RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 DDTLA6NHG4 134 aaPredicted RBP10.9□□□□□ -0.66
MSI2-209ENST00000579483 ADCY3O60266 1144 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 INHBAP08476 426 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 ADORA2BP29275 332 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 HSD17B4P51659 736 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 PRMT2P55345 433 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 ERVK-9P63128 1117 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 ERVK-24P63145 666 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 EHHADHQ08426 723 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 PCNX4Q63HM2 1172 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 CCDC121Q6ZUS5 278 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 ASIC4Q96FT7 647 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 EPAS1Q99814 870 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 MMTAG2Q9BU76 263 aaKnown RBP10.9□□□□□ -0.66
MSI2-209ENST00000579483 FAM114A2Q9NRY5 505 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 FBXO28Q9NVF7 368 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 MSRAQ9UJ68 235 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 ECEL1O95672 775 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 KCNH2Q12809 1159 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 WDR72Q3MJ13 1102 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 ACCSLQ4AC99 568 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 SPDYE1Q8NFV5 336 aaPredicted RBP10.9□□□□□ -0.66
MSI2-209ENST00000579483 UCMAQ8WVF2 138 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 SP110Q9HB58 689 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 PPP2R2CQ9Y2T4 447 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 SNX9Q9Y5X1 595 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 PITPNM2Q9BZ72 1349 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 TAF6P49848 677 aa10.9□□□□□ -0.67
MSI2-209ENST00000579483 PAPOLAP51003 745 aaKnown RBP10.9□□□□□ -0.67
MSI2-209ENST00000579483 PSMC1P62191 440 aaKnown RBP10.9□□□□□ -0.67
MSI2-209ENST00000579483 DPCR1Q3MIW9 517 aa10.9□□□□□ -0.67
MSI2-209ENST00000579483 SDCCAG8Q86SQ7 713 aaPredicted RBP10.9□□□□□ -0.67
MSI2-209ENST00000579483 ARHGAP24Q8N264 748 aa10.9□□□□□ -0.67
MSI2-209ENST00000579483 MICALL1Q8N3F8 863 aa10.9□□□□□ -0.67
MSI2-209ENST00000579483 MORC4Q8TE76 937 aa10.9□□□□□ -0.67
MSI2-209ENST00000579483 ATP6V1E2Q96A05 226 aa10.9□□□□□ -0.67
MSI2-209ENST00000579483 SAAL1Q96ER3 474 aa10.9□□□□□ -0.67
MSI2-209ENST00000579483 ENTPD7Q9NQZ7 604 aa10.9□□□□□ -0.67
MSI2-209ENST00000579483 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.9□□□□□ -0.67
MSI2-209ENST00000579483 ZMYM2Q9UBW7 1377 aa10.9□□□□□ -0.67
MSI2-209ENST00000579483 MROH7Q68CQ1 1323 aa10.89□□□□□ -0.67
MSI2-209ENST00000579483 PGRMC1O00264 195 aaKnown RBP10.89□□□□□ -0.67
MSI2-209ENST00000579483 VPS41P49754 854 aa10.89□□□□□ -0.67
MSI2-209ENST00000579483 ATN1P54259 1190 aaPredicted RBP10.89□□□□□ -0.67
MSI2-209ENST00000579483 CDO1Q16878 200 aa10.89□□□□□ -0.67
MSI2-209ENST00000579483 DNAJC21Q5F1R6 531 aaKnown RBP10.89□□□□□ -0.67
MSI2-209ENST00000579483 N4BP2L2Q92802 583 aaPredicted RBP10.89□□□□□ -0.67
MSI2-209ENST00000579483 DDX27Q96GQ7 796 aaKnown RBP10.89□□□□□ -0.67
MSI2-209ENST00000579483 CYP26B1Q9NR63 512 aa10.89□□□□□ -0.67
MSI2-209ENST00000579483 CNOT8Q9UFF9 292 aaKnown RBP10.89□□□□□ -0.67
MSI2-209ENST00000579483 TLK1Q9UKI8 766 aa10.89□□□□□ -0.67
MSI2-209ENST00000579483 ZC3H4Q9UPT8 1303 aaKnown RBP10.89□□□□□ -0.67
MSI2-209ENST00000579483 EIF3DO15371 548 aaKnown RBP eCLIP10.89□□□□□ -0.67
MSI2-209ENST00000579483 RGS16O15492 202 aaPredicted RBP10.89□□□□□ -0.67
MSI2-209ENST00000579483 PGBD3Q8N328 593 aa10.89□□□□□ -0.67
MSI2-209ENST00000579483 KLC2Q9H0B6 622 aa10.89□□□□□ -0.67
MSI2-209ENST00000579483 TRPC7Q9HCX4 862 aa10.89□□□□□ -0.67
MSI2-209ENST00000579483 IP6K2Q9UHH9 426 aa10.89□□□□□ -0.67
MSI2-209ENST00000579483 NPM3O75607 178 aaKnown RBP10.89□□□□□ -0.67
MSI2-209ENST00000579483 CYP11B2P19099 503 aa10.89□□□□□ -0.67
MSI2-209ENST00000579483 GPC5P78333 572 aa10.89□□□□□ -0.67
MSI2-209ENST00000579483 KRT71Q3SY84 523 aa10.89□□□□□ -0.67
MSI2-209ENST00000579483 SRRM1Q8IYB3 904 aaKnown RBP10.89□□□□□ -0.67
MSI2-209ENST00000579483 RAB42Q8N4Z0 105 aa10.89□□□□□ -0.67
MSI2-209ENST00000579483 INTS2Q9H0H0 1204 aaKnown RBP10.89□□□□□ -0.67
MSI2-209ENST00000579483 TBC1D12O60347 775 aa10.89□□□□□ -0.67
MSI2-209ENST00000579483 FXR2P51116 673 aaKnown RBP eCLIP10.89□□□□□ -0.67
MSI2-209ENST00000579483 RPL10AP62906 217 aaKnown RBP10.89□□□□□ -0.67
MSI2-209ENST00000579483 PPP6R3Q5H9R7 873 aaPredicted RBP10.89□□□□□ -0.67
MSI2-209ENST00000579483 SPATA24Q86W54 205 aa10.89□□□□□ -0.67
MSI2-209ENST00000579483 TMEM199Q8N511 208 aa10.89□□□□□ -0.67
MSI2-209ENST00000579483 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.89□□□□□ -0.67
MSI2-209ENST00000579483 TROVE2P10155 538 aaKnown RBP eCLIP10.88□□□□□ -0.67
MSI2-209ENST00000579483 SEPT6Q14141 434 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 CCDC62Q6P9F0 684 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 TRIM42Q8IWZ5 723 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 SPON2Q9BUD6 331 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 ZWILCHQ9H900 591 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 DDX56Q9NY93 547 aaKnown RBP10.88□□□□□ -0.67
MSI2-209ENST00000579483 KLHL8Q9P2G9 620 aaPredicted RBP10.88□□□□□ -0.67
MSI2-209ENST00000579483 PGK2P07205 417 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 ADORA2AP29274 412 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 MGAT5BQ3V5L5 792 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 RAPH1Q70E73 1250 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 AKT1S1Q96B36 256 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 CARD6Q9BX69 1037 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 FSD1LQ9BXM9 530 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.88□□□□□ -0.67
MSI2-209ENST00000579483 HSPBP1Q9NZL4 362 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 FAM50BQ9Y247 325 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 IPPQ9Y573 584 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 CNTNAP5Q8WYK1 1306 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 H3BRB1 525 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 AP3B1O00203 1094 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 VWA5AO00534 786 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 U2AF2P26368 475 aaKnown RBP eCLIP10.88□□□□□ -0.67
MSI2-209ENST00000579483 CYP2C19P33261 490 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 SOX5P35711 763 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 PLD1Q13393 1074 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 PPP1R2P1Q96PQ5 205 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms