RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 C17orf75Q9HAS0 396 aa13.89□□□□□ -0.19
SMARCE1-218ENST00000582955 PLAGL2Q9UPG8 496 aa13.89□□□□□ -0.19
SMARCE1-218ENST00000582955 USP20Q9Y2K6 914 aa13.89□□□□□ -0.19
SMARCE1-218ENST00000582955 HES2Q9Y543 173 aa13.89□□□□□ -0.19
SMARCE1-218ENST00000582955 PHLPP2Q6ZVD8 1323 aa13.89□□□□□ -0.19
SMARCE1-218ENST00000582955 TTLL13PA6NNM8 815 aa13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 SLC16A4O15374 487 aa13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 OFD1O75665 1012 aa13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 FAM13AO94988 1023 aa13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 PLS3P13797 630 aa13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 PBX3P40426 434 aa13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 SMTNP53814 917 aa13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 DNM1Q05193 864 aaKnown RBP13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 CSPP1Q1MSJ5 1256 aa13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 TIGD5Q53EQ6 642 aa13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 ATL3Q6DD88 541 aa13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 KCNT2Q6UVM3 1135 aa13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 CCDC73Q6ZRK6 1079 aa13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 KCNG4Q8TDN1 519 aa13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 ZNF558Q96NG5 402 aa13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 REEP2Q9BRK0 252 aa13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 ADPGKQ9BRR6 497 aa13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 PANK2Q9BZ23 570 aa13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 GBP3Q9H0R5 595 aa13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 NXF3Q9H4D5 531 aaKnown RBP13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 ZHX3Q9H4I2 956 aa13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 PDZD7Q9H5P4 517 aa13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 UBN1Q9NPG3 1134 aa13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 PRDM6Q9NQX0 595 aa13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 TBC1D13Q9NVG8 400 aa13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 LARSQ9P2J5 1176 aaKnown RBP13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 STK17AQ9UEE5 414 aa13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 KCNG1Q9UIX4 513 aa13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 CFAP45Q9UL16 551 aa13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 ODF2LQ9ULJ1 636 aa13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 RBM19Q9Y4C8 960 aaKnown RBP13.88□□□□□ -0.19
SMARCE1-218ENST00000582955 CUTAO60888 179 aa13.87□□□□□ -0.19
SMARCE1-218ENST00000582955 ZC3H11AO75152 810 aaKnown RBP eCLIP13.87□□□□□ -0.19
SMARCE1-218ENST00000582955 TBCAO75347 108 aaKnown RBP13.87□□□□□ -0.19
SMARCE1-218ENST00000582955 FGF18O76093 207 aa13.87□□□□□ -0.19
SMARCE1-218ENST00000582955 BRD1O95696 1058 aa13.87□□□□□ -0.19
SMARCE1-218ENST00000582955 POMCP01189 267 aa13.87□□□□□ -0.19
SMARCE1-218ENST00000582955 EDN1P05305 212 aa13.87□□□□□ -0.19
SMARCE1-218ENST00000582955 DDIT3P35638 169 aa13.87□□□□□ -0.19
SMARCE1-218ENST00000582955 MLH1P40692 756 aa13.87□□□□□ -0.19
SMARCE1-218ENST00000582955 STAT6P42226 847 aa13.87□□□□□ -0.19
SMARCE1-218ENST00000582955 ATF7IP2Q5U623 682 aa13.87□□□□□ -0.19
SMARCE1-218ENST00000582955 PDILTQ8N807 584 aa13.87□□□□□ -0.19
SMARCE1-218ENST00000582955 SPPL3Q8TCT6 385 aa13.87□□□□□ -0.19
SMARCE1-218ENST00000582955 POF1BQ8WVV4 589 aa13.87□□□□□ -0.19
SMARCE1-218ENST00000582955 SPIRE2Q8WWL2 714 aa13.87□□□□□ -0.19
SMARCE1-218ENST00000582955 TMEM134Q9H6X4 195 aa13.87□□□□□ -0.19
SMARCE1-218ENST00000582955 ARHGAP28Q9P2N2 729 aa13.87□□□□□ -0.19
SMARCE1-218ENST00000582955 PARP2Q9UGN5 583 aa13.87□□□□□ -0.19
SMARCE1-218ENST00000582955 PRUNE2Q8WUY3 3088 aa13.86□□□□□ -0.19
SMARCE1-218ENST00000582955 AKAP5P24588 427 aa13.86□□□□□ -0.19
SMARCE1-218ENST00000582955 DNAJB1P25685 340 aa13.86□□□□□ -0.19
SMARCE1-218ENST00000582955 PPM1AP35813 382 aa13.86□□□□□ -0.19
SMARCE1-218ENST00000582955 ME1P48163 572 aa13.86□□□□□ -0.19
SMARCE1-218ENST00000582955 ALDH7A1P49419 539 aaKnown RBP13.86□□□□□ -0.19
SMARCE1-218ENST00000582955 AFF1P51825 1210 aaKnown RBP13.86□□□□□ -0.19
SMARCE1-218ENST00000582955 BCAR1P56945 870 aa13.86□□□□□ -0.19
SMARCE1-218ENST00000582955 STRN3Q13033 797 aa13.86□□□□□ -0.19
SMARCE1-218ENST00000582955 GIT2Q14161 759 aa13.86□□□□□ -0.19
SMARCE1-218ENST00000582955 NT5DC1Q5TFE4 455 aa13.86□□□□□ -0.19
SMARCE1-218ENST00000582955 EEF1DP3Q658K8 133 aa13.86□□□□□ -0.19
SMARCE1-218ENST00000582955 SV2BQ7L1I2 683 aa13.86□□□□□ -0.19
SMARCE1-218ENST00000582955 MYCT1Q8N699 235 aa13.86□□□□□ -0.19
SMARCE1-218ENST00000582955 FAM193BQ96PV7 902 aaPredicted RBP13.86□□□□□ -0.19
SMARCE1-218ENST00000582955 GAD1Q99259 594 aa13.86□□□□□ -0.19
SMARCE1-218ENST00000582955 MRPL4Q9BYD3 311 aaKnown RBP13.86□□□□□ -0.19
SMARCE1-218ENST00000582955 NSUN3Q9H649 340 aaKnown RBP13.86□□□□□ -0.19
SMARCE1-218ENST00000582955 NRDE2Q9H7Z3 1164 aa13.86□□□□□ -0.19
SMARCE1-218ENST00000582955 PARVGQ9HBI0 331 aa13.86□□□□□ -0.19
SMARCE1-218ENST00000582955 SPG21Q9NZD8 308 aa13.86□□□□□ -0.19
SMARCE1-218ENST00000582955 KANSL3Q9P2N6 904 aa13.86□□□□□ -0.19
SMARCE1-218ENST00000582955 THEGQ9P2T0 379 aa13.86□□□□□ -0.19
SMARCE1-218ENST00000582955 GIT1Q9Y2X7 761 aa13.86□□□□□ -0.19
SMARCE1-218ENST00000582955 ZDHHC9Q9Y397 364 aa13.86□□□□□ -0.19
SMARCE1-218ENST00000582955 MYH11P35749 1972 aa13.85□□□□□ -0.19
SMARCE1-218ENST00000582955 A0A087X0B3 334 aa13.85□□□□□ -0.19
SMARCE1-218ENST00000582955 ARL5CA6NH57 179 aa13.85□□□□□ -0.19
SMARCE1-218ENST00000582955 NT5C1B-RDH14C9J2C7 533 aa13.85□□□□□ -0.19
SMARCE1-218ENST00000582955 H0YCG3 227 aa13.85□□□□□ -0.19
SMARCE1-218ENST00000582955 SCNN1GP51170 649 aa13.85□□□□□ -0.19
SMARCE1-218ENST00000582955 KRT17Q04695 432 aa13.85□□□□□ -0.19
SMARCE1-218ENST00000582955 UBE3AQ05086 875 aa13.85□□□□□ -0.19
SMARCE1-218ENST00000582955 DCAF4L1Q3SXM0 396 aa13.85□□□□□ -0.19
SMARCE1-218ENST00000582955 ZNF568Q3ZCX4 644 aa13.85□□□□□ -0.19
SMARCE1-218ENST00000582955 TCEAL5Q5H9L2 206 aa13.85□□□□□ -0.19
SMARCE1-218ENST00000582955 DYMQ7RTS9 669 aa13.85□□□□□ -0.19
SMARCE1-218ENST00000582955 TAS1R3Q7RTX0 852 aa13.85□□□□□ -0.19
SMARCE1-218ENST00000582955 APBB1IPQ7Z5R6 666 aaPredicted RBP13.85□□□□□ -0.19
SMARCE1-218ENST00000582955 SLC39A11Q8N1S5 342 aa13.85□□□□□ -0.19
SMARCE1-218ENST00000582955 TMEM161BQ8NDZ6 487 aa13.85□□□□□ -0.19
SMARCE1-218ENST00000582955 MICAL1Q8TDZ2 1067 aa13.85□□□□□ -0.19
SMARCE1-218ENST00000582955 ZFP42Q96MM3 310 aa13.85□□□□□ -0.19
SMARCE1-218ENST00000582955 RPS6KC1Q96S38 1066 aa13.85□□□□□ -0.19
SMARCE1-218ENST00000582955 NTPCRQ9BSD7 190 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms