RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 STYXL1Q9Y6J8 313 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 TRIP12Q14669 1992 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 H3BRB1 525 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 TULP1O00294 542 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 LRRN2O75325 713 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 PPFIA4O75335 1185 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 ARHGAP25P42331 645 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 MXI1P50539 228 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 IRX5P78411 483 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 ARID5AQ03989 594 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 CYP24A1Q07973 514 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 KIF18AQ8NI77 898 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 PARD3BQ8TEW8 1205 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 PRIMPOLQ96LW4 560 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 NLRP4Q96MN2 994 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 SPAG5Q96R06 1193 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 TMEM117Q9H0C3 514 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 TUT1Q9H6E5 874 aaKnown RBP16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 FBXL5Q9UKA1 691 aa16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 GNEQ9Y223 722 aaKnown RBP16.13■□□□□ 0.17
CDK5RAP3-218ENST00000580391 RIOK3O14730 519 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP3-218ENST00000580391 N4BP1O75113 896 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP3-218ENST00000580391 PNMA6AP0CW24 399 aaPredicted RBP16.12■□□□□ 0.17
CDK5RAP3-218ENST00000580391 JAM2P57087 298 aa16.12■□□□□ 0.17
CDK5RAP3-218ENST00000580391 NLRP11P59045 1033 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP3-218ENST00000580391 CYP27A1Q02318 531 aa16.12■□□□□ 0.17
CDK5RAP3-218ENST00000580391 ASIC2Q16515 512 aa16.12■□□□□ 0.17
CDK5RAP3-218ENST00000580391 DGKDQ16760 1214 aa16.12■□□□□ 0.17
CDK5RAP3-218ENST00000580391 EPC2Q52LR7 807 aa16.12■□□□□ 0.17
CDK5RAP3-218ENST00000580391 ARHGAP29Q52LW3 1261 aa16.12■□□□□ 0.17
CDK5RAP3-218ENST00000580391 ZBTB8OSQ8IWT0 167 aa16.12■□□□□ 0.17
CDK5RAP3-218ENST00000580391 LMO3Q8TAP4 145 aa16.12■□□□□ 0.17
CDK5RAP3-218ENST00000580391 MFSD14AQ96MC6 490 aa16.12■□□□□ 0.17
CDK5RAP3-218ENST00000580391 WDR24Q96S15 920 aa16.12■□□□□ 0.17
CDK5RAP3-218ENST00000580391 POP1Q99575 1024 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP3-218ENST00000580391 ARHGAP39Q9C0H5 1083 aa16.12■□□□□ 0.17
CDK5RAP3-218ENST00000580391 DEF6Q9H4E7 631 aa16.12■□□□□ 0.17
CDK5RAP3-218ENST00000580391 TRIM10Q9UDY6 481 aa16.12■□□□□ 0.17
CDK5RAP3-218ENST00000580391 CASP8AP2Q9UKL3 1982 aa16.12■□□□□ 0.17
CDK5RAP3-218ENST00000580391 COL1A2P08123 1366 aa16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 DYNC1LI2O43237 492 aaPredicted RBP16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 EXTL3O43909 919 aa16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 MSCO60682 206 aa16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 SERPING1P05155 500 aa16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 PRKCBP05771 671 aa16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 KLRC1P26715 233 aa16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 MCCD1P59942 119 aaPredicted RBP16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 GNG11P61952 73 aa16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 MAPK8IP2Q13387 824 aaPredicted RBP16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 IRF5Q13568 498 aa16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 ENOX2Q16206 610 aaKnown RBP16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 SLC9C1Q4G0N8 1177 aa16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 ZBTB41Q5SVQ8 909 aa16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 TLK2Q86UE8 772 aa16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 LINC01465Q8N7H1 131 aa16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 FAM84AQ96KN4 292 aa16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 AIPL1Q9NZN9 384 aa16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 APEX2Q9UBZ4 518 aa16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 AGO2Q9UKV8 859 aaKnown RBP16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 SSU72P8A0A1W2PR75 194 aa16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 P4HA2O15460 535 aa16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 AOC2O75106 756 aa16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 HARSP12081 509 aaKnown RBP16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 MATR3P43243 847 aaKnown RBP eCLIP16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 ACOT2P49753 483 aa16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 EFNA5P52803 228 aa16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 WNT7BP56706 349 aa16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 MAP2K1Q02750 393 aaPredicted RBP16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 ASTE1Q2TB18 679 aaPredicted RBP16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 TMC2Q8TDI7 906 aa16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 PPP1R16BQ96T49 567 aa16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 MSTO1Q9BUK6 570 aa16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 PAXBP1Q9Y5B6 917 aa16.11■□□□□ 0.17
CDK5RAP3-218ENST00000580391 RCCD1A6NED2 376 aa16.1■□□□□ 0.17
CDK5RAP3-218ENST00000580391 AKR1B10O60218 316 aa16.1■□□□□ 0.17
CDK5RAP3-218ENST00000580391 IPO7O95373 1038 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP3-218ENST00000580391 IGHA2P01877 340 aa16.1■□□□□ 0.17
CDK5RAP3-218ENST00000580391 TUBB4AP04350 444 aa16.1■□□□□ 0.17
CDK5RAP3-218ENST00000580391 DLATP10515 647 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP3-218ENST00000580391 KRT83P78385 493 aa16.1■□□□□ 0.17
CDK5RAP3-218ENST00000580391 PPFIA1Q13136 1202 aa16.1■□□□□ 0.17
CDK5RAP3-218ENST00000580391 CRELD2Q6UXH1 353 aaPredicted RBP16.1■□□□□ 0.17
CDK5RAP3-218ENST00000580391 KIAA1328Q86T90 577 aa16.1■□□□□ 0.17
CDK5RAP3-218ENST00000580391 EHBP1Q8NDI1 1231 aa16.1■□□□□ 0.17
CDK5RAP3-218ENST00000580391 MRPL4Q9BYD3 311 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP3-218ENST00000580391 C2orf40Q9H1Z8 148 aa16.1■□□□□ 0.17
CDK5RAP3-218ENST00000580391 DNAJC12Q9UKB3 198 aa16.1■□□□□ 0.17
CDK5RAP3-218ENST00000580391 MYO6Q9UM54 1294 aa16.1■□□□□ 0.17
CDK5RAP3-218ENST00000580391 MYH10P35580 1976 aa16.1■□□□□ 0.17
CDK5RAP3-218ENST00000580391 A0A0B4J269 797 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 A6NJR5 290 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 ZNF233A6NK53 670 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 GFPT1Q06210 699 aaPredicted RBP16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 KLHL30Q0D2K2 578 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 TFDP1Q14186 410 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 GRIK4Q16099 956 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 MAPK6Q16659 721 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 PHLDB3Q6NSJ2 640 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 ZPBP2Q6X784 338 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 IRF2BP2Q7Z5L9 587 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms