00000584796	GPR158	Q5T848	1215 aa		4.25	□□□□□ -1.73
VAPA-208	ENST00000584796	FAM83A	Q86UY5	434 aa		4.25	□□□□□ -1.73
VAPA-208	ENST00000584796	SYNPO	Q8N3V7	929 aa		4.25	□□□□□ -1.73
VAPA-208	ENST00000584796	IL17RA	Q96F46	866 aa		4.25	□□□□□ -1.73
VAPA-208	ENST00000584796	ZNF496	Q96IT1	587 aa	Predicted RBP	4.25	□□□□□ -1.73
VAPA-208	ENST00000584796	TOR3A	Q9H497	397 aa		4.25	□□□□□ -1.73
VAPA-208	ENST00000584796	ZNF768	Q9H5H4	540 aa	Known RBP	4.25	□□□□□ -1.73
VAPA-208	ENST00000584796	TNFRSF18	Q9Y5U5	241 aa		4.25	□□□□□ -1.73
VAPA-208	ENST00000584796	IFT140	Q96RY7	1462 aa		4.24	□□□□□ -1.73
VAPA-208	ENST00000584796	CENPVL1	A0A0U1RR11	272 aa		4.24	□□□□□ -1.73
VAPA-208	ENST00000584796		A0A1W2PR48	441 aa		4.24	□□□□□ -1.73
VAPA-208	ENST00000584796	ZNF891	A8MT65	544 aa	Predicted RBP	4.24	□□□□□ -1.73
VAPA-208	ENST00000584796	NUDT3	O95989	172 aa		4.24	□□□□□ -1.73
VAPA-208	ENST00000584796	GPR15	P49685	360 aa		4.24	□□□□□ -1.73
VAPA-208	ENST00000584796	FAM189B	P81408	668 aa		4.24	□□□□□ -1.73
VAPA-208	ENST00000584796	TAP1	Q03518	808 aa		4.24	□□□□□ -1.73
VAPA-208	ENST00000584796	HECTD2	Q5U5R9	776 aa		4.24	□□□□□ -1.73
VAPA-208	ENST00000584796	ESPNL	Q6ZVH7	1005 aa		4.24	□□□□□ -1.73
VAPA-208	ENST00000584796	TAS1R1	Q7RTX1	841 aa		4.24	□□□□□ -1.73
VAPA-208	ENST00000584796	GPRIN1	Q7Z2K8	1008 aa		4.24	□□□□□ -1.73
VAPA-208	ENST00000584796	NXPE1	Q8N323	547 aa		4.24	□□□□□ -1.73
VAPA-208	ENST00000584796	MSL3	Q8N5Y2	521 aa	Known RBP	4.24	□□□□□ -1.73
VAPA-208	ENST00000584796	LILRA3	Q8N6C8	439 aa	Predicted RBP	4.24	□□□□□ -1.73
VAPA-208	ENST00000584796	OR5M3	Q8NGP4	307 aa		4.24	□□□□□ -1.73
VAPA-208	ENST00000584796	CHTF18	Q8WVB6	975 aa		4.24	□□□□□ -1.73
VAPA-208	ENST00000584796	MRFAP1L1	Q96HT8	127 aa		4.24	□□□□□ -1.73
VAPA-208	ENST00000584796	NDC1	Q9BTX1	674 aa		4.24	□□□□□ -1.73
VAPA-208	ENST00000584796	MTFR1L	Q9H019	292 aa		4.24	□□□□□ -1.73
VAPA-208	ENST00000584796	IFT57	Q9NWB7	429 aa		4.24	□□□□□ -1.73
VAPA-208	ENST00000584796	EIF2B4	Q9UI10	523 aa	Known RBP	4.24	□□□□□ -1.73
VAPA-208	ENST00000584796	MSRA	Q9UJ68	235 aa		4.24	□□□□□ -1.73
VAPA-208	ENST00000584796	CHST2	Q9Y4C5	530 aa		4.24	□□□□□ -1.73
VAPA-208	ENST00000584796	PBRM1	Q86U86	1689 aa		4.24	□□□□□ -1.73
VAPA-208	ENST00000584796	WDR97	A6NE52	1622 aa		4.24	□□□□□ -1.73
VAPA-208	ENST00000584796	TSPOAP1	O95153	1857 aa		4.24	□□□□□ -1.73
VAPA-208	ENST00000584796	RSF1	Q96T23	1441 aa	Predicted RBP	4.23	□□□□□ -1.73
VAPA-208	ENST00000584796	ST20-MTHFS	A0A0A6YYL1	179 aa		4.23	□□□□□ -1.73
VAPA-208	ENST00000584796	TMEM200C	A6NKL6	621 aa		4.23	□□□□□ -1.73
VAPA-208	ENST00000584796	NRP2	O60462	931 aa		4.23	□□□□□ -1.73
VAPA-208	ENST00000584796	KPNA6	O60684	536 aa		4.23	□□□□□ -1.73
VAPA-208	ENST00000584796	APOBEC3A	P31941	199 aa	Predicted RBP	4.23	□□□□□ -1.73
VAPA-208	ENST00000584796	GZMK	P49863	264 aa		4.23	□□□□□ -1.73
VAPA-208	ENST00000584796	PHC1	P78364	1004 aa		4.23	□□□□□ -1.73
VAPA-208	ENST00000584796	DUSP2	Q05923	314 aa		4.23	□□□□□ -1.73
VAPA-208	ENST00000584796		Q6YL49	198 aa		4.23	□□□□□ -1.73
VAPA-208	ENST00000584796	PASD1	Q8IV76	773 aa		4.23	□□□□□ -1.73
VAPA-208	ENST00000584796	BEND2	Q8NDZ0	799 aa		4.23	□□□□□ -1.73
VAPA-208	ENST00000584796	NTN5	Q8WTR8	489 aa	Predicted RBP	4.23	□□□□□ -1.73
VAPA-208	ENST00000584796	GAB3	Q8WWW8	586 aa		4.23	□□□□□ -1.73
VAPA-208	ENST00000584796	FERMT2	Q96AC1	680 aa		4.23	□□□□□ -1.73
VAPA-208	ENST00000584796	FAM193B	Q96PV7	902 aa	Predicted RBP	4.23	□□□□□ -1.73
VAPA-208	ENST00000584796	EPC1	Q9H2F5	836 aa		4.23	□□□□□ -1.73
VAPA-208	ENST00000584796	THG1L	Q9NWX6	298 aa	Known RBP	4.23	□□□□□ -1.73
VAPA-208	ENST00000584796	DKK2	Q9UBU2	259 aa		4.23	□□□□□ -1.73
VAPA-208	ENST00000584796	RAD54L2	Q9Y4B4	1467 aa		4.23	□□□□□ -1.73
VAPA-208	ENST00000584796	DNMBP	Q6XZF7	1577 aa		4.23	□□□□□ -1.73
VAPA-208	ENST00000584796	TOP2A	P11388	1531 aa	Known RBP	4.22	□□□□□ -1.73
VAPA-208	ENST00000584796	GAGE12B	A1L429	117 aa		4.22	□□□□□ -1.73
VAPA-208	ENST00000584796	GAGE12H	A6NDE8	117 aa		4.22	□□□□□ -1.73
VAPA-208	ENST00000584796	LPXN	O60711	386 aa		4.22	□□□□□ -1.73
VAPA-208	ENST00000584796	ZEB1	P37275	1124 aa	Predicted RBP	4.22	□□□□□ -1.73
VAPA-208	ENST00000584796	TCEA2	Q15560	299 aa		4.22	□□□□□ -1.73
VAPA-208	ENST00000584796	CCDC142	Q17RM4	750 aa		4.22	□□□□□ -1.73
VAPA-208	ENST00000584796	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.22	□□□□□ -1.73
VAPA-208	ENST00000584796	OLFML1	Q6UWY5	402 aa		4.22	□□□□□ -1.73
VAPA-208	ENST00000584796	GDF7	Q7Z4P5	450 aa		4.22	□□□□□ -1.73
VAPA-208	ENST00000584796	LYSMD2	Q8IV50	215 aa		4.22	□□□□□ -1.73
VAPA-208	ENST00000584796	ARHGEF19	Q8IW93	802 aa		4.22	□□□□□ -1.73
VAPA-208	ENST00000584796	ZNF610	Q8N9Z0	462 aa		4.22	□□□□□ -1.73
VAPA-208	ENST00000584796	SMC1B	Q8NDV3	1235 aa		4.22	□□□□□ -1.73
VAPA-208	ENST00000584796	SREK1	Q8WXA9	508 aa	Known RBP	4.22	□□□□□ -1.73
VAPA-208	ENST00000584796	ZNF764	Q96H86	408 aa	Predicted RBP	4.22	□□□□□ -1.73
VAPA-208	ENST00000584796	DCLRE1C	Q96SD1	692 aa	Known RBP	4.22	□□□□□ -1.73
VAPA-208	ENST00000584796	SYNPO2L	Q9H987	977 aa		4.22	□□□□□ -1.73
VAPA-208	ENST00000584796	TMPRSS11E	Q9UL52	423 aa		4.22	□□□□□ -1.73
VAPA-208	ENST00000584796	USP18	Q9UMW8	372 aa		4.22	□□□□□ -1.73
VAPA-208	ENST00000584796	CLCA2	Q9UQC9	943 aa		4.22	□□□□□ -1.73
VAPA-208	ENST00000584796	SNAPC4	Q5SXM2	1469 aa		4.22	□□□□□ -1.73
VAPA-208	ENST00000584796	PRSS38	A1L453	326 aa		4.21	□□□□□ -1.74
VAPA-208	ENST00000584796	ZAR1L	A6NP61	321 aa		4.21	□□□□□ -1.74
VAPA-208	ENST00000584796	LEFTY2	O00292	366 aa		4.21	□□□□□ -1.74
VAPA-208	ENST00000584796	RNASET2	O00584	256 aa	Known RBP	4.21	□□□□□ -1.74
VAPA-208	ENST00000584796	ZSCAN20	P17040	1043 aa	Predicted RBP	4.21	□□□□□ -1.74
VAPA-208	ENST00000584796	NEK4	P51957	841 aa		4.21	□□□□□ -1.74
VAPA-208	ENST00000584796	KPNA1	P52294	538 aa	Predicted RBP	4.21	□□□□□ -1.74
VAPA-208	ENST00000584796	NRG3	P56975	720 aa		4.21	□□□□□ -1.74
VAPA-208	ENST00000584796	CSRP2	Q16527	193 aa		4.21	□□□□□ -1.74
VAPA-208	ENST00000584796	BEAN1	Q3B7T3	259 aa		4.21	□□□□□ -1.74
VAPA-208	ENST00000584796	LMBR1L	Q6UX01	489 aa		4.21	□□□□□ -1.74
VAPA-208	ENST00000584796	BTNL9	Q6UXG8	535 aa		4.21	□□□□□ -1.74
VAPA-208	ENST00000584796	LRRTM3	Q86VH5	581 aa		4.21	□□□□□ -1.74
VAPA-208	ENST00000584796	XYLT1	Q86Y38	959 aa		4.21	□□□□□ -1.74

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