RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 MAPK7Q13164 816 aa14.84□□□□□ -0.03
CSNK1D-220ENST00000581737 CAPSQ13938 189 aa14.84□□□□□ -0.03
CSNK1D-220ENST00000581737 ARSHQ5FYA8 562 aa14.84□□□□□ -0.03
CSNK1D-220ENST00000581737 IFNLR1Q8IU57 520 aaPredicted RBP14.84□□□□□ -0.03
CSNK1D-220ENST00000581737 KSR1Q8IVT5 923 aa14.84□□□□□ -0.03
CSNK1D-220ENST00000581737 DEPTORQ8TB45 409 aa14.84□□□□□ -0.03
CSNK1D-220ENST00000581737 PDLIM2Q96JY6 352 aa14.84□□□□□ -0.03
CSNK1D-220ENST00000581737 REEP2Q9BRK0 252 aa14.84□□□□□ -0.03
CSNK1D-220ENST00000581737 FTHL17Q9BXU8 183 aa14.84□□□□□ -0.03
CSNK1D-220ENST00000581737 CBX8Q9HC52 389 aa14.84□□□□□ -0.03
CSNK1D-220ENST00000581737 MICAL3Q7RTP6 2002 aa14.83□□□□□ -0.03
CSNK1D-220ENST00000581737 PLS3P13797 630 aa14.83□□□□□ -0.04
CSNK1D-220ENST00000581737 GAP43P17677 238 aa14.83□□□□□ -0.04
CSNK1D-220ENST00000581737 CD52P31358 61 aa14.83□□□□□ -0.04
CSNK1D-220ENST00000581737 ABCD1P33897 745 aa14.83□□□□□ -0.04
CSNK1D-220ENST00000581737 EFNA5P52803 228 aa14.83□□□□□ -0.04
CSNK1D-220ENST00000581737 SMTNP53814 917 aa14.83□□□□□ -0.04
CSNK1D-220ENST00000581737 PTENP60484 403 aa14.83□□□□□ -0.04
CSNK1D-220ENST00000581737 RAD51AP2Q09MP3 1159 aa14.83□□□□□ -0.04
CSNK1D-220ENST00000581737 IKBKEQ14164 716 aa14.83□□□□□ -0.04
CSNK1D-220ENST00000581737 DAW1Q8N136 415 aa14.83□□□□□ -0.04
CSNK1D-220ENST00000581737 MLKLQ8NB16 471 aa14.83□□□□□ -0.04
CSNK1D-220ENST00000581737 DDX12PQ92771 950 aa14.83□□□□□ -0.04
CSNK1D-220ENST00000581737 UBE2ZQ9H832 354 aaPredicted RBP14.83□□□□□ -0.04
CSNK1D-220ENST00000581737 CDHR5Q9HBB8 845 aa14.83□□□□□ -0.04
CSNK1D-220ENST00000581737 PARVGQ9HBI0 331 aa14.83□□□□□ -0.04
CSNK1D-220ENST00000581737 ERVK-5Q9HDB9 667 aa14.83□□□□□ -0.04
CSNK1D-220ENST00000581737 SEL1LQ9UBV2 794 aa14.83□□□□□ -0.04
CSNK1D-220ENST00000581737 SERTAD1Q9UHV2 236 aa14.83□□□□□ -0.04
CSNK1D-220ENST00000581737 PADI3Q9ULW8 664 aa14.83□□□□□ -0.04
CSNK1D-220ENST00000581737 NOC2LQ9Y3T9 749 aaKnown RBP14.83□□□□□ -0.04
CSNK1D-220ENST00000581737 ABHD14A-ACY1A0A1B0GW23 586 aa14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 LINC01553A4QN01 128 aa14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 MYMKA6NI61 221 aa14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 CCDC169A6NNP5 214 aa14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 ACTN4O43707 911 aaKnown RBP14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 ERLIN2O94905 339 aa14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 KCNA5P22460 613 aa14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 ZNF131P52739 623 aa14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 PEX3P56589 373 aa14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 PLCB2Q00722 1185 aa14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 NCBP1Q09161 790 aaKnown RBP14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 NFX1Q12986 1120 aaKnown RBP14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 GIT2Q14161 759 aa14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 LONRF3Q496Y0 759 aa14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 CDCA2Q69YH5 1023 aaPredicted RBP14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 FAM117BQ6P1L5 589 aa14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 CNNM4Q6P4Q7 775 aa14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 CATSPER4Q7RTX7 472 aa14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 FAM228AQ86W67 206 aa14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 FAM178BQ8IXR5 827 aa14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 CCDC65Q8IXS2 484 aa14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 GJD3Q8N144 294 aa14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 DBF4BQ8NFT6 615 aa14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 TMEM40Q8WWA1 233 aa14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 SPIRE2Q8WWL2 714 aa14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 ZNF668Q96K58 619 aaPredicted RBP14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 GSDMAQ96QA5 445 aa14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 TRIM9Q9C026 710 aa14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 ZHX3Q9H4I2 956 aa14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 AGO3Q9H9G7 860 aaKnown RBP14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 IFT122Q9HBG6 1241 aa14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 KMT5AQ9NQR1 393 aa14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 USP34Q70CQ2 3546 aa14.82□□□□□ -0.04
CSNK1D-220ENST00000581737 C5orf42Q9H799 3197 aa14.81□□□□□ -0.04
CSNK1D-220ENST00000581737 NPHP3-ACAD11A0A0J9YXS1 232 aa14.81□□□□□ -0.04
CSNK1D-220ENST00000581737 INO80B-WBP1J3KQ70 363 aa14.81□□□□□ -0.04
CSNK1D-220ENST00000581737 IKBKBO14920 756 aa14.81□□□□□ -0.04
CSNK1D-220ENST00000581737 GJB5O95377 273 aa14.81□□□□□ -0.04
CSNK1D-220ENST00000581737 NPTX2P47972 431 aa14.81□□□□□ -0.04
CSNK1D-220ENST00000581737 KCNJ6P48051 423 aa14.81□□□□□ -0.04
CSNK1D-220ENST00000581737 ERVK-21P61565 698 aa14.81□□□□□ -0.04
CSNK1D-220ENST00000581737 ASIC1P78348 528 aa14.81□□□□□ -0.04
CSNK1D-220ENST00000581737 LEXMQ3ZCV2 418 aa14.81□□□□□ -0.04
CSNK1D-220ENST00000581737 NT5DC1Q5TFE4 455 aa14.81□□□□□ -0.04
CSNK1D-220ENST00000581737 DYMQ7RTS9 669 aa14.81□□□□□ -0.04
CSNK1D-220ENST00000581737 MYCT1Q8N699 235 aa14.81□□□□□ -0.04
CSNK1D-220ENST00000581737 BSNDQ8WZ55 320 aa14.81□□□□□ -0.04
CSNK1D-220ENST00000581737 PRIMPOLQ96LW4 560 aa14.81□□□□□ -0.04
CSNK1D-220ENST00000581737 C7orf25Q9BPX7 421 aa14.81□□□□□ -0.04
CSNK1D-220ENST00000581737 C17orf80Q9BSJ5 609 aa14.81□□□□□ -0.04
CSNK1D-220ENST00000581737 ZBED2Q9BTP6 218 aa14.81□□□□□ -0.04
CSNK1D-220ENST00000581737 PRMT7Q9NVM4 692 aaPredicted RBP14.81□□□□□ -0.04
CSNK1D-220ENST00000581737 RNF216Q9NWF9 866 aaPredicted RBP14.81□□□□□ -0.04
CSNK1D-220ENST00000581737 LMCD1Q9NZU5 365 aa14.81□□□□□ -0.04
CSNK1D-220ENST00000581737 ST3GAL5Q9UNP4 418 aa14.81□□□□□ -0.04
CSNK1D-220ENST00000581737 PRR33A8MZF0 331 aa14.8□□□□□ -0.04
CSNK1D-220ENST00000581737 ADCY5O95622 1261 aa14.8□□□□□ -0.04
CSNK1D-220ENST00000581737 IDEP14735 1019 aa14.8□□□□□ -0.04
CSNK1D-220ENST00000581737 ZSCAN20P17040 1043 aaPredicted RBP14.8□□□□□ -0.04
CSNK1D-220ENST00000581737 AXLP30530 894 aa14.8□□□□□ -0.04
CSNK1D-220ENST00000581737 PPP1R2P41236 205 aa14.8□□□□□ -0.04
CSNK1D-220ENST00000581737 CACNB1Q02641 598 aaPredicted RBP14.8□□□□□ -0.04
CSNK1D-220ENST00000581737 MBTD1Q05BQ5 628 aa14.8□□□□□ -0.04
CSNK1D-220ENST00000581737 PNOCQ13519 176 aa14.8□□□□□ -0.04
CSNK1D-220ENST00000581737 MAPK6Q16659 721 aa14.8□□□□□ -0.04
CSNK1D-220ENST00000581737 SARM1Q6SZW1 724 aa14.8□□□□□ -0.04
CSNK1D-220ENST00000581737 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.8□□□□□ -0.04
CSNK1D-220ENST00000581737 LUZP1Q86V48 1076 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms