RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 PRIMPOLQ96LW4 560 aa12.8□□□□□ -0.36
SSH2-208ENST00000579040 EIF2AQ9BY44 585 aaKnown RBP12.8□□□□□ -0.36
SSH2-208ENST00000579040 DZANK1Q9NVP4 752 aa12.8□□□□□ -0.36
SSH2-208ENST00000579040 DAXXQ9UER7 740 aaPredicted RBP12.8□□□□□ -0.36
SSH2-208ENST00000579040 MUTYHQ9UIF7 546 aa12.8□□□□□ -0.36
SSH2-208ENST00000579040 HCFC2Q9Y5Z7 792 aa12.8□□□□□ -0.36
SSH2-208ENST00000579040 STK24Q9Y6E0 443 aa12.8□□□□□ -0.36
SSH2-208ENST00000579040 MYO10Q9HD67 2058 aa12.8□□□□□ -0.36
SSH2-208ENST00000579040 MUC6Q6W4X9 2439 aa12.79□□□□□ -0.36
SSH2-208ENST00000579040 DENND4AQ7Z401 1863 aa12.79□□□□□ -0.36
SSH2-208ENST00000579040 ARL5CA6NH57 179 aa12.79□□□□□ -0.36
SSH2-208ENST00000579040 LRRIQ4A6NIV6 560 aa12.79□□□□□ -0.36
SSH2-208ENST00000579040 B4GALT3O60512 393 aa12.79□□□□□ -0.36
SSH2-208ENST00000579040 DDHD2O94830 711 aa12.79□□□□□ -0.36
SSH2-208ENST00000579040 ALDH2P05091 517 aa12.79□□□□□ -0.36
SSH2-208ENST00000579040 CA8P35219 290 aa12.79□□□□□ -0.36
SSH2-208ENST00000579040 PLA2G5P39877 138 aa12.79□□□□□ -0.36
SSH2-208ENST00000579040 FAM187BQ17R55 369 aa12.79□□□□□ -0.36
SSH2-208ENST00000579040 CDCA2Q69YH5 1023 aaPredicted RBP12.79□□□□□ -0.36
SSH2-208ENST00000579040 CES5AQ6NT32 575 aa12.79□□□□□ -0.36
SSH2-208ENST00000579040 SLC27A1Q6PCB7 646 aa12.79□□□□□ -0.36
SSH2-208ENST00000579040 POTEGQ6S5H5 508 aa12.79□□□□□ -0.36
SSH2-208ENST00000579040 PPP4R3CPQ6ZMV5 832 aa12.79□□□□□ -0.36
SSH2-208ENST00000579040 PPFIBP1Q86W92 1011 aa12.79□□□□□ -0.36
SSH2-208ENST00000579040 ZBTB8OSQ8IWT0 167 aa12.79□□□□□ -0.36
SSH2-208ENST00000579040 CPB2Q96IY4 423 aa12.79□□□□□ -0.36
SSH2-208ENST00000579040 NECTIN4Q96NY8 510 aa12.79□□□□□ -0.36
SSH2-208ENST00000579040 TRIM6Q9C030 488 aaPredicted RBP12.79□□□□□ -0.36
SSH2-208ENST00000579040 PRMT7Q9NVM4 692 aaPredicted RBP12.79□□□□□ -0.36
SSH2-208ENST00000579040 FAN1Q9Y2M0 1017 aa12.79□□□□□ -0.36
SSH2-208ENST00000579040 GIT1Q9Y2X7 761 aa12.79□□□□□ -0.36
SSH2-208ENST00000579040 MTCL1Q9Y4B5 1905 aaKnown RBP12.79□□□□□ -0.36
SSH2-208ENST00000579040 MYH11P35749 1972 aa12.79□□□□□ -0.36
SSH2-208ENST00000579040 TRIP11Q15643 1979 aa12.78□□□□□ -0.36
SSH2-208ENST00000579040 A0A1B0GUA9 196 aa12.78□□□□□ -0.36
SSH2-208ENST00000579040 ARHGEF35A5YM69 484 aa12.78□□□□□ -0.36
SSH2-208ENST00000579040 LAD1O00515 517 aa12.78□□□□□ -0.36
SSH2-208ENST00000579040 NRP1O14786 923 aa12.78□□□□□ -0.36
SSH2-208ENST00000579040 ST18O60284 1047 aa12.78□□□□□ -0.36
SSH2-208ENST00000579040 POMCP01189 267 aa12.78□□□□□ -0.36
SSH2-208ENST00000579040 CYP11B2P19099 503 aa12.78□□□□□ -0.36
SSH2-208ENST00000579040 MLH1P40692 756 aa12.78□□□□□ -0.36
SSH2-208ENST00000579040 AFF1P51825 1210 aaKnown RBP12.78□□□□□ -0.36
SSH2-208ENST00000579040 DSC1Q08554 894 aa12.78□□□□□ -0.36
SSH2-208ENST00000579040 PDIA5Q14554 519 aa12.78□□□□□ -0.36
SSH2-208ENST00000579040 PPP2R5AQ15172 486 aa12.78□□□□□ -0.36
SSH2-208ENST00000579040 PTPN14Q15678 1187 aa12.78□□□□□ -0.36
SSH2-208ENST00000579040 PADI6Q6TGC4 694 aa12.78□□□□□ -0.36
SSH2-208ENST00000579040 COLGALT2Q8IYK4 626 aa12.78□□□□□ -0.36
SSH2-208ENST00000579040 C4orf32Q8N8J7 132 aa12.78□□□□□ -0.36
SSH2-208ENST00000579040 EDAQ92838 391 aa12.78□□□□□ -0.36
SSH2-208ENST00000579040 RPGRIP1Q96KN7 1286 aa12.78□□□□□ -0.36
SSH2-208ENST00000579040 GAD1Q99259 594 aa12.78□□□□□ -0.36
SSH2-208ENST00000579040 VN1R3Q9BXE9 311 aa12.78□□□□□ -0.36
SSH2-208ENST00000579040 RAB34Q9BZG1 259 aa12.78□□□□□ -0.36
SSH2-208ENST00000579040 C2orf40Q9H1Z8 148 aa12.78□□□□□ -0.36
SSH2-208ENST00000579040 ADAM7Q9H2U9 754 aa12.78□□□□□ -0.36
SSH2-208ENST00000579040 GPRC5CQ9NQ84 441 aa12.78□□□□□ -0.36
SSH2-208ENST00000579040 C2orf16Q68DN1 1984 aa12.78□□□□□ -0.36
SSH2-208ENST00000579040 PLXNA3P51805 1871 aa12.77□□□□□ -0.37
SSH2-208ENST00000579040 A0A087WWV3 80 aa12.77□□□□□ -0.37
SSH2-208ENST00000579040 N4BP3O15049 544 aa12.77□□□□□ -0.37
SSH2-208ENST00000579040 B4GALT5O43286 388 aa12.77□□□□□ -0.37
SSH2-208ENST00000579040 NR1I2O75469 434 aa12.77□□□□□ -0.37
SSH2-208ENST00000579040 CCT6AP40227 531 aaKnown RBP12.77□□□□□ -0.37
SSH2-208ENST00000579040 MTHFRP42898 656 aa12.77□□□□□ -0.37
SSH2-208ENST00000579040 NAMPTP43490 491 aa12.77□□□□□ -0.37
SSH2-208ENST00000579040 SLC22A17Q8WUG5 538 aa12.77□□□□□ -0.37
SSH2-208ENST00000579040 AUTS2Q8WXX7 1259 aa12.77□□□□□ -0.37
SSH2-208ENST00000579040 FAM122AQ96E09 287 aa12.77□□□□□ -0.37
SSH2-208ENST00000579040 RIPOR3Q96MK2 946 aa12.77□□□□□ -0.37
SSH2-208ENST00000579040 HERC2P3Q9BVR0 1158 aa12.77□□□□□ -0.37
SSH2-208ENST00000579040 EMILIN2Q9BXX0 1053 aa12.77□□□□□ -0.37
SSH2-208ENST00000579040 RNF39Q9H2S5 420 aa12.77□□□□□ -0.37
SSH2-208ENST00000579040 FZD8Q9H461 694 aa12.77□□□□□ -0.37
SSH2-208ENST00000579040 NXF3Q9H4D5 531 aaKnown RBP12.77□□□□□ -0.37
SSH2-208ENST00000579040 UPF2Q9HAU5 1272 aaKnown RBP12.77□□□□□ -0.37
SSH2-208ENST00000579040 LRWD1Q9UFC0 647 aa12.77□□□□□ -0.37
SSH2-208ENST00000579040 SSX2IPQ9Y2D8 614 aa12.77□□□□□ -0.37
SSH2-208ENST00000579040 NR2E1Q9Y466 385 aa12.77□□□□□ -0.37
SSH2-208ENST00000579040 HES2Q9Y543 173 aa12.77□□□□□ -0.37
SSH2-208ENST00000579040 NPTXRO95502 500 aa12.76□□□□□ -0.37
SSH2-208ENST00000579040 SOD2P04179 222 aa12.76□□□□□ -0.37
SSH2-208ENST00000579040 URODP06132 367 aa12.76□□□□□ -0.37
SSH2-208ENST00000579040 PRPHP41219 470 aa12.76□□□□□ -0.37
SSH2-208ENST00000579040 SCNN1GP51170 649 aa12.76□□□□□ -0.37
SSH2-208ENST00000579040 GRIK3Q13003 919 aa12.76□□□□□ -0.37
SSH2-208ENST00000579040 PTGDRQ13258 359 aa12.76□□□□□ -0.37
SSH2-208ENST00000579040 MAPK6Q16659 721 aa12.76□□□□□ -0.37
SSH2-208ENST00000579040 MAEAQ7L5Y9 396 aa12.76□□□□□ -0.37
SSH2-208ENST00000579040 RNF168Q8IYW5 571 aaPredicted RBP12.76□□□□□ -0.37
SSH2-208ENST00000579040 IGSF22Q8N9C0 903 aa12.76□□□□□ -0.37
SSH2-208ENST00000579040 KIFAP3Q92845 792 aa12.76□□□□□ -0.37
SSH2-208ENST00000579040 ZFP42Q96MM3 310 aa12.76□□□□□ -0.37
SSH2-208ENST00000579040 APOL6Q9BWW8 343 aa12.76□□□□□ -0.37
SSH2-208ENST00000579040 APOL5Q9BWW9 433 aa12.76□□□□□ -0.37
SSH2-208ENST00000579040 KCNH6Q9H252 994 aa12.76□□□□□ -0.37
SSH2-208ENST00000579040 MRPL17Q9NRX2 175 aaKnown RBP12.76□□□□□ -0.37
SSH2-208ENST00000579040 MARCH5Q9NX47 278 aa12.76□□□□□ -0.37
SSH2-208ENST00000579040 PRG3Q9Y2Y8 225 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms