RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 SFPQP23246 707 aaKnown RBP eCLIP12.06□□□□□ -0.48
TOP3A-210ENST00000580713 NEK4P51957 841 aa12.06□□□□□ -0.48
TOP3A-210ENST00000580713 GPC5P78333 572 aa12.06□□□□□ -0.48
TOP3A-210ENST00000580713 HTR4Q13639 388 aa12.06□□□□□ -0.48
TOP3A-210ENST00000580713 WWC2Q6AWC2 1192 aa12.06□□□□□ -0.48
TOP3A-210ENST00000580713 BLOC1S2Q6QNY1 142 aa12.06□□□□□ -0.48
TOP3A-210ENST00000580713 PALB2Q86YC2 1186 aa12.06□□□□□ -0.48
TOP3A-210ENST00000580713 SMAP1Q8IYB5 467 aaPredicted RBP12.06□□□□□ -0.48
TOP3A-210ENST00000580713 RPS6KC1Q96S38 1066 aa12.06□□□□□ -0.48
TOP3A-210ENST00000580713 RHOBTB2Q9BYZ6 727 aa12.06□□□□□ -0.48
TOP3A-210ENST00000580713 ZSWIM6Q9HCJ5 1215 aa12.06□□□□□ -0.48
TOP3A-210ENST00000580713 TBC1D22BQ9NU19 505 aa12.06□□□□□ -0.48
TOP3A-210ENST00000580713 FAM105AQ9NUU6 356 aa12.06□□□□□ -0.48
TOP3A-210ENST00000580713 RAB23Q9ULC3 237 aa12.06□□□□□ -0.48
TOP3A-210ENST00000580713 CYP46A1Q9Y6A2 500 aa12.06□□□□□ -0.48
TOP3A-210ENST00000580713 CHD6Q8TD26 2715 aa12.06□□□□□ -0.48
TOP3A-210ENST00000580713 MYH9P35579 1960 aaKnown RBP12.05□□□□□ -0.48
TOP3A-210ENST00000580713 A0A087WZ62 844 aa12.05□□□□□ -0.48
TOP3A-210ENST00000580713 SMCO2A6NFE2 343 aa12.05□□□□□ -0.48
TOP3A-210ENST00000580713 ANHXE9PGG2 379 aa12.05□□□□□ -0.48
TOP3A-210ENST00000580713 NRP1O14786 923 aa12.05□□□□□ -0.48
TOP3A-210ENST00000580713 TBC1D4O60343 1298 aa12.05□□□□□ -0.48
TOP3A-210ENST00000580713 B4GALT3O60512 393 aa12.05□□□□□ -0.48
TOP3A-210ENST00000580713 SOD2P04179 222 aa12.05□□□□□ -0.48
TOP3A-210ENST00000580713 OATP04181 439 aa12.05□□□□□ -0.48
TOP3A-210ENST00000580713 HMGB1P09429 215 aaKnown RBP12.05□□□□□ -0.48
TOP3A-210ENST00000580713 RAB27AP51159 221 aa12.05□□□□□ -0.48
TOP3A-210ENST00000580713 AP3B2Q13367 1082 aa12.05□□□□□ -0.48
TOP3A-210ENST00000580713 COL9A3Q14050 684 aaPredicted RBP12.05□□□□□ -0.48
TOP3A-210ENST00000580713 BECN1Q14457 450 aa12.05□□□□□ -0.48
TOP3A-210ENST00000580713 MLF2Q15773 248 aaPredicted RBP12.05□□□□□ -0.48
TOP3A-210ENST00000580713 SLC44A4Q53GD3 710 aa12.05□□□□□ -0.48
TOP3A-210ENST00000580713 JAKMIP3Q5VZ66 844 aa12.05□□□□□ -0.48
TOP3A-210ENST00000580713 TMTC3Q6ZXV5 915 aa12.05□□□□□ -0.48
TOP3A-210ENST00000580713 RUFY3Q7L099 469 aa12.05□□□□□ -0.48
TOP3A-210ENST00000580713 TAS1R1Q7RTX1 841 aa12.05□□□□□ -0.48
TOP3A-210ENST00000580713 CATSPER4Q7RTX7 472 aa12.05□□□□□ -0.48
TOP3A-210ENST00000580713 TMC2Q8TDI7 906 aa12.05□□□□□ -0.48
TOP3A-210ENST00000580713 ZNF707Q96C28 371 aaPredicted RBP12.05□□□□□ -0.48
TOP3A-210ENST00000580713 FDXACB1Q9BRP7 624 aaPredicted RBP12.05□□□□□ -0.48
TOP3A-210ENST00000580713 TMEM175Q9BSA9 504 aa12.05□□□□□ -0.48
TOP3A-210ENST00000580713 RPP25Q9BUL9 199 aaKnown RBP12.05□□□□□ -0.48
TOP3A-210ENST00000580713 HERC2P3Q9BVR0 1158 aa12.05□□□□□ -0.48
TOP3A-210ENST00000580713 TRAIPQ9BWF2 469 aa12.05□□□□□ -0.48
TOP3A-210ENST00000580713 INO80BQ9C086 356 aaPredicted RBP12.05□□□□□ -0.48
TOP3A-210ENST00000580713 NT5C3AQ9H0P0 336 aa12.05□□□□□ -0.48
TOP3A-210ENST00000580713 EPC1Q9H2F5 836 aa12.05□□□□□ -0.48
TOP3A-210ENST00000580713 PRG3Q9Y2Y8 225 aaPredicted RBP12.05□□□□□ -0.48
TOP3A-210ENST00000580713 MTF2Q9Y483 593 aaPredicted RBP12.05□□□□□ -0.48
TOP3A-210ENST00000580713 SLC12A7Q9Y666 1083 aa12.05□□□□□ -0.48
TOP3A-210ENST00000580713 BAHCC1Q9P281 2608 aa12.05□□□□□ -0.48
TOP3A-210ENST00000580713 CFAP47Q6ZTR5 3102 aa12.04□□□□□ -0.48
TOP3A-210ENST00000580713 SH2B2O14492 632 aaPredicted RBP12.04□□□□□ -0.48
TOP3A-210ENST00000580713 GAS2O43903 313 aaKnown RBP12.04□□□□□ -0.48
TOP3A-210ENST00000580713 POMCP01189 267 aa12.04□□□□□ -0.48
TOP3A-210ENST00000580713 CD72P21854 359 aa12.04□□□□□ -0.48
TOP3A-210ENST00000580713 RPS6KB1P23443 525 aa12.04□□□□□ -0.48
TOP3A-210ENST00000580713 FSHRP23945 695 aa12.04□□□□□ -0.48
TOP3A-210ENST00000580713 OR1G1P47890 313 aa12.04□□□□□ -0.48
TOP3A-210ENST00000580713 GLUD2P49448 558 aa12.04□□□□□ -0.48
TOP3A-210ENST00000580713 DNM2P50570 870 aa12.04□□□□□ -0.48
TOP3A-210ENST00000580713 PRKCEQ02156 737 aa12.04□□□□□ -0.48
TOP3A-210ENST00000580713 PRKCQQ04759 706 aa12.04□□□□□ -0.48
TOP3A-210ENST00000580713 DMWDQ09019 674 aa12.04□□□□□ -0.48
TOP3A-210ENST00000580713 SPEM2Q0P670 501 aa12.04□□□□□ -0.48
TOP3A-210ENST00000580713 LPAL2Q16609 132 aa12.04□□□□□ -0.48
TOP3A-210ENST00000580713 TYW1BQ6NUM6 668 aa12.04□□□□□ -0.48
TOP3A-210ENST00000580713 TSSK4Q6SA08 328 aa12.04□□□□□ -0.48
TOP3A-210ENST00000580713 PARM1Q6UWI2 310 aa12.04□□□□□ -0.48
TOP3A-210ENST00000580713 GLYCTKQ8IVS8 523 aa12.04□□□□□ -0.48
TOP3A-210ENST00000580713 HSCBQ8IWL3 235 aa12.04□□□□□ -0.48
TOP3A-210ENST00000580713 FANCBQ8NB91 859 aa12.04□□□□□ -0.48
TOP3A-210ENST00000580713 ZBTB44Q8NCP5 570 aa12.04□□□□□ -0.48
TOP3A-210ENST00000580713 KCNV2Q8TDN2 545 aa12.04□□□□□ -0.48
TOP3A-210ENST00000580713 SNX21Q969T3 373 aa12.04□□□□□ -0.48
TOP3A-210ENST00000580713 PLEKHA4Q9H4M7 779 aa12.04□□□□□ -0.48
TOP3A-210ENST00000580713 RSAD1Q9HA92 442 aa12.04□□□□□ -0.48
TOP3A-210ENST00000580713 PARD6AQ9NPB6 346 aa12.04□□□□□ -0.48
TOP3A-210ENST00000580713 KANSL3Q9P2N6 904 aa12.04□□□□□ -0.48
TOP3A-210ENST00000580713 DOCK8Q8NF50 2099 aa12.04□□□□□ -0.48
TOP3A-210ENST00000580713 IGLV3-22A0A075B6J6 115 aa12.03□□□□□ -0.48
TOP3A-210ENST00000580713 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.03□□□□□ -0.48
TOP3A-210ENST00000580713 WDR64B1ANS9 1081 aa12.03□□□□□ -0.48
TOP3A-210ENST00000580713 ZNF862O60290 1169 aa12.03□□□□□ -0.48
TOP3A-210ENST00000580713 ZNF623O75123 536 aa12.03□□□□□ -0.48
TOP3A-210ENST00000580713 CPA1P15085 419 aa12.03□□□□□ -0.48
TOP3A-210ENST00000580713 TGM1P22735 817 aa12.03□□□□□ -0.48
TOP3A-210ENST00000580713 MCM5P33992 734 aa12.03□□□□□ -0.48
TOP3A-210ENST00000580713 MAGEA9P43362 315 aa12.03□□□□□ -0.48
TOP3A-210ENST00000580713 CDC42EP1Q00587 391 aa12.03□□□□□ -0.48
TOP3A-210ENST00000580713 SETQ01105 290 aaPredicted RBP12.03□□□□□ -0.48
TOP3A-210ENST00000580713 DRP2Q13474 957 aa12.03□□□□□ -0.48
TOP3A-210ENST00000580713 COL9A2Q14055 689 aaPredicted RBP12.03□□□□□ -0.48
TOP3A-210ENST00000580713 ZBTB41Q5SVQ8 909 aa12.03□□□□□ -0.48
TOP3A-210ENST00000580713 PPP1R18Q6NYC8 613 aa12.03□□□□□ -0.48
TOP3A-210ENST00000580713 SYNE3Q6ZMZ3 975 aa12.03□□□□□ -0.48
TOP3A-210ENST00000580713 AGMOQ6ZNB7 445 aa12.03□□□□□ -0.48
TOP3A-210ENST00000580713 MICU3Q86XE3 530 aa12.03□□□□□ -0.48
TOP3A-210ENST00000580713 TEX2Q8IWB9 1127 aa12.03□□□□□ -0.48
TOP3A-210ENST00000580713 NETO1Q8TDF5 533 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms