RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 TCF15Q12870 199 aa9.95□□□□□ -0.82
GGA3-207ENST00000578896 CAPSQ13938 189 aa9.95□□□□□ -0.82
GGA3-207ENST00000578896 BMS1Q14692 1282 aaKnown RBP9.95□□□□□ -0.82
GGA3-207ENST00000578896 CABP7Q86V35 215 aa9.95□□□□□ -0.82
GGA3-207ENST00000578896 DIS3L2Q8IYB7 885 aaKnown RBP9.95□□□□□ -0.82
GGA3-207ENST00000578896 SLFN12Q8IYM2 578 aa9.95□□□□□ -0.82
GGA3-207ENST00000578896 TCP11Q8WWU5 503 aa9.95□□□□□ -0.82
GGA3-207ENST00000578896 WASF1Q92558 559 aa9.95□□□□□ -0.82
GGA3-207ENST00000578896 B3GALT6Q96L58 329 aa9.95□□□□□ -0.82
GGA3-207ENST00000578896 HSD17B14Q9BPX1 270 aa9.95□□□□□ -0.82
GGA3-207ENST00000578896 TTC12Q9H892 705 aaPredicted RBP9.95□□□□□ -0.82
GGA3-207ENST00000578896 POLD4Q9HCU8 107 aa9.95□□□□□ -0.82
GGA3-207ENST00000578896 GPRC5CQ9NQ84 441 aa9.95□□□□□ -0.82
GGA3-207ENST00000578896 MARCH5Q9NX47 278 aa9.95□□□□□ -0.82
GGA3-207ENST00000578896 KLK14Q9P0G3 267 aa9.95□□□□□ -0.82
GGA3-207ENST00000578896 CACNG4Q9UBN1 327 aa9.95□□□□□ -0.82
GGA3-207ENST00000578896 DBR1Q9UK59 544 aaKnown RBP9.95□□□□□ -0.82
GGA3-207ENST00000578896 PCDHA12Q9UN75 941 aa9.95□□□□□ -0.82
GGA3-207ENST00000578896 USP20Q9Y2K6 914 aa9.95□□□□□ -0.82
GGA3-207ENST00000578896 IPPQ9Y573 584 aa9.95□□□□□ -0.82
GGA3-207ENST00000578896 PLXNA3P51805 1871 aa9.95□□□□□ -0.82
GGA3-207ENST00000578896 TRIP11Q15643 1979 aa9.95□□□□□ -0.82
GGA3-207ENST00000578896 SPTBN4Q9H254 2564 aa9.95□□□□□ -0.82
GGA3-207ENST00000578896 DOCK8Q8NF50 2099 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 ARL5CA6NH57 179 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 POTEMA6NI47 508 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 SPDYE4A6NLX3 237 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 ASAP2O43150 1006 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 USO1O60763 962 aaKnown RBP9.94□□□□□ -0.82
GGA3-207ENST00000578896 LILRB3O75022 631 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 ERLIN2O94905 339 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 NPTXRO95502 500 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 SPATA31D3P0C874 917 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 ARF4P18085 180 aaPredicted RBP9.94□□□□□ -0.82
GGA3-207ENST00000578896 GLRA2P23416 452 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 AVPR2P30518 371 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 ARL2P36404 184 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 MTHFRP42898 656 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 SCNN1GP51170 649 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 NEK4P51957 841 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 MBTD1Q05BQ5 628 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 ITIH3Q06033 890 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 ANKRD1Q15327 319 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 AMHR2Q16671 573 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 ATAT1Q5SQI0 421 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 KIAA1841Q6NSI8 718 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 SPATA31D4Q6ZUB0 917 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 GLYCTKQ8IVS8 523 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 COLGALT2Q8IYK4 626 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 ST13P5Q8NFI4 369 aaPredicted RBP9.94□□□□□ -0.82
GGA3-207ENST00000578896 RIPOR3Q96MK2 946 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 NECTIN4Q96NY8 510 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 NAP1L4Q99733 375 aaKnown RBP9.94□□□□□ -0.82
GGA3-207ENST00000578896 POLR3FQ9H1D9 316 aaPredicted RBP9.94□□□□□ -0.82
GGA3-207ENST00000578896 NXF3Q9H4D5 531 aaKnown RBP9.94□□□□□ -0.82
GGA3-207ENST00000578896 BRMS1Q9HCU9 246 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 NR2E1Q9Y466 385 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 IRAK3Q9Y616 596 aa9.94□□□□□ -0.82
GGA3-207ENST00000578896 VPS13AQ96RL7 3174 aa9.93□□□□□ -0.82
GGA3-207ENST00000578896 CFAP54Q96N23 3096 aa9.93□□□□□ -0.82
GGA3-207ENST00000578896 WDR87Q6ZQQ6 2873 aa9.93□□□□□ -0.82
GGA3-207ENST00000578896 CNTNAP2Q9UHC6 1331 aa9.93□□□□□ -0.82
GGA3-207ENST00000578896 TTLL13PA6NNM8 815 aa9.93□□□□□ -0.82
GGA3-207ENST00000578896 H0Y858 1186 aa9.93□□□□□ -0.82
GGA3-207ENST00000578896 NEMFO60524 1076 aa9.93□□□□□ -0.82
GGA3-207ENST00000578896 MED24O75448 989 aa9.93□□□□□ -0.82
GGA3-207ENST00000578896 SPATA31C1P0DKV0 1188 aa9.93□□□□□ -0.82
GGA3-207ENST00000578896 LIG1P18858 919 aa9.93□□□□□ -0.82
GGA3-207ENST00000578896 MCM7P33993 719 aa9.93□□□□□ -0.82
GGA3-207ENST00000578896 RARRES1P49788 294 aa9.93□□□□□ -0.82
GGA3-207ENST00000578896 CLCN4P51793 760 aa9.93□□□□□ -0.82
GGA3-207ENST00000578896 ANAPC15P60006 121 aa9.93□□□□□ -0.82
GGA3-207ENST00000578896 ZNF174Q15697 407 aa9.93□□□□□ -0.82
GGA3-207ENST00000578896 EXOC8Q8IYI6 725 aa9.93□□□□□ -0.82
GGA3-207ENST00000578896 TDRD5Q8NAT2 981 aaKnown RBP9.93□□□□□ -0.82
GGA3-207ENST00000578896 CCDC43Q96MW1 224 aaKnown RBP9.93□□□□□ -0.82
GGA3-207ENST00000578896 MTMR9Q96QG7 549 aa9.93□□□□□ -0.82
GGA3-207ENST00000578896 TMEM175Q9BSA9 504 aa9.93□□□□□ -0.82
GGA3-207ENST00000578896 EMILIN2Q9BXX0 1053 aa9.93□□□□□ -0.82
GGA3-207ENST00000578896 CSRNP2Q9H175 543 aa9.93□□□□□ -0.82
GGA3-207ENST00000578896 KCNH6Q9H252 994 aa9.93□□□□□ -0.82
GGA3-207ENST00000578896 CXCL16Q9H2A7 254 aa9.93□□□□□ -0.82
GGA3-207ENST00000578896 MRPL17Q9NRX2 175 aaKnown RBP9.93□□□□□ -0.82
GGA3-207ENST00000578896 DZANK1Q9NVP4 752 aa9.93□□□□□ -0.82
GGA3-207ENST00000578896 PPP4R2Q9NY27 417 aa9.93□□□□□ -0.82
GGA3-207ENST00000578896 KANSL3Q9P2N6 904 aa9.93□□□□□ -0.82
GGA3-207ENST00000578896 PARP2Q9UGN5 583 aa9.93□□□□□ -0.82
GGA3-207ENST00000578896 PPME1Q9Y570 386 aa9.93□□□□□ -0.82
GGA3-207ENST00000578896 MTCL1Q9Y4B5 1905 aaKnown RBP9.93□□□□□ -0.82
GGA3-207ENST00000578896 EP300Q09472 2414 aaPredicted RBP9.93□□□□□ -0.82
GGA3-207ENST00000578896 DENND4AQ7Z401 1863 aa9.92□□□□□ -0.82
GGA3-207ENST00000578896 LRRIQ4A6NIV6 560 aa9.92□□□□□ -0.82
GGA3-207ENST00000578896 TEX28O15482 410 aa9.92□□□□□ -0.82
GGA3-207ENST00000578896 GAS2O43903 313 aaKnown RBP9.92□□□□□ -0.82
GGA3-207ENST00000578896 RFPL2O75678 378 aa9.92□□□□□ -0.82
GGA3-207ENST00000578896 DGAT1O75907 488 aa9.92□□□□□ -0.82
GGA3-207ENST00000578896 LYPLA2O95372 231 aa9.92□□□□□ -0.82
GGA3-207ENST00000578896 SOD2P04179 222 aa9.92□□□□□ -0.82
GGA3-207ENST00000578896 RPL17P18621 184 aaKnown RBP9.92□□□□□ -0.82
GGA3-207ENST00000578896 PTPN5P54829 565 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms