RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 EPS8L3Q8TE67 593 aaKnown RBP11.3□□□□□ -0.6
TOP3A-214ENST00000582981 IQCDQ96DY2 449 aa11.3□□□□□ -0.6
TOP3A-214ENST00000582981 RBM41Q96IZ5 413 aaKnown RBP11.3□□□□□ -0.6
TOP3A-214ENST00000582981 FMO2Q99518 471 aa11.3□□□□□ -0.6
TOP3A-214ENST00000582981 DDX23Q9BUQ8 820 aaKnown RBP11.3□□□□□ -0.6
TOP3A-214ENST00000582981 CNOT10Q9H9A5 744 aaKnown RBP11.3□□□□□ -0.6
TOP3A-214ENST00000582981 LRRC4BQ9NT99 713 aa11.3□□□□□ -0.6
TOP3A-214ENST00000582981 NKX1-2Q9UD57 310 aaPredicted RBP11.3□□□□□ -0.6
TOP3A-214ENST00000582981 TMEM59LQ9UK28 342 aa11.3□□□□□ -0.6
TOP3A-214ENST00000582981 DBR1Q9UK59 544 aaKnown RBP11.3□□□□□ -0.6
TOP3A-214ENST00000582981 AMFRQ9UKV5 643 aa11.3□□□□□ -0.6
TOP3A-214ENST00000582981 ANKRD63C9JTQ0 380 aa11.29□□□□□ -0.6
TOP3A-214ENST00000582981 F8VZ95 297 aa11.29□□□□□ -0.6
TOP3A-214ENST00000582981 MSH4O15457 936 aa11.29□□□□□ -0.6
TOP3A-214ENST00000582981 TGFB1I1O43294 461 aa11.29□□□□□ -0.6
TOP3A-214ENST00000582981 SERPINB2P05120 415 aa11.29□□□□□ -0.6
TOP3A-214ENST00000582981 CREB1P16220 341 aa11.29□□□□□ -0.6
TOP3A-214ENST00000582981 LAMB2P55268 1798 aa11.29□□□□□ -0.6
TOP3A-214ENST00000582981 JAG1P78504 1218 aa11.29□□□□□ -0.6
TOP3A-214ENST00000582981 MTMR3Q13615 1198 aa11.29□□□□□ -0.6
TOP3A-214ENST00000582981 TNIP1Q15025 636 aa11.29□□□□□ -0.6
TOP3A-214ENST00000582981 DYDC2Q96IM9 177 aa11.29□□□□□ -0.6
TOP3A-214ENST00000582981 IFT74Q96LB3 600 aa11.29□□□□□ -0.6
TOP3A-214ENST00000582981 PWWP2AQ96N64 755 aa11.29□□□□□ -0.6
TOP3A-214ENST00000582981 ZNF317Q96PQ6 595 aaPredicted RBP11.29□□□□□ -0.6
TOP3A-214ENST00000582981 LRRC27Q9C0I9 530 aa11.29□□□□□ -0.6
TOP3A-214ENST00000582981 UTP11Q9Y3A2 253 aaKnown RBP11.29□□□□□ -0.6
TOP3A-214ENST00000582981 KDM3AQ9Y4C1 1321 aa11.29□□□□□ -0.6
TOP3A-214ENST00000582981 ABCB11O95342 1321 aa11.29□□□□□ -0.6
TOP3A-214ENST00000582981 AFF2P51816 1311 aa11.29□□□□□ -0.6
TOP3A-214ENST00000582981 ALDH3A1P30838 453 aa11.29□□□□□ -0.6
TOP3A-214ENST00000582981 SSTR3P32745 418 aaPredicted RBP11.29□□□□□ -0.6
TOP3A-214ENST00000582981 STAT1P42224 750 aa11.29□□□□□ -0.6
TOP3A-214ENST00000582981 SPIRE1Q08AE8 756 aa11.29□□□□□ -0.6
TOP3A-214ENST00000582981 ITIH4Q14624 930 aa11.29□□□□□ -0.6
TOP3A-214ENST00000582981 SEPT14Q6ZU15 432 aa11.29□□□□□ -0.6
TOP3A-214ENST00000582981 CTNNBL1Q8WYA6 563 aaPredicted RBP11.29□□□□□ -0.6
TOP3A-214ENST00000582981 NSRP1Q9H0G5 558 aaKnown RBP11.29□□□□□ -0.6
TOP3A-214ENST00000582981 SEMA4AQ9H3S1 761 aa11.29□□□□□ -0.6
TOP3A-214ENST00000582981 KCNMB3Q9NPA1 279 aa11.29□□□□□ -0.6
TOP3A-214ENST00000582981 FGFR1OP2Q9NVK5 253 aa11.29□□□□□ -0.6
TOP3A-214ENST00000582981 CTTNBP2NLQ9P2B4 639 aa11.29□□□□□ -0.6
TOP3A-214ENST00000582981 RNF14Q9UBS8 474 aa11.29□□□□□ -0.6
TOP3A-214ENST00000582981 RABGAP1Q9Y3P9 1069 aa11.29□□□□□ -0.6
TOP3A-214ENST00000582981 CNTNAP4Q9C0A0 1308 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 GOLGA8IPA6NC78 632 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 GOLGA8JA6NMD2 632 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 SNHG28P0DPA3 235 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 COPS2P61201 443 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 CUL1Q13616 776 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 FAM182AQ5T1J6 154 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 ATP8B4Q8TF62 1192 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 EIF2AK1Q9BQI3 630 aaKnown RBP11.28□□□□□ -0.6
TOP3A-214ENST00000582981 CDCA7Q9BWT1 371 aaPredicted RBP11.28□□□□□ -0.6
TOP3A-214ENST00000582981 EDEM3Q9BZQ6 932 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 ETNK1Q9HBU6 452 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 FOXN3O00409 490 aaPredicted RBP11.28□□□□□ -0.6
TOP3A-214ENST00000582981 GNA14O95837 355 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 GBP1P32455 592 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 DR1Q01658 176 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 SLC29A2Q14542 456 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 EPC2Q52LR7 807 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 MTHFD1LQ6UB35 978 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 ZDHHC14Q8IZN3 488 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 SYN2Q92777 582 aaPredicted RBP11.28□□□□□ -0.6
TOP3A-214ENST00000582981 WRAP73Q9P2S5 460 aaPredicted RBP11.28□□□□□ -0.6
TOP3A-214ENST00000582981 RGS16O15492 202 aaPredicted RBP11.28□□□□□ -0.6
TOP3A-214ENST00000582981 ASAP2O43150 1006 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 CLSTN1O94985 981 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 ALADP13716 330 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 MRPS35P82673 323 aaKnown RBP11.28□□□□□ -0.6
TOP3A-214ENST00000582981 KLC1Q07866 573 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 LLGL2Q6P1M3 1020 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 PIGWQ7Z7B1 504 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 VPS36Q86VN1 386 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 TEX9Q8N6V9 391 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 ETNPPLQ8TBG4 499 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 LENG9Q96B70 501 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 RNF25Q96BH1 459 aaPredicted RBP11.28□□□□□ -0.6
TOP3A-214ENST00000582981 FGD4Q96M96 766 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 UBE2OQ9C0C9 1292 aaKnown RBP11.28□□□□□ -0.6
TOP3A-214ENST00000582981 PCMTD2Q9NV79 361 aa11.28□□□□□ -0.6
TOP3A-214ENST00000582981 ATF5Q9Y2D1 282 aaPredicted RBP11.28□□□□□ -0.6
TOP3A-214ENST00000582981 PPFIA2O75334 1257 aa11.27□□□□□ -0.61
TOP3A-214ENST00000582981 ACSL3O95573 720 aa11.27□□□□□ -0.61
TOP3A-214ENST00000582981 TNFAIP3P21580 790 aa11.27□□□□□ -0.61
TOP3A-214ENST00000582981 TPP2P29144 1249 aaPredicted RBP11.27□□□□□ -0.61
TOP3A-214ENST00000582981 GCLMP48507 274 aa11.27□□□□□ -0.61
TOP3A-214ENST00000582981 MUM1Q2TAK8 710 aa11.27□□□□□ -0.61
TOP3A-214ENST00000582981 ANKRD42Q8N9B4 389 aa11.27□□□□□ -0.61
TOP3A-214ENST00000582981 ACTRT1Q8TDG2 376 aa11.27□□□□□ -0.61
TOP3A-214ENST00000582981 PBKQ96KB5 322 aa11.27□□□□□ -0.61
TOP3A-214ENST00000582981 RAB17Q9H0T7 212 aa11.27□□□□□ -0.61
TOP3A-214ENST00000582981 WDR35Q9P2L0 1181 aa11.27□□□□□ -0.61
TOP3A-214ENST00000582981 CTNNAL1Q9UBT7 734 aa11.27□□□□□ -0.61
TOP3A-214ENST00000582981 USP21Q9UK80 565 aa11.27□□□□□ -0.61
TOP3A-214ENST00000582981 CALUO43852 315 aaPredicted RBP11.27□□□□□ -0.61
TOP3A-214ENST00000582981 EXOC3O60645 756 aa11.27□□□□□ -0.61
TOP3A-214ENST00000582981 ZBTB48P10074 688 aaPredicted RBP11.27□□□□□ -0.61
TOP3A-214ENST00000582981 CNGA1P29973 690 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms