RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 ST6GALNAC4Q9H4F1 302 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 PDZD7Q9H5P4 517 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 KMT5AQ9NQR1 393 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 AAASQ9NRG9 546 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 MTUS1Q9ULD2 1270 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 PCDHA7Q9UN72 937 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 LZTS1Q9Y250 596 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 TNFSF13BQ9Y275 285 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 NPHP3-ACAD11A0A0J9YXS1 232 aa13.91□□□□□ -0.18
SNORD55-201ENST00000581525 FRMD3A2A2Y4 597 aa13.91□□□□□ -0.18
SNORD55-201ENST00000581525 ABLIM1O14639 778 aa13.91□□□□□ -0.18
SNORD55-201ENST00000581525 GRM6O15303 877 aa13.91□□□□□ -0.18
SNORD55-201ENST00000581525 MAPTP10636 758 aaKnown RBP13.91□□□□□ -0.18
SNORD55-201ENST00000581525 IGFBP4P22692 258 aa13.91□□□□□ -0.18
SNORD55-201ENST00000581525 TXLNAP40222 546 aa13.91□□□□□ -0.18
SNORD55-201ENST00000581525 SMTNP53814 917 aa13.91□□□□□ -0.18
SNORD55-201ENST00000581525 FOXD4L5Q5VV16 416 aaPredicted RBP13.91□□□□□ -0.18
SNORD55-201ENST00000581525 CNNM4Q6P4Q7 775 aa13.91□□□□□ -0.18
SNORD55-201ENST00000581525 KCNT2Q6UVM3 1135 aa13.91□□□□□ -0.18
SNORD55-201ENST00000581525 GLB1LQ6UWU2 654 aa13.91□□□□□ -0.18
SNORD55-201ENST00000581525 SV2BQ7L1I2 683 aa13.91□□□□□ -0.18
SNORD55-201ENST00000581525 ABI1Q8IZP0 508 aa13.91□□□□□ -0.18
SNORD55-201ENST00000581525 GSTCDQ8NEC7 633 aa13.91□□□□□ -0.18
SNORD55-201ENST00000581525 FOXD4L4Q8WXT5 416 aaPredicted RBP13.91□□□□□ -0.18
SNORD55-201ENST00000581525 STRA6Q9BX79 667 aa13.91□□□□□ -0.18
SNORD55-201ENST00000581525 CUEDC2Q9H467 287 aa13.91□□□□□ -0.18
SNORD55-201ENST00000581525 RSAD1Q9HA92 442 aa13.91□□□□□ -0.18
SNORD55-201ENST00000581525 TBC1D13Q9NVG8 400 aa13.91□□□□□ -0.18
SNORD55-201ENST00000581525 KBTBD4Q9NVX7 518 aa13.91□□□□□ -0.18
SNORD55-201ENST00000581525 PCDHB12Q9Y5F1 795 aa13.91□□□□□ -0.18
SNORD55-201ENST00000581525 PRRC2BQ5JSZ5 2229 aaKnown RBP13.9□□□□□ -0.18
SNORD55-201ENST00000581525 FAM237AA0A1B0GTK4 181 aa13.9□□□□□ -0.18
SNORD55-201ENST00000581525 CCDC169A6NNP5 214 aa13.9□□□□□ -0.18
SNORD55-201ENST00000581525 H0YCG3 227 aa13.9□□□□□ -0.18
SNORD55-201ENST00000581525 SLC16A4O15374 487 aa13.9□□□□□ -0.18
SNORD55-201ENST00000581525 EFEMP2O95967 443 aa13.9□□□□□ -0.18
SNORD55-201ENST00000581525 PIGRP01833 764 aa13.9□□□□□ -0.18
SNORD55-201ENST00000581525 SSBP05455 408 aaKnown RBP eCLIP13.9□□□□□ -0.18
SNORD55-201ENST00000581525 ITGA4P13612 1032 aa13.9□□□□□ -0.18
SNORD55-201ENST00000581525 ABCD1P33897 745 aa13.9□□□□□ -0.18
SNORD55-201ENST00000581525 AFF1P51825 1210 aaKnown RBP13.9□□□□□ -0.18
SNORD55-201ENST00000581525 GTF2BQ00403 316 aa13.9□□□□□ -0.18
SNORD55-201ENST00000581525 PTPROQ16827 1216 aa13.9□□□□□ -0.18
SNORD55-201ENST00000581525 RESP18Q5W5W9 173 aa13.9□□□□□ -0.18
SNORD55-201ENST00000581525 ADALQ6DHV7 355 aa13.9□□□□□ -0.18
SNORD55-201ENST00000581525 ZPBP2Q6X784 338 aa13.9□□□□□ -0.18
SNORD55-201ENST00000581525 LEO1Q8WVC0 666 aaPredicted RBP13.9□□□□□ -0.18
SNORD55-201ENST00000581525 KIFC3Q9BVG8 833 aa13.9□□□□□ -0.18
SNORD55-201ENST00000581525 NRDE2Q9H7Z3 1164 aa13.9□□□□□ -0.18
SNORD55-201ENST00000581525 PARVGQ9HBI0 331 aa13.9□□□□□ -0.18
SNORD55-201ENST00000581525 HCSTQ9UBK5 93 aa13.9□□□□□ -0.18
SNORD55-201ENST00000581525 ATP6V1DQ9Y5K8 247 aa13.9□□□□□ -0.18
SNORD55-201ENST00000581525 MYH15Q9Y2K3 1946 aa13.9□□□□□ -0.18
SNORD55-201ENST00000581525 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.89□□□□□ -0.19
SNORD55-201ENST00000581525 ARL5CA6NH57 179 aa13.89□□□□□ -0.19
SNORD55-201ENST00000581525 MYMKA6NI61 221 aa13.89□□□□□ -0.19
SNORD55-201ENST00000581525 FGF18O76093 207 aa13.89□□□□□ -0.19
SNORD55-201ENST00000581525 GALTP07902 379 aa13.89□□□□□ -0.19
SNORD55-201ENST00000581525 DNAJB1P25685 340 aa13.89□□□□□ -0.19
SNORD55-201ENST00000581525 PPM1AP35813 382 aa13.89□□□□□ -0.19
SNORD55-201ENST00000581525 NUCB2P80303 420 aa13.89□□□□□ -0.19
SNORD55-201ENST00000581525 DSC1Q08554 894 aa13.89□□□□□ -0.19
SNORD55-201ENST00000581525 RAD51AP2Q09MP3 1159 aa13.89□□□□□ -0.19
SNORD55-201ENST00000581525 DCAF4L1Q3SXM0 396 aa13.89□□□□□ -0.19
SNORD55-201ENST00000581525 XKR4Q5GH76 650 aa13.89□□□□□ -0.19
SNORD55-201ENST00000581525 ATF7IP2Q5U623 682 aa13.89□□□□□ -0.19
SNORD55-201ENST00000581525 EEF1DP3Q658K8 133 aa13.89□□□□□ -0.19
SNORD55-201ENST00000581525 PDE12Q6L8Q7 609 aaKnown RBP13.89□□□□□ -0.19
SNORD55-201ENST00000581525 HAUS6Q7Z4H7 955 aa13.89□□□□□ -0.19
SNORD55-201ENST00000581525 HACE1Q8IYU2 909 aa13.89□□□□□ -0.19
SNORD55-201ENST00000581525 SLC39A11Q8N1S5 342 aa13.89□□□□□ -0.19
SNORD55-201ENST00000581525 RNF169Q8NCN4 708 aa13.89□□□□□ -0.19
SNORD55-201ENST00000581525 SLC17A8Q8NDX2 589 aa13.89□□□□□ -0.19
SNORD55-201ENST00000581525 DDX12PQ92771 950 aa13.89□□□□□ -0.19
SNORD55-201ENST00000581525 ZNF558Q96NG5 402 aa13.89□□□□□ -0.19
SNORD55-201ENST00000581525 TMEM175Q9BSA9 504 aa13.89□□□□□ -0.19
SNORD55-201ENST00000581525 MRPL4Q9BYD3 311 aaKnown RBP13.89□□□□□ -0.19
SNORD55-201ENST00000581525 NXF3Q9H4D5 531 aaKnown RBP13.89□□□□□ -0.19
SNORD55-201ENST00000581525 MIOSQ9NXC5 875 aa13.89□□□□□ -0.19
SNORD55-201ENST00000581525 SEL1LQ9UBV2 794 aa13.89□□□□□ -0.19
SNORD55-201ENST00000581525 NLRC5Q86WI3 1866 aa13.89□□□□□ -0.19
SNORD55-201ENST00000581525 FSCN2O14926 492 aa13.88□□□□□ -0.19
SNORD55-201ENST00000581525 TRAK2O60296 914 aa13.88□□□□□ -0.19
SNORD55-201ENST00000581525 B4GALT3O60512 393 aa13.88□□□□□ -0.19
SNORD55-201ENST00000581525 TOM1L1O75674 476 aa13.88□□□□□ -0.19
SNORD55-201ENST00000581525 PPP1R37O75864 691 aa13.88□□□□□ -0.19
SNORD55-201ENST00000581525 DDHD2O94830 711 aa13.88□□□□□ -0.19
SNORD55-201ENST00000581525 NPTXRO95502 500 aa13.88□□□□□ -0.19
SNORD55-201ENST00000581525 CMA1P23946 247 aa13.88□□□□□ -0.19
SNORD55-201ENST00000581525 BCAR1P56945 870 aa13.88□□□□□ -0.19
SNORD55-201ENST00000581525 KRT85P78386 507 aa13.88□□□□□ -0.19
SNORD55-201ENST00000581525 DHX8Q14562 1220 aaKnown RBP13.88□□□□□ -0.19
SNORD55-201ENST00000581525 NAB2Q15742 525 aa13.88□□□□□ -0.19
SNORD55-201ENST00000581525 ALKAL1Q6UXT8 129 aa13.88□□□□□ -0.19
SNORD55-201ENST00000581525 ZNF720Q7Z2F6 126 aa13.88□□□□□ -0.19
SNORD55-201ENST00000581525 CDR2LQ86X02 465 aaPredicted RBP13.88□□□□□ -0.19
SNORD55-201ENST00000581525 ZNF280BQ86YH2 543 aa13.88□□□□□ -0.19
SNORD55-201ENST00000581525 IQUBQ8NA54 791 aa13.88□□□□□ -0.19
SNORD55-201ENST00000581525 MRPS27Q92552 414 aaKnown RBP13.88□□□□□ -0.19
SNORD55-201ENST00000581525 ADPGKQ9BRR6 497 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms