RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 IL31Q6EBC2 164 aa8.73□□□□□ -1.01
SMARCE1-217ENST00000580654 TYW1BQ6NUM6 668 aa8.73□□□□□ -1.01
SMARCE1-217ENST00000580654 PRR23BQ6ZRT6 265 aa8.73□□□□□ -1.01
SMARCE1-217ENST00000580654 TPRG1Q6ZUI0 275 aa8.73□□□□□ -1.01
SMARCE1-217ENST00000580654 RNF168Q8IYW5 571 aaPredicted RBP8.73□□□□□ -1.01
SMARCE1-217ENST00000580654 METTL13Q8N6R0 699 aa8.73□□□□□ -1.01
SMARCE1-217ENST00000580654 MXRA8Q9BRK3 442 aa8.73□□□□□ -1.01
SMARCE1-217ENST00000580654 HERC2P3Q9BVR0 1158 aa8.73□□□□□ -1.01
SMARCE1-217ENST00000580654 GBP3Q9H0R5 595 aa8.73□□□□□ -1.01
SMARCE1-217ENST00000580654 RXFP1Q9HBX9 757 aa8.73□□□□□ -1.01
SMARCE1-217ENST00000580654 AGO4Q9HCK5 861 aaKnown RBP8.73□□□□□ -1.01
SMARCE1-217ENST00000580654 MARCH5Q9NX47 278 aa8.73□□□□□ -1.01
SMARCE1-217ENST00000580654 RAB23Q9ULC3 237 aa8.73□□□□□ -1.01
SMARCE1-217ENST00000580654 INPP5FQ9Y2H2 1132 aa8.73□□□□□ -1.01
SMARCE1-217ENST00000580654 CARNS1A5YM72 827 aa8.72□□□□□ -1.01
SMARCE1-217ENST00000580654 KCNK5O95279 499 aa8.72□□□□□ -1.01
SMARCE1-217ENST00000580654 SOD2P04179 222 aa8.72□□□□□ -1.01
SMARCE1-217ENST00000580654 ADH1AP07327 375 aa8.72□□□□□ -1.01
SMARCE1-217ENST00000580654 DARSP14868 501 aaKnown RBP8.72□□□□□ -1.01
SMARCE1-217ENST00000580654 FSHRP23945 695 aa8.72□□□□□ -1.01
SMARCE1-217ENST00000580654 GPC3P51654 580 aa8.72□□□□□ -1.01
SMARCE1-217ENST00000580654 AK2P54819 239 aa8.72□□□□□ -1.01
SMARCE1-217ENST00000580654 SIM2Q14190 667 aaPredicted RBP8.72□□□□□ -1.01
SMARCE1-217ENST00000580654 PDXDC2PQ6P474 469 aa8.72□□□□□ -1.01
SMARCE1-217ENST00000580654 LILRA6Q6PI73 481 aa8.72□□□□□ -1.01
SMARCE1-217ENST00000580654 HS6ST3Q8IZP7 471 aa8.72□□□□□ -1.01
SMARCE1-217ENST00000580654 LRRC71Q8N4P6 559 aa8.72□□□□□ -1.01
SMARCE1-217ENST00000580654 HDAC7Q8WUI4 952 aa8.72□□□□□ -1.01
SMARCE1-217ENST00000580654 KXD1Q9BQD3 176 aa8.72□□□□□ -1.01
SMARCE1-217ENST00000580654 SDF4Q9BRK5 362 aa8.72□□□□□ -1.01
SMARCE1-217ENST00000580654 TRAIPQ9BWF2 469 aa8.72□□□□□ -1.01
SMARCE1-217ENST00000580654 KRT23Q9C075 422 aa8.72□□□□□ -1.01
SMARCE1-217ENST00000580654 CHRDQ9H2X0 955 aa8.72□□□□□ -1.01
SMARCE1-217ENST00000580654 PIDD1Q9HB75 910 aa8.72□□□□□ -1.01
SMARCE1-217ENST00000580654 ZNF302Q9NR11 478 aa8.72□□□□□ -1.01
SMARCE1-217ENST00000580654 ZDHHC7Q9NXF8 308 aa8.72□□□□□ -1.01
SMARCE1-217ENST00000580654 CDH7Q9ULB5 785 aa8.72□□□□□ -1.01
SMARCE1-217ENST00000580654 PCDHA6Q9UN73 950 aa8.72□□□□□ -1.01
SMARCE1-217ENST00000580654 PCDHA8Q9Y5H6 950 aa8.72□□□□□ -1.01
SMARCE1-217ENST00000580654 ZFP37Q9Y6Q3 630 aaPredicted RBP8.72□□□□□ -1.01
SMARCE1-217ENST00000580654 IGSF10Q6WRI0 2623 aa8.71□□□□□ -1.01
SMARCE1-217ENST00000580654 AKAP13Q12802 2813 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 TMEM8BA6NDV4 472 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 DDX39AO00148 427 aaKnown RBP8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 NRP1O14786 923 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 BACH1O14867 736 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 DHX15O43143 795 aaKnown RBP8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 TGM5O43548 720 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 TOP3BO95985 862 aaKnown RBP8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 URODP06132 367 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 SPINK2P20155 84 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 NRLP54845 237 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 RNASELQ05823 741 aaKnown RBP8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 ADCY1Q08828 1119 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 SF3A2Q15428 464 aaKnown RBP8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 FAM160B1Q5W0V3 765 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 SWSAP1Q6NVH7 229 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 EFCAB12Q6NXP0 572 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 PPP1R18Q6NYC8 613 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 GLB1LQ6UWU2 654 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 AGMOQ6ZNB7 445 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 TRMT1LQ7Z2T5 733 aaKnown RBP8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 PALB2Q86YC2 1186 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 RSPH1Q8WYR4 309 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 GATA6Q92908 595 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 FGF13Q92913 245 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 PHKBQ93100 1093 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 NELL2Q99435 816 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 SPZ1Q9BXG8 430 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 PLA2G2FQ9BZM2 168 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 PSTPIP2Q9H939 334 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 HEBP1Q9NRV9 189 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 DACT1Q9NYF0 836 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 DPP7Q9UHL4 492 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 AKT3Q9Y243 479 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 ADAMTS20P59510 1910 aa8.71□□□□□ -1.02
SMARCE1-217ENST00000580654 TICRRQ7Z2Z1 1910 aa8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 F8W810 466 aa8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 CCER2I3L3R5 266 aa8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 NCAM2O15394 837 aa8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 GAS2O43903 313 aaKnown RBP8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 ZNF623O75123 536 aa8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 HOXC13P31276 330 aa8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 GLUD2P49448 558 aa8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 PDE1AP54750 535 aa8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 PFKPQ01813 784 aa8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 SATB1Q01826 763 aa8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 DSG1Q02413 1049 aa8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 DRP2Q13474 957 aa8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 GAS6Q14393 721 aa8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 CCDC6Q16204 474 aa8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 AASDHQ4L235 1098 aaPredicted RBP8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 SOWAHCQ53LP3 525 aaPredicted RBP8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 STPG1Q5TH74 334 aa8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 MTSS1LQ765P7 747 aa8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 GRASPQ7Z6J2 395 aaPredicted RBP8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 TICAM2Q86XR7 235 aa8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 FAM160A2Q8N612 972 aaPredicted RBP8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 ITFG1Q8TB96 612 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms