RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 ATP2B1P20020 1258 aa17.43■□□□□ 0.38
SKA2-209ENST00000583976 CDC42EP1Q00587 391 aa17.43■□□□□ 0.38
SKA2-209ENST00000583976 PPP4R3AQ6IN85 833 aa17.43■□□□□ 0.38
SKA2-209ENST00000583976 TMEM105Q8N8V8 129 aa17.43■□□□□ 0.38
SKA2-209ENST00000583976 TMEM87AQ8NBN3 555 aa17.43■□□□□ 0.38
SKA2-209ENST00000583976 RNF149Q8NC42 400 aa17.43■□□□□ 0.38
SKA2-209ENST00000583976 FAM20AQ96MK3 541 aa17.43■□□□□ 0.38
SKA2-209ENST00000583976 JPH2Q9BR39 696 aaPredicted RBP17.43■□□□□ 0.38
SKA2-209ENST00000583976 EIF2AQ9BY44 585 aaKnown RBP17.43■□□□□ 0.38
SKA2-209ENST00000583976 FOXP1Q9H334 677 aaPredicted RBP17.43■□□□□ 0.38
SKA2-209ENST00000583976 SFXN1Q9H9B4 322 aa17.43■□□□□ 0.38
SKA2-209ENST00000583976 HES2Q9Y543 173 aa17.43■□□□□ 0.38
SKA2-209ENST00000583976 C2CD2LO14523 706 aa17.42■□□□□ 0.38
SKA2-209ENST00000583976 TSPAN1O60635 241 aa17.42■□□□□ 0.38
SKA2-209ENST00000583976 CNPP09543 421 aaKnown RBP17.42■□□□□ 0.38
SKA2-209ENST00000583976 MYBP10242 640 aa17.42■□□□□ 0.38
SKA2-209ENST00000583976 GCFC2P16383 781 aaKnown RBP17.42■□□□□ 0.38
SKA2-209ENST00000583976 MLH1P40692 756 aa17.42■□□□□ 0.38
SKA2-209ENST00000583976 RFC5P40937 340 aa17.42■□□□□ 0.38
SKA2-209ENST00000583976 XKR9Q5GH70 373 aa17.42■□□□□ 0.38
SKA2-209ENST00000583976 FERMT3Q86UX7 667 aa17.42■□□□□ 0.38
SKA2-209ENST00000583976 CABP7Q86V35 215 aa17.42■□□□□ 0.38
SKA2-209ENST00000583976 C4orf19Q8IY42 314 aa17.42■□□□□ 0.38
SKA2-209ENST00000583976 SMG8Q8ND04 991 aaKnown RBP17.42■□□□□ 0.38
SKA2-209ENST00000583976 RSPH1Q8WYR4 309 aa17.42■□□□□ 0.38
SKA2-209ENST00000583976 PGBD4Q96DM1 585 aa17.42■□□□□ 0.38
SKA2-209ENST00000583976 CPB2Q96IY4 423 aa17.42■□□□□ 0.38
SKA2-209ENST00000583976 KLHL5Q96PQ7 755 aa17.42■□□□□ 0.38
SKA2-209ENST00000583976 RNF39Q9H2S5 420 aa17.42■□□□□ 0.38
SKA2-209ENST00000583976 LIMD1Q9UGP4 676 aa17.42■□□□□ 0.38
SKA2-209ENST00000583976 TDRD15B5MCY1 1934 aaKnown RBP17.42■□□□□ 0.38
SKA2-209ENST00000583976 VPS37CA5D8V6 355 aaPredicted RBP17.41■□□□□ 0.38
SKA2-209ENST00000583976 H0Y858 1186 aa17.41■□□□□ 0.38
SKA2-209ENST00000583976 CLCN4P51793 760 aa17.41■□□□□ 0.38
SKA2-209ENST00000583976 BMS1Q14692 1282 aaKnown RBP17.41■□□□□ 0.38
SKA2-209ENST00000583976 EPHA7Q15375 998 aa17.41■□□□□ 0.38
SKA2-209ENST00000583976 SRGAP1Q7Z6B7 1085 aa17.41■□□□□ 0.38
SKA2-209ENST00000583976 MRPL10Q7Z7H8 261 aaKnown RBP17.41■□□□□ 0.38
SKA2-209ENST00000583976 NOSTRINQ8IVI9 506 aa17.41■□□□□ 0.38
SKA2-209ENST00000583976 ASAP3Q8TDY4 903 aa17.41■□□□□ 0.38
SKA2-209ENST00000583976 ZFP42Q96MM3 310 aa17.41■□□□□ 0.38
SKA2-209ENST00000583976 MTRQ99707 1265 aa17.41■□□□□ 0.38
SKA2-209ENST00000583976 PRRX2Q99811 253 aa17.41■□□□□ 0.38
SKA2-209ENST00000583976 APOL6Q9BWW8 343 aa17.41■□□□□ 0.38
SKA2-209ENST00000583976 IPPQ9Y573 584 aa17.41■□□□□ 0.38
SKA2-209ENST00000583976 CNTNAP2Q9UHC6 1331 aa17.41■□□□□ 0.38
SKA2-209ENST00000583976 SPDYE4A6NLX3 237 aa17.4■□□□□ 0.38
SKA2-209ENST00000583976 NRP1O14786 923 aa17.4■□□□□ 0.38
SKA2-209ENST00000583976 ERLIN2O94905 339 aa17.4■□□□□ 0.38
SKA2-209ENST00000583976 NCLP19338 710 aaKnown RBP17.4■□□□□ 0.38
SKA2-209ENST00000583976 PDCP20941 246 aa17.4■□□□□ 0.38
SKA2-209ENST00000583976 SYT1P21579 422 aa17.4■□□□□ 0.38
SKA2-209ENST00000583976 SCNN1GP51170 649 aa17.4■□□□□ 0.38
SKA2-209ENST00000583976 CAPSQ13938 189 aa17.4■□□□□ 0.38
SKA2-209ENST00000583976 GIT2Q14161 759 aa17.4■□□□□ 0.38
SKA2-209ENST00000583976 BECN1Q14457 450 aa17.4■□□□□ 0.38
SKA2-209ENST00000583976 CWF19L1Q69YN2 538 aaKnown RBP17.4■□□□□ 0.38
SKA2-209ENST00000583976 TAS1R1Q7RTX1 841 aa17.4■□□□□ 0.38
SKA2-209ENST00000583976 UBALD2Q8IYN6 164 aa17.4■□□□□ 0.38
SKA2-209ENST00000583976 ZDHHC14Q8IZN3 488 aa17.4■□□□□ 0.38
SKA2-209ENST00000583976 GAD1Q99259 594 aa17.4■□□□□ 0.38
SKA2-209ENST00000583976 HERC2P3Q9BVR0 1158 aa17.4■□□□□ 0.38
SKA2-209ENST00000583976 NXF3Q9H4D5 531 aaKnown RBP17.4■□□□□ 0.38
SKA2-209ENST00000583976 ZFHX2Q9C0A1 2572 aaPredicted RBP17.4■□□□□ 0.38
SKA2-209ENST00000583976 TBX3O15119 743 aa17.39■□□□□ 0.37
SKA2-209ENST00000583976 B4GALT5O43286 388 aa17.39■□□□□ 0.37
SKA2-209ENST00000583976 MARCH6O60337 910 aa17.39■□□□□ 0.37
SKA2-209ENST00000583976 GFRA3O60609 400 aa17.39■□□□□ 0.37
SKA2-209ENST00000583976 DKC1O60832 514 aaKnown RBP eCLIP17.39■□□□□ 0.37
SKA2-209ENST00000583976 LILRB3O75022 631 aa17.39■□□□□ 0.37
SKA2-209ENST00000583976 URODP06132 367 aa17.39■□□□□ 0.37
SKA2-209ENST00000583976 U2AF2P26368 475 aaKnown RBP eCLIP17.39■□□□□ 0.37
SKA2-209ENST00000583976 KLRC2P26717 231 aa17.39■□□□□ 0.37
SKA2-209ENST00000583976 ATAT1Q5SQI0 421 aa17.39■□□□□ 0.37
SKA2-209ENST00000583976 CCDC149Q6ZUS6 474 aa17.39■□□□□ 0.37
SKA2-209ENST00000583976 GPR149Q86SP6 731 aa17.39■□□□□ 0.37
SKA2-209ENST00000583976 CDR2LQ86X02 465 aaPredicted RBP17.39■□□□□ 0.37
SKA2-209ENST00000583976 ATOH1Q92858 354 aaPredicted RBP17.39■□□□□ 0.37
SKA2-209ENST00000583976 B3GALT6Q96L58 329 aa17.39■□□□□ 0.37
SKA2-209ENST00000583976 FAM193BQ96PV7 902 aaPredicted RBP17.39■□□□□ 0.37
SKA2-209ENST00000583976 TMEM175Q9BSA9 504 aa17.39■□□□□ 0.37
SKA2-209ENST00000583976 EMILIN2Q9BXX0 1053 aa17.39■□□□□ 0.37
SKA2-209ENST00000583976 MAN1C1Q9NR34 630 aa17.39■□□□□ 0.37
SKA2-209ENST00000583976 CACNG4Q9UBN1 327 aa17.39■□□□□ 0.37
SKA2-209ENST00000583976 FAN1Q9Y2M0 1017 aa17.39■□□□□ 0.37
SKA2-209ENST00000583976 A0A087WWV3 80 aa17.38■□□□□ 0.37
SKA2-209ENST00000583976 ARL5CA6NH57 179 aa17.38■□□□□ 0.37
SKA2-209ENST00000583976 INO80B-WBP1J3KQ70 363 aa17.38■□□□□ 0.37
SKA2-209ENST00000583976 GALR2O43603 387 aaPredicted RBP17.38■□□□□ 0.37
SKA2-209ENST00000583976 SOD2P04179 222 aa17.38■□□□□ 0.37
SKA2-209ENST00000583976 ITGA4P13612 1032 aa17.38■□□□□ 0.37
SKA2-209ENST00000583976 OR1G1P47890 313 aa17.38■□□□□ 0.37
SKA2-209ENST00000583976 PTENP60484 403 aa17.38■□□□□ 0.37
SKA2-209ENST00000583976 MBTD1Q05BQ5 628 aa17.38■□□□□ 0.37
SKA2-209ENST00000583976 AMHR2Q16671 573 aa17.38■□□□□ 0.37
SKA2-209ENST00000583976 PPFIBP1Q86W92 1011 aa17.38■□□□□ 0.37
SKA2-209ENST00000583976 TPH2Q8IWU9 490 aa17.38■□□□□ 0.37
SKA2-209ENST00000583976 COLGALT2Q8IYK4 626 aa17.38■□□□□ 0.37
SKA2-209ENST00000583976 TCP11Q8WWU5 503 aa17.38■□□□□ 0.37
SKA2-209ENST00000583976 EIF2AK1Q9BQI3 630 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms