RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 USP20Q9Y2K6 914 aa4.3□□□□□ -1.72
NUP85-209ENST00000578987 NR2E1Q9Y466 385 aa4.3□□□□□ -1.72
NUP85-209ENST00000578987 CYP46A1Q9Y6A2 500 aa4.3□□□□□ -1.72
NUP85-209ENST00000578987 ZNF638Q14966 1978 aaKnown RBP4.3□□□□□ -1.72
NUP85-209ENST00000578987 CACNA1IQ9P0X4 2223 aa4.3□□□□□ -1.72
NUP85-209ENST00000578987 PDCD11Q14690 1871 aaKnown RBP4.3□□□□□ -1.72
NUP85-209ENST00000578987 NID2Q14112 1375 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 CCDC194A0A1B0GVG4 234 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 FSD2A1L4K1 749 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 ARL5CA6NH57 179 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 WNT7AO00755 349 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 GALR2O43603 387 aaPredicted RBP4.29□□□□□ -1.72
NUP85-209ENST00000578987 LILRB3O75022 631 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 ZNF623O75123 536 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 RFPL2O75678 378 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 SLITRK3O94933 977 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 CTDNEP1O95476 244 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 P4HBP07237 508 aaKnown RBP4.29□□□□□ -1.72
NUP85-209ENST00000578987 CFHP08603 1231 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 PYGBP11216 843 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 SKIP12755 728 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 ITGA4P13612 1032 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 NPR3P17342 541 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 RPL17P18621 184 aaKnown RBP4.29□□□□□ -1.72
NUP85-209ENST00000578987 SFPQP23246 707 aaKnown RBP eCLIP4.29□□□□□ -1.72
NUP85-209ENST00000578987 AKAP5P24588 427 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 IGFBP6P24592 240 aaPredicted RBP4.29□□□□□ -1.72
NUP85-209ENST00000578987 GBP2P32456 591 aaPredicted RBP4.29□□□□□ -1.72
NUP85-209ENST00000578987 EVCP57679 992 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 CDC42EP1Q00587 391 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 ITIH3Q06033 890 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 SCRN1Q12765 414 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 PPP2R5CQ13362 524 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 MTMR3Q13615 1198 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 EPHA7Q15375 998 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 PTPN14Q15678 1187 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 ASTLQ6HA08 431 aaPredicted RBP4.29□□□□□ -1.72
NUP85-209ENST00000578987 KIAA1841Q6NSI8 718 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 POTEGQ6S5H5 508 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 SRGAP1Q7Z6B7 1085 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 MRPL10Q7Z7H8 261 aaKnown RBP4.29□□□□□ -1.72
NUP85-209ENST00000578987 ZNF410Q86VK4 478 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 TEX2Q8IWB9 1127 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 COLGALT2Q8IYK4 626 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 ZDHHC14Q8IZN3 488 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 FBXL16Q8N461 479 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 NECAB1Q8N987 351 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 TDRD5Q8NAT2 981 aaKnown RBP4.29□□□□□ -1.72
NUP85-209ENST00000578987 RNF149Q8NC42 400 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 DAGLBQ8NCG7 672 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 RDM1Q8NG50 284 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 URGCPQ8TCY9 931 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 PIGOQ8TEQ8 1089 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 PGBD4Q96DM1 585 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 ZFP42Q96MM3 310 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 MBOAT7Q96N66 472 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 GAD1Q99259 594 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 EIF2AK1Q9BQI3 630 aaKnown RBP4.29□□□□□ -1.72
NUP85-209ENST00000578987 PHF20Q9BVI0 1012 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 MRPL9Q9BYD2 267 aaKnown RBP4.29□□□□□ -1.72
NUP85-209ENST00000578987 CXCL16Q9H2A7 254 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 DHX33Q9H6R0 707 aaKnown RBP4.29□□□□□ -1.72
NUP85-209ENST00000578987 RSAD1Q9HA92 442 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 KCNMB3Q9NPA1 279 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 MRPL17Q9NRX2 175 aaKnown RBP4.29□□□□□ -1.72
NUP85-209ENST00000578987 AGPAT5Q9NUQ2 364 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 VAV3Q9UKW4 847 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 TPCN1Q9ULQ1 816 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 PRG3Q9Y2Y8 225 aaPredicted RBP4.29□□□□□ -1.72
NUP85-209ENST00000578987 IPPQ9Y573 584 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 COL4A3BPQ9Y5P4 624 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 ZDBF2Q9HCK1 2354 aa4.29□□□□□ -1.72
NUP85-209ENST00000578987 USP34Q70CQ2 3546 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 KRBA1A5PL33 1030 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 INO80B-WBP1J3KQ70 363 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 INPPL1O15357 1258 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 TEX28O15482 410 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 ASAP2O43150 1006 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 B4GALT5O43286 388 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 EPB41L2O43491 1005 aaKnown RBP4.28□□□□□ -1.72
NUP85-209ENST00000578987 GAS2O43903 313 aaKnown RBP4.28□□□□□ -1.72
NUP85-209ENST00000578987 ST18O60284 1047 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 ABCB7O75027 752 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 N4BP1O75113 896 aaKnown RBP4.28□□□□□ -1.72
NUP85-209ENST00000578987 PPP1R37O75864 691 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 ERLIN2O94905 339 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 REC8O95072 547 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 BAG4O95429 457 aaKnown RBP4.28□□□□□ -1.72
NUP85-209ENST00000578987 LARGE1O95461 756 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 NPTXRO95502 500 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 FDPSP14324 419 aaKnown RBP4.28□□□□□ -1.72
NUP85-209ENST00000578987 ARF4P18085 180 aaPredicted RBP4.28□□□□□ -1.72
NUP85-209ENST00000578987 LIG1P18858 919 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 NCLP19338 710 aaKnown RBP4.28□□□□□ -1.72
NUP85-209ENST00000578987 ATP2B1P20020 1258 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 YWHABP31946 246 aaKnown RBP4.28□□□□□ -1.72
NUP85-209ENST00000578987 TXKP42681 527 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 SCNN1GP51170 649 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 GUCY1B3Q02153 619 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 NR5A1Q13285 461 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms