RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 IFIT1BQ5T764 474 aaKnown RBP7.29□□□□□ -1.24
SMARCE1-219ENST00000583294 KRT40Q6A162 431 aa7.29□□□□□ -1.24
SMARCE1-219ENST00000583294 BORAQ6PGQ7 559 aa7.29□□□□□ -1.24
SMARCE1-219ENST00000583294 SP8Q8IXZ3 490 aa7.29□□□□□ -1.24
SMARCE1-219ENST00000583294 TCEAL8Q8IYN2 117 aa7.29□□□□□ -1.24
SMARCE1-219ENST00000583294 LPPQ93052 612 aa7.29□□□□□ -1.24
SMARCE1-219ENST00000583294 CLIP3Q96DZ5 547 aa7.29□□□□□ -1.24
SMARCE1-219ENST00000583294 NUP88Q99567 741 aaPredicted RBP7.29□□□□□ -1.24
SMARCE1-219ENST00000583294 NCDNQ9UBB6 729 aa7.29□□□□□ -1.24
SMARCE1-219ENST00000583294 HTRA2O43464 458 aaPredicted RBP7.28□□□□□ -1.24
SMARCE1-219ENST00000583294 AP1G1O43747 822 aa7.28□□□□□ -1.24
SMARCE1-219ENST00000583294 PDCP20941 246 aa7.28□□□□□ -1.24
SMARCE1-219ENST00000583294 EDNRBP24530 442 aa7.28□□□□□ -1.24
SMARCE1-219ENST00000583294 ADCY7P51828 1080 aa7.28□□□□□ -1.24
SMARCE1-219ENST00000583294 HGFACQ04756 655 aa7.28□□□□□ -1.24
SMARCE1-219ENST00000583294 NFIXQ14938 502 aa7.28□□□□□ -1.24
SMARCE1-219ENST00000583294 SEPT2Q15019 361 aa7.28□□□□□ -1.24
SMARCE1-219ENST00000583294 C3orf36Q3SXR2 165 aa7.28□□□□□ -1.24
SMARCE1-219ENST00000583294 HSP90AB2PQ58FF8 381 aa7.28□□□□□ -1.24
SMARCE1-219ENST00000583294 LCE5AQ5TCM9 118 aa7.28□□□□□ -1.24
SMARCE1-219ENST00000583294 FAM180AQ6UWF9 173 aa7.28□□□□□ -1.24
SMARCE1-219ENST00000583294 MAGEB6Q8N7X4 407 aa7.28□□□□□ -1.24
SMARCE1-219ENST00000583294 SLC6A15Q9H2J7 730 aa7.28□□□□□ -1.24
SMARCE1-219ENST00000583294 C12orf65Q9H3J6 166 aaKnown RBP7.28□□□□□ -1.24
SMARCE1-219ENST00000583294 ANLNQ9NQW6 1124 aa7.28□□□□□ -1.24
SMARCE1-219ENST00000583294 IPPQ9Y573 584 aa7.28□□□□□ -1.24
SMARCE1-219ENST00000583294 PCDHA13Q9Y5I0 950 aa7.28□□□□□ -1.24
SMARCE1-219ENST00000583294 SLC4A7Q9Y6M7 1214 aa7.28□□□□□ -1.24
SMARCE1-219ENST00000583294 POU2F2P09086 479 aa7.27□□□□□ -1.25
SMARCE1-219ENST00000583294 AKAP5P24588 427 aa7.27□□□□□ -1.25
SMARCE1-219ENST00000583294 FXR1P51114 621 aaKnown RBP eCLIP7.27□□□□□ -1.25
SMARCE1-219ENST00000583294 IL10RAQ13651 578 aa7.27□□□□□ -1.25
SMARCE1-219ENST00000583294 ZNF267Q14586 743 aaPredicted RBP7.27□□□□□ -1.25
SMARCE1-219ENST00000583294 NXNQ6DKJ4 435 aa7.27□□□□□ -1.25
SMARCE1-219ENST00000583294 CXorf57Q6NSI4 855 aaKnown RBP7.27□□□□□ -1.25
SMARCE1-219ENST00000583294 Q6ZVL8 140 aa7.27□□□□□ -1.25
SMARCE1-219ENST00000583294 EPM2AIP1Q7L775 607 aaPredicted RBP7.27□□□□□ -1.25
SMARCE1-219ENST00000583294 LGI4Q8N135 537 aa7.27□□□□□ -1.25
SMARCE1-219ENST00000583294 TTC8Q8TAM2 541 aa7.27□□□□□ -1.25
SMARCE1-219ENST00000583294 KRTAP9-3Q9BYQ3 159 aa7.27□□□□□ -1.25
SMARCE1-219ENST00000583294 GTPBP4Q9BZE4 634 aaKnown RBP7.27□□□□□ -1.25
SMARCE1-219ENST00000583294 PHF2O75151 1096 aa7.26□□□□□ -1.25
SMARCE1-219ENST00000583294 CNOT4O95628 575 aaKnown RBP7.26□□□□□ -1.25
SMARCE1-219ENST00000583294 VSIG10L2P0DP72 767 aa7.26□□□□□ -1.25
SMARCE1-219ENST00000583294 LPOP22079 712 aaPredicted RBP7.26□□□□□ -1.25
SMARCE1-219ENST00000583294 ECHS1P30084 290 aa7.26□□□□□ -1.25
SMARCE1-219ENST00000583294 PER3P56645 1201 aa7.26□□□□□ -1.25
SMARCE1-219ENST00000583294 MGAT2Q10469 447 aa7.26□□□□□ -1.25
SMARCE1-219ENST00000583294 NFYCQ13952 458 aa7.26□□□□□ -1.25
SMARCE1-219ENST00000583294 C19orf54Q5BKX5 351 aa7.26□□□□□ -1.25
SMARCE1-219ENST00000583294 ARHGEF18Q6ZSZ5 1173 aa7.26□□□□□ -1.25
SMARCE1-219ENST00000583294 MIGA2Q7L4E1 593 aa7.26□□□□□ -1.25
SMARCE1-219ENST00000583294 RHOT1Q8IXI2 618 aa7.26□□□□□ -1.25
SMARCE1-219ENST00000583294 GRAMD1CQ8IYS0 662 aa7.26□□□□□ -1.25
SMARCE1-219ENST00000583294 ZNF480Q8WV37 535 aa7.26□□□□□ -1.25
SMARCE1-219ENST00000583294 CFHR4Q92496 578 aa7.26□□□□□ -1.25
SMARCE1-219ENST00000583294 KAT5Q92993 513 aa7.26□□□□□ -1.25
SMARCE1-219ENST00000583294 RAB24Q969Q5 203 aa7.26□□□□□ -1.25
SMARCE1-219ENST00000583294 LRRC37BQ96QE4 947 aa7.26□□□□□ -1.25
SMARCE1-219ENST00000583294 UHRF1Q96T88 793 aaPredicted RBP7.26□□□□□ -1.25
SMARCE1-219ENST00000583294 GPHA2Q96T91 129 aa7.26□□□□□ -1.25
SMARCE1-219ENST00000583294 C7orf25Q9BPX7 421 aa7.26□□□□□ -1.25
SMARCE1-219ENST00000583294 JADE2Q9NQC1 790 aa7.26□□□□□ -1.25
SMARCE1-219ENST00000583294 RTEL1Q9NZ71 1219 aa7.26□□□□□ -1.25
SMARCE1-219ENST00000583294 PUF60Q9UHX1 559 aaKnown RBP7.26□□□□□ -1.25
SMARCE1-219ENST00000583294 DUSP10Q9Y6W6 482 aa7.26□□□□□ -1.25
SMARCE1-219ENST00000583294 FAM171A2A8MVW0 826 aa7.25□□□□□ -1.25
SMARCE1-219ENST00000583294 MATN2O00339 956 aa7.25□□□□□ -1.25
SMARCE1-219ENST00000583294 OFD1O75665 1012 aa7.25□□□□□ -1.25
SMARCE1-219ENST00000583294 JUNP05412 331 aaKnown RBP7.25□□□□□ -1.25
SMARCE1-219ENST00000583294 HSPA6P17066 643 aa7.25□□□□□ -1.25
SMARCE1-219ENST00000583294 WASP42768 502 aa7.25□□□□□ -1.25
SMARCE1-219ENST00000583294 RAC3P60763 192 aa7.25□□□□□ -1.25
SMARCE1-219ENST00000583294 PPP2CBP62714 309 aa7.25□□□□□ -1.25
SMARCE1-219ENST00000583294 PPP2CAP67775 309 aa7.25□□□□□ -1.25
SMARCE1-219ENST00000583294 DUSP2Q05923 314 aa7.25□□□□□ -1.25
SMARCE1-219ENST00000583294 GTF2H3Q13889 308 aa7.25□□□□□ -1.25
SMARCE1-219ENST00000583294 USP45Q70EL2 814 aa7.25□□□□□ -1.25
SMARCE1-219ENST00000583294 NOL8Q76FK4 1167 aaKnown RBP7.25□□□□□ -1.25
SMARCE1-219ENST00000583294 FBXO18Q8NFZ0 1043 aa7.25□□□□□ -1.25
SMARCE1-219ENST00000583294 HDAC10Q969S8 669 aa7.25□□□□□ -1.25
SMARCE1-219ENST00000583294 NEIL1Q96FI4 390 aaPredicted RBP7.25□□□□□ -1.25
SMARCE1-219ENST00000583294 AIFM3Q96NN9 605 aa7.25□□□□□ -1.25
SMARCE1-219ENST00000583294 PTPN18Q99952 460 aa7.25□□□□□ -1.25
SMARCE1-219ENST00000583294 DPYSL5Q9BPU6 564 aa7.25□□□□□ -1.25
SMARCE1-219ENST00000583294 LDAHQ9H6V9 325 aa7.25□□□□□ -1.25
SMARCE1-219ENST00000583294 NMRK2Q9NPI5 230 aa7.25□□□□□ -1.25
SMARCE1-219ENST00000583294 GOLGA6CA6NDK9 693 aa7.24□□□□□ -1.25
SMARCE1-219ENST00000583294 GOLGA6BA6NDN3 693 aa7.24□□□□□ -1.25
SMARCE1-219ENST00000583294 ADCY6O43306 1168 aa7.24□□□□□ -1.25
SMARCE1-219ENST00000583294 GOLGA6DP0CG33 693 aa7.24□□□□□ -1.25
SMARCE1-219ENST00000583294 U2AF1L5P0DN76 240 aaPredicted RBP7.24□□□□□ -1.25
SMARCE1-219ENST00000583294 MYBP10242 640 aa7.24□□□□□ -1.25
SMARCE1-219ENST00000583294 CNR2P34972 360 aa7.24□□□□□ -1.25
SMARCE1-219ENST00000583294 CASRP41180 1078 aa7.24□□□□□ -1.25
SMARCE1-219ENST00000583294 ADAM8P78325 824 aa7.24□□□□□ -1.25
SMARCE1-219ENST00000583294 U2AF1Q01081 240 aaKnown RBP eCLIP7.24□□□□□ -1.25
SMARCE1-219ENST00000583294 SAFB2Q14151 953 aaKnown RBP eCLIP7.24□□□□□ -1.25
SMARCE1-219ENST00000583294 MST1LQ2TV78 715 aa7.24□□□□□ -1.25
SMARCE1-219ENST00000583294 MINDY4Q4G0A6 757 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms