RNA–Protein interactions for RNA: ENST00000584668.5

SRSF1-207, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 758 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-207ENST00000584668 TRIM6Q9C030 488 aaPredicted RBP9.47□□□□□ -0.89
SRSF1-207ENST00000584668 ANO2Q9NQ90 1003 aa9.47□□□□□ -0.89
SRSF1-207ENST00000584668 ZSCAN32Q9NX65 697 aa9.47□□□□□ -0.89
SRSF1-207ENST00000584668 DLGAP2Q9P1A6 1054 aa9.47□□□□□ -0.89
SRSF1-207ENST00000584668 SMG5Q9UPR3 1016 aaKnown RBP9.47□□□□□ -0.89
SRSF1-207ENST00000584668 MRPS17Q9Y2R5 130 aaKnown RBP9.47□□□□□ -0.89
SRSF1-207ENST00000584668 PRG3Q9Y2Y8 225 aaPredicted RBP9.47□□□□□ -0.89
SRSF1-207ENST00000584668 COL4A3BPQ9Y5P4 624 aa9.47□□□□□ -0.89
SRSF1-207ENST00000584668 CACNA1IQ9P0X4 2223 aa9.47□□□□□ -0.89
SRSF1-207ENST00000584668 ZFHX4Q86UP3 3567 aa9.47□□□□□ -0.89
SRSF1-207ENST00000584668 ANHXE9PGG2 379 aa9.46□□□□□ -0.9
SRSF1-207ENST00000584668 ZNF862O60290 1169 aa9.46□□□□□ -0.9
SRSF1-207ENST00000584668 TBC1D4O60343 1298 aa9.46□□□□□ -0.9
SRSF1-207ENST00000584668 FOXD2O60548 495 aaPredicted RBP9.46□□□□□ -0.9
SRSF1-207ENST00000584668 LILRB3O75022 631 aa9.46□□□□□ -0.9
SRSF1-207ENST00000584668 N4BP1O75113 896 aaKnown RBP9.46□□□□□ -0.9
SRSF1-207ENST00000584668 XYLBO75191 536 aa9.46□□□□□ -0.9
SRSF1-207ENST00000584668 MAFO75444 373 aaPredicted RBP9.46□□□□□ -0.9
SRSF1-207ENST00000584668 CSDE1O75534 798 aaKnown RBP9.46□□□□□ -0.9
SRSF1-207ENST00000584668 HNRNPA1P09651 372 aaKnown RBP eCLIP9.46□□□□□ -0.9
SRSF1-207ENST00000584668 NCLP19338 710 aaKnown RBP9.46□□□□□ -0.9
SRSF1-207ENST00000584668 AXLP30530 894 aa9.46□□□□□ -0.9
SRSF1-207ENST00000584668 USP11P51784 963 aa9.46□□□□□ -0.9
SRSF1-207ENST00000584668 NRLP54845 237 aa9.46□□□□□ -0.9
SRSF1-207ENST00000584668 DSG1Q02413 1049 aa9.46□□□□□ -0.9
SRSF1-207ENST00000584668 KRT32Q14532 448 aa9.46□□□□□ -0.9
SRSF1-207ENST00000584668 TARBP2Q15633 366 aaKnown RBP9.46□□□□□ -0.9
SRSF1-207ENST00000584668 USP41Q3LFD5 358 aa9.46□□□□□ -0.9
SRSF1-207ENST00000584668 ZBTB41Q5SVQ8 909 aa9.46□□□□□ -0.9
SRSF1-207ENST00000584668 PDXDC1Q6P996 788 aa9.46□□□□□ -0.9
SRSF1-207ENST00000584668 MRPL10Q7Z7H8 261 aaKnown RBP9.46□□□□□ -0.9
SRSF1-207ENST00000584668 DCLK2Q8N568 766 aa9.46□□□□□ -0.9
SRSF1-207ENST00000584668 SUMF1Q8NBK3 374 aa9.46□□□□□ -0.9
SRSF1-207ENST00000584668 TCP11Q8WWU5 503 aa9.46□□□□□ -0.9
SRSF1-207ENST00000584668 CHAMP1Q96JM3 812 aa9.46□□□□□ -0.9
SRSF1-207ENST00000584668 CCDC136Q96JN2 1154 aa9.46□□□□□ -0.9
SRSF1-207ENST00000584668 NELL2Q99435 816 aa9.46□□□□□ -0.9
SRSF1-207ENST00000584668 IER2Q9BTL4 223 aa9.46□□□□□ -0.9
SRSF1-207ENST00000584668 PRKD2Q9BZL6 878 aa9.46□□□□□ -0.9
SRSF1-207ENST00000584668 FOXQ1Q9C009 403 aa9.46□□□□□ -0.9
SRSF1-207ENST00000584668 NT5C3AQ9H0P0 336 aa9.46□□□□□ -0.9
SRSF1-207ENST00000584668 EPC1Q9H2F5 836 aa9.46□□□□□ -0.9
SRSF1-207ENST00000584668 RXFP1Q9HBX9 757 aa9.46□□□□□ -0.9
SRSF1-207ENST00000584668 FNIP2Q9P278 1114 aa9.46□□□□□ -0.9
SRSF1-207ENST00000584668 IGKV6-21A0A0C4DH24 114 aa9.45□□□□□ -0.9
SRSF1-207ENST00000584668 KLF18A0A0U1RQI7 1052 aa9.45□□□□□ -0.9
SRSF1-207ENST00000584668 DDX11L8A8MPP1 907 aa9.45□□□□□ -0.9
SRSF1-207ENST00000584668 MSH4O15457 936 aa9.45□□□□□ -0.9
SRSF1-207ENST00000584668 TGM5O43548 720 aa9.45□□□□□ -0.9
SRSF1-207ENST00000584668 RFPL2O75678 378 aa9.45□□□□□ -0.9
SRSF1-207ENST00000584668 KRT37O76014 449 aa9.45□□□□□ -0.9
SRSF1-207ENST00000584668 DDHD2O94830 711 aa9.45□□□□□ -0.9
SRSF1-207ENST00000584668 PAPLNO95428 1278 aa9.45□□□□□ -0.9
SRSF1-207ENST00000584668 RFC5P40937 340 aa9.45□□□□□ -0.9
SRSF1-207ENST00000584668 ATXN1P54253 815 aaKnown RBP9.45□□□□□ -0.9
SRSF1-207ENST00000584668 PSMC5P62195 406 aa9.45□□□□□ -0.9
SRSF1-207ENST00000584668 CSTF1Q05048 431 aaKnown RBP9.45□□□□□ -0.9
SRSF1-207ENST00000584668 DMWDQ09019 674 aa9.45□□□□□ -0.9
SRSF1-207ENST00000584668 UGCGQ16739 394 aa9.45□□□□□ -0.9
SRSF1-207ENST00000584668 PPM1LQ5SGD2 360 aa9.45□□□□□ -0.9
SRSF1-207ENST00000584668 NOTUMQ6P988 496 aa9.45□□□□□ -0.9
SRSF1-207ENST00000584668 AGMOQ6ZNB7 445 aa9.45□□□□□ -0.9
SRSF1-207ENST00000584668 DHX32Q7L7V1 743 aaKnown RBP9.45□□□□□ -0.9
SRSF1-207ENST00000584668 PALB2Q86YC2 1186 aa9.45□□□□□ -0.9
SRSF1-207ENST00000584668 DDX1Q92499 740 aaKnown RBP9.45□□□□□ -0.9
SRSF1-207ENST00000584668 SLC5A5Q92911 643 aa9.45□□□□□ -0.9
SRSF1-207ENST00000584668 PHF20Q9BVI0 1012 aa9.45□□□□□ -0.9
SRSF1-207ENST00000584668 UNC45AQ9H3U1 944 aa9.45□□□□□ -0.9
SRSF1-207ENST00000584668 MARCH5Q9NX47 278 aa9.45□□□□□ -0.9
SRSF1-207ENST00000584668 CDH7Q9ULB5 785 aa9.45□□□□□ -0.9
SRSF1-207ENST00000584668 SF3B1O75533 1304 aaKnown RBP eCLIP9.45□□□□□ -0.95e-6■■■□□ 15.3
SRSF1-207ENST00000584668 ZMYM2Q9UBW7 1377 aa9.45□□□□□ -0.9
SRSF1-207ENST00000584668 ARID2Q68CP9 1835 aa9.45□□□□□ -0.9
SRSF1-207ENST00000584668 ARL5CA6NH57 179 aa9.44□□□□□ -0.9
SRSF1-207ENST00000584668 FAM170BA6NMN3 283 aa9.44□□□□□ -0.9
SRSF1-207ENST00000584668 MEIS3P2A8K0S8 358 aa9.44□□□□□ -0.9
SRSF1-207ENST00000584668 ASAP2O43150 1006 aa9.44□□□□□ -0.9
SRSF1-207ENST00000584668 ZMYND10O75800 440 aa9.44□□□□□ -0.9
SRSF1-207ENST00000584668 HOXA9P31269 272 aa9.44□□□□□ -0.9
SRSF1-207ENST00000584668 MLH1P40692 756 aa9.44□□□□□ -0.9
SRSF1-207ENST00000584668 FUT2Q10981 343 aa9.44□□□□□ -0.9
SRSF1-207ENST00000584668 DRP2Q13474 957 aa9.44□□□□□ -0.9
SRSF1-207ENST00000584668 SNW1Q13573 536 aaKnown RBP9.44□□□□□ -0.9
SRSF1-207ENST00000584668 TFDP1Q14186 410 aa9.44□□□□□ -0.9
SRSF1-207ENST00000584668 FUT10Q6P4F1 479 aa9.44□□□□□ -0.9
SRSF1-207ENST00000584668 COLGALT2Q8IYK4 626 aa9.44□□□□□ -0.9
SRSF1-207ENST00000584668 NETO1Q8TDF5 533 aa9.44□□□□□ -0.9
SRSF1-207ENST00000584668 LENG9Q96B70 501 aa9.44□□□□□ -0.9
SRSF1-207ENST00000584668 ZNF707Q96C28 371 aaPredicted RBP9.44□□□□□ -0.9
SRSF1-207ENST00000584668 LSG1Q9H089 658 aaKnown RBP9.44□□□□□ -0.9
SRSF1-207ENST00000584668 GIT1Q9Y2X7 761 aa9.44□□□□□ -0.9
SRSF1-207ENST00000584668 LRP3O75074 770 aa9.43□□□□□ -0.9
SRSF1-207ENST00000584668 ADRB1P08588 477 aa9.43□□□□□ -0.9
SRSF1-207ENST00000584668 SPATA31D3P0C874 917 aa9.43□□□□□ -0.9
SRSF1-207ENST00000584668 SRGAP2CP0DJJ0 459 aa9.43□□□□□ -0.9
SRSF1-207ENST00000584668 RPS9P46781 194 aaKnown RBP9.43□□□□□ -0.9
SRSF1-207ENST00000584668 QARSP47897 775 aaKnown RBP9.43□□□□□ -0.9
SRSF1-207ENST00000584668 GPC5P78333 572 aa9.43□□□□□ -0.9
SRSF1-207ENST00000584668 ELAVL2Q12926 359 aaKnown RBP9.43□□□□□ -0.9
SRSF1-207ENST00000584668 GRIK3Q13003 919 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms