RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 CYP21A2P08686 494 aa12.5□□□□□ -0.41
CASC3-208ENST00000583649 CD72P21854 359 aa12.5□□□□□ -0.41
CASC3-208ENST00000583649 TARSP26639 723 aaKnown RBP12.5□□□□□ -0.41
CASC3-208ENST00000583649 SFNP31947 248 aa12.5□□□□□ -0.41
CASC3-208ENST00000583649 LIMK1P53667 647 aa12.5□□□□□ -0.41
CASC3-208ENST00000583649 MTAPQ13126 283 aa12.5□□□□□ -0.41
CASC3-208ENST00000583649 HDAC1Q13547 482 aaPredicted RBP12.5□□□□□ -0.41
CASC3-208ENST00000583649 GRASPQ7Z6J2 395 aaPredicted RBP12.5□□□□□ -0.41
CASC3-208ENST00000583649 EXOC8Q8IYI6 725 aa12.5□□□□□ -0.41
CASC3-208ENST00000583649 CMTR1Q8N1G2 835 aaKnown RBP12.5□□□□□ -0.41
CASC3-208ENST00000583649 FGF13Q92913 245 aa12.5□□□□□ -0.41
CASC3-208ENST00000583649 FDXACB1Q9BRP7 624 aaPredicted RBP12.5□□□□□ -0.41
CASC3-208ENST00000583649 OSBPL3Q9H4L5 887 aa12.5□□□□□ -0.41
CASC3-208ENST00000583649 POLIQ9UNA4 740 aa12.5□□□□□ -0.41
CASC3-208ENST00000583649 SPTBN2O15020 2390 aa12.5□□□□□ -0.41
CASC3-208ENST00000583649 ATRXP46100 2492 aa12.49□□□□□ -0.41
CASC3-208ENST00000583649 SMCO2A6NFE2 343 aa12.49□□□□□ -0.41
CASC3-208ENST00000583649 DHX15O43143 795 aaKnown RBP12.49□□□□□ -0.41
CASC3-208ENST00000583649 CSDE1O75534 798 aaKnown RBP12.49□□□□□ -0.41
CASC3-208ENST00000583649 HOXA9P31269 272 aa12.49□□□□□ -0.41
CASC3-208ENST00000583649 MCM5P33992 734 aa12.49□□□□□ -0.41
CASC3-208ENST00000583649 JAK3P52333 1124 aa12.49□□□□□ -0.41
CASC3-208ENST00000583649 PRKCEQ02156 737 aa12.49□□□□□ -0.41
CASC3-208ENST00000583649 N4BP2L1Q5TBK1 243 aaPredicted RBP12.49□□□□□ -0.41
CASC3-208ENST00000583649 RHPN2Q8IUC4 686 aa12.49□□□□□ -0.41
CASC3-208ENST00000583649 FANCBQ8NB91 859 aa12.49□□□□□ -0.41
CASC3-208ENST00000583649 DNASE1L2Q92874 299 aa12.49□□□□□ -0.41
CASC3-208ENST00000583649 PGBD1Q96JS3 809 aa12.49□□□□□ -0.41
CASC3-208ENST00000583649 RPP25Q9BUL9 199 aaKnown RBP12.49□□□□□ -0.41
CASC3-208ENST00000583649 DISC1Q9NRI5 854 aa12.49□□□□□ -0.41
CASC3-208ENST00000583649 AGPAT5Q9NUQ2 364 aa12.49□□□□□ -0.41
CASC3-208ENST00000583649 RBM28Q9NW13 759 aaKnown RBP12.49□□□□□ -0.41
CASC3-208ENST00000583649 SUCLA2Q9P2R7 463 aaPredicted RBP12.49□□□□□ -0.41
CASC3-208ENST00000583649 KCNH3Q9ULD8 1083 aa12.49□□□□□ -0.41
CASC3-208ENST00000583649 CHD6Q8TD26 2715 aa12.49□□□□□ -0.41
CASC3-208ENST00000583649 GPR179Q6PRD1 2367 aa12.48□□□□□ -0.41
CASC3-208ENST00000583649 hCG_1642624A0A1W2PR95 340 aa12.48□□□□□ -0.41
CASC3-208ENST00000583649 FAM86B1E9PN63 330 aa12.48□□□□□ -0.41
CASC3-208ENST00000583649 ECI2O75521 394 aa12.48□□□□□ -0.41
CASC3-208ENST00000583649 CYP3A4P08684 503 aa12.48□□□□□ -0.41
CASC3-208ENST00000583649 FAM86B2P0C5J1 330 aa12.48□□□□□ -0.41
CASC3-208ENST00000583649 ITGA4P13612 1032 aa12.48□□□□□ -0.41
CASC3-208ENST00000583649 CXCL12P48061 93 aa12.48□□□□□ -0.41
CASC3-208ENST00000583649 PDXDC1Q6P996 788 aa12.48□□□□□ -0.41
CASC3-208ENST00000583649 C1orf228Q6PIY5 440 aa12.48□□□□□ -0.41
CASC3-208ENST00000583649 AGMOQ6ZNB7 445 aa12.48□□□□□ -0.41
CASC3-208ENST00000583649 CEP68Q76N32 757 aa12.48□□□□□ -0.41
CASC3-208ENST00000583649 RTL10Q7L3V2 364 aa12.48□□□□□ -0.41
CASC3-208ENST00000583649 MRPL10Q7Z7H8 261 aaKnown RBP12.48□□□□□ -0.41
CASC3-208ENST00000583649 COL26A1Q96A83 441 aa12.48□□□□□ -0.41
CASC3-208ENST00000583649 NLRP4Q96MN2 994 aa12.48□□□□□ -0.41
CASC3-208ENST00000583649 KXD1Q9BQD3 176 aa12.48□□□□□ -0.41
CASC3-208ENST00000583649 CHRDQ9H2X0 955 aa12.48□□□□□ -0.41
CASC3-208ENST00000583649 CHST7Q9NS84 486 aa12.48□□□□□ -0.41
CASC3-208ENST00000583649 GDE1Q9NZC3 331 aa12.48□□□□□ -0.41
CASC3-208ENST00000583649 SEPT9Q9UHD8 586 aaPredicted RBP12.48□□□□□ -0.41
CASC3-208ENST00000583649 NDRG2Q9UN36 371 aaKnown RBP12.48□□□□□ -0.41
CASC3-208ENST00000583649 FAM208BQ5VWN6 2430 aa12.47□□□□□ -0.41
CASC3-208ENST00000583649 PRC1O43663 620 aa12.47□□□□□ -0.41
CASC3-208ENST00000583649 TADA2AO75478 443 aa12.47□□□□□ -0.41
CASC3-208ENST00000583649 LIFRP42702 1097 aa12.47□□□□□ -0.41
CASC3-208ENST00000583649 PCBP1Q15365 356 aaKnown RBP eCLIP12.47□□□□□ -0.41
CASC3-208ENST00000583649 UVSSAQ2YD98 709 aa12.47□□□□□ -0.41
CASC3-208ENST00000583649 PRR16Q569H4 304 aa12.47□□□□□ -0.41
CASC3-208ENST00000583649 XKR3Q5GH77 459 aa12.47□□□□□ -0.41
CASC3-208ENST00000583649 WWC2Q6AWC2 1192 aa12.47□□□□□ -0.41
CASC3-208ENST00000583649 LILRA6Q6PI73 481 aa12.47□□□□□ -0.41
CASC3-208ENST00000583649 UNQ6494/PRO21346Q6UXR6 183 aa12.47□□□□□ -0.41
CASC3-208ENST00000583649 TMTC3Q6ZXV5 915 aa12.47□□□□□ -0.41
CASC3-208ENST00000583649 TAS1R1Q7RTX1 841 aa12.47□□□□□ -0.41
CASC3-208ENST00000583649 GLYCTKQ8IVS8 523 aa12.47□□□□□ -0.41
CASC3-208ENST00000583649 COLGALT2Q8IYK4 626 aa12.47□□□□□ -0.41
CASC3-208ENST00000583649 ST13P5Q8NFI4 369 aaPredicted RBP12.47□□□□□ -0.41
CASC3-208ENST00000583649 CCDC12Q8WUD4 166 aaPredicted RBP12.47□□□□□ -0.41
CASC3-208ENST00000583649 MARCH5Q9NX47 278 aa12.47□□□□□ -0.41
CASC3-208ENST00000583649 ZMIZ1Q9ULJ6 1067 aa12.47□□□□□ -0.41
CASC3-208ENST00000583649 PATJQ8NI35 1801 aa12.46□□□□□ -0.41
CASC3-208ENST00000583649 SF3B1O75533 1304 aaKnown RBP eCLIP12.46□□□□□ -0.415e-6■■■■□ 20.1
CASC3-208ENST00000583649 IGLV3-22A0A075B6J6 115 aa12.46□□□□□ -0.41
CASC3-208ENST00000583649 MEIS3P2A8K0S8 358 aa12.46□□□□□ -0.41
CASC3-208ENST00000583649 ERLIN2O94905 339 aa12.46□□□□□ -0.41
CASC3-208ENST00000583649 C8AP07357 584 aa12.46□□□□□ -0.41
CASC3-208ENST00000583649 POU2F2P09086 479 aa12.46□□□□□ -0.41
CASC3-208ENST00000583649 NCLP19338 710 aaKnown RBP12.46□□□□□ -0.41
CASC3-208ENST00000583649 LRRC32Q14392 662 aa12.46□□□□□ -0.41
CASC3-208ENST00000583649 MTERF2Q49AM1 385 aa12.46□□□□□ -0.41
CASC3-208ENST00000583649 PABPC1LQ4VXU2 614 aaKnown RBP12.46□□□□□ -0.41
CASC3-208ENST00000583649 FUT10Q6P4F1 479 aa12.46□□□□□ -0.41
CASC3-208ENST00000583649 SRGAP1Q7Z6B7 1085 aa12.46□□□□□ -0.41
CASC3-208ENST00000583649 LONP2Q86WA8 852 aa12.46□□□□□ -0.41
CASC3-208ENST00000583649 CHD1LQ86WJ1 897 aa12.46□□□□□ -0.41
CASC3-208ENST00000583649 MB21D2Q8IYB1 491 aaPredicted RBP12.46□□□□□ -0.41
CASC3-208ENST00000583649 RNF168Q8IYW5 571 aaPredicted RBP12.46□□□□□ -0.41
CASC3-208ENST00000583649 RDM1Q8NG50 284 aa12.46□□□□□ -0.41
CASC3-208ENST00000583649 SLC7A3Q8WY07 619 aa12.46□□□□□ -0.41
CASC3-208ENST00000583649 IRF7Q92985 503 aa12.46□□□□□ -0.41
CASC3-208ENST00000583649 MBOAT7Q96N66 472 aa12.46□□□□□ -0.41
CASC3-208ENST00000583649 NIFKQ9BYG3 293 aaKnown RBP12.46□□□□□ -0.41
CASC3-208ENST00000583649 TRIM6Q9C030 488 aaPredicted RBP12.46□□□□□ -0.41
CASC3-208ENST00000583649 BRD9Q9H8M2 597 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms