RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 TOM1L1O75674 476 aa14.67□□□□□ -0.06
SRSF1-202ENST00000578430 GJB1P08034 283 aa14.67□□□□□ -0.06
SRSF1-202ENST00000578430 COPB1P53618 953 aaKnown RBP14.67□□□□□ -0.06
SRSF1-202ENST00000578430 CRYBB1P53674 252 aaPredicted RBP14.67□□□□□ -0.06
SRSF1-202ENST00000578430 ZNF200P98182 395 aaPredicted RBP14.67□□□□□ -0.06
SRSF1-202ENST00000578430 ENPEPQ07075 957 aa14.67□□□□□ -0.06
SRSF1-202ENST00000578430 CCDC173Q0VFZ6 552 aa14.67□□□□□ -0.06
SRSF1-202ENST00000578430 PTK7Q13308 1070 aa14.67□□□□□ -0.06
SRSF1-202ENST00000578430 MAN2A1Q16706 1144 aa14.67□□□□□ -0.06
SRSF1-202ENST00000578430 HSP90AA4PQ58FG1 418 aa14.67□□□□□ -0.06
SRSF1-202ENST00000578430 APTXQ7Z2E3 356 aaKnown RBP14.67□□□□□ -0.06
SRSF1-202ENST00000578430 TUBGCP2Q9BSJ2 902 aa14.67□□□□□ -0.06
SRSF1-202ENST00000578430 HSPBP1Q9NZL4 362 aa14.67□□□□□ -0.06
SRSF1-202ENST00000578430 ARMCX3Q9UH62 379 aaPredicted RBP14.67□□□□□ -0.06
SRSF1-202ENST00000578430 ANKRD63C9JTQ0 380 aa14.66□□□□□ -0.06
SRSF1-202ENST00000578430 ARVCFO00192 962 aa14.66□□□□□ -0.06
SRSF1-202ENST00000578430 LDHAP00338 332 aaKnown RBP14.66□□□□□ -0.06
SRSF1-202ENST00000578430 CYP2J2P51589 502 aa14.66□□□□□ -0.06
SRSF1-202ENST00000578430 NCBP1Q09161 790 aaKnown RBP14.66□□□□□ -0.06
SRSF1-202ENST00000578430 PRPF4BQ13523 1007 aaKnown RBP14.66□□□□□ -0.06
SRSF1-202ENST00000578430 NR1I3Q14994 352 aa14.66□□□□□ -0.06
SRSF1-202ENST00000578430 PTGISQ16647 500 aa14.66□□□□□ -0.06
SRSF1-202ENST00000578430 CEP135Q66GS9 1140 aa14.66□□□□□ -0.06
SRSF1-202ENST00000578430 SLC39A4Q6P5W5 647 aa14.66□□□□□ -0.06
SRSF1-202ENST00000578430 TSHZ1Q6ZSZ6 1077 aa14.66□□□□□ -0.06
SRSF1-202ENST00000578430 TRIM59Q8IWR1 403 aa14.66□□□□□ -0.06
SRSF1-202ENST00000578430 FAM186BQ8IYM0 893 aa14.66□□□□□ -0.06
SRSF1-202ENST00000578430 ANKLE1Q8NAG6 615 aa14.66□□□□□ -0.06
SRSF1-202ENST00000578430 POMGNT1Q8WZA1 660 aa14.66□□□□□ -0.06
SRSF1-202ENST00000578430 PDLIM2Q96JY6 352 aa14.66□□□□□ -0.06
SRSF1-202ENST00000578430 ACO2Q99798 780 aaKnown RBP14.66□□□□□ -0.06
SRSF1-202ENST00000578430 TARS2Q9BW92 718 aaKnown RBP14.66□□□□□ -0.06
SRSF1-202ENST00000578430 XPO4Q9C0E2 1151 aaKnown RBP14.66□□□□□ -0.06
SRSF1-202ENST00000578430 RTN4Q9NQC3 1192 aaKnown RBP14.66□□□□□ -0.06
SRSF1-202ENST00000578430 NOD1Q9Y239 953 aa14.66□□□□□ -0.06
SRSF1-202ENST00000578430 KIAA0100Q14667 2235 aaKnown RBP14.66□□□□□ -0.06
SRSF1-202ENST00000578430 CNTNAP2Q9UHC6 1331 aa14.66□□□□□ -0.06
SRSF1-202ENST00000578430 A0A0B4J269 797 aa14.65□□□□□ -0.06
SRSF1-202ENST00000578430 LGALS16A8MUM7 142 aa14.65□□□□□ -0.06
SRSF1-202ENST00000578430 N4BP3O15049 544 aa14.65□□□□□ -0.06
SRSF1-202ENST00000578430 CLDN3O15551 220 aa14.65□□□□□ -0.06
SRSF1-202ENST00000578430 AKAP3O75969 853 aa14.65□□□□□ -0.06
SRSF1-202ENST00000578430 SGPL1O95470 568 aa14.65□□□□□ -0.06
SRSF1-202ENST00000578430 DARSP14868 501 aaKnown RBP14.65□□□□□ -0.06
SRSF1-202ENST00000578430 EIF4BP23588 611 aaKnown RBP14.65□□□□□ -0.06
SRSF1-202ENST00000578430 ADSSP30520 456 aa14.65□□□□□ -0.06
SRSF1-202ENST00000578430 AXLP30530 894 aa14.65□□□□□ -0.06
SRSF1-202ENST00000578430 MCCD1P59942 119 aaPredicted RBP14.65□□□□□ -0.06
SRSF1-202ENST00000578430 MRPS6P82932 125 aaKnown RBP14.65□□□□□ -0.06
SRSF1-202ENST00000578430 KYAT1Q16773 422 aa14.65□□□□□ -0.06
SRSF1-202ENST00000578430 KIZQ2M2Z5 673 aa14.65□□□□□ -0.06
SRSF1-202ENST00000578430 INTS8Q75QN2 995 aaKnown RBP14.65□□□□□ -0.06
SRSF1-202ENST00000578430 APBB1IPQ7Z5R6 666 aaPredicted RBP14.65□□□□□ -0.06
SRSF1-202ENST00000578430 USP37Q86T82 979 aa14.65□□□□□ -0.06
SRSF1-202ENST00000578430 CREBRFQ8IUR6 639 aa14.65□□□□□ -0.06
SRSF1-202ENST00000578430 EEF2KMTQ96G04 330 aa14.65□□□□□ -0.06
SRSF1-202ENST00000578430 FBXL18Q96ME1 805 aa14.65□□□□□ -0.06
SRSF1-202ENST00000578430 PPP1R9BQ96SB3 815 aa14.65□□□□□ -0.06
SRSF1-202ENST00000578430 CBWD1Q9BRT8 395 aa14.65□□□□□ -0.06
SRSF1-202ENST00000578430 NOC4LQ9BVI4 516 aaKnown RBP14.65□□□□□ -0.06
SRSF1-202ENST00000578430 CELF4Q9BZC1 486 aaKnown RBP14.65□□□□□ -0.06
SRSF1-202ENST00000578430 IKZF4Q9H2S9 585 aa14.65□□□□□ -0.06
SRSF1-202ENST00000578430 MINDY3Q9H8M7 445 aa14.65□□□□□ -0.06
SRSF1-202ENST00000578430 TAB2Q9NYJ8 693 aa14.65□□□□□ -0.06
SRSF1-202ENST00000578430 TNFSF13BQ9Y275 285 aa14.65□□□□□ -0.06
SRSF1-202ENST00000578430 TRPV2Q9Y5S1 764 aa14.65□□□□□ -0.06
SRSF1-202ENST00000578430 TRIP12Q14669 1992 aaPredicted RBP14.65□□□□□ -0.06
SRSF1-202ENST00000578430 EXTL3O43909 919 aa14.64□□□□□ -0.07
SRSF1-202ENST00000578430 ERLIN2O94905 339 aa14.64□□□□□ -0.07
SRSF1-202ENST00000578430 TFRCP02786 760 aaKnown RBP14.64□□□□□ -0.07
SRSF1-202ENST00000578430 KRT13P13646 458 aa14.64□□□□□ -0.07
SRSF1-202ENST00000578430 PROZP22891 400 aa14.64□□□□□ -0.07
SRSF1-202ENST00000578430 SFPQP23246 707 aaKnown RBP eCLIP14.64□□□□□ -0.07
SRSF1-202ENST00000578430 CDK7P50613 346 aa14.64□□□□□ -0.07
SRSF1-202ENST00000578430 POU5F1Q01860 360 aaKnown RBP14.64□□□□□ -0.07
SRSF1-202ENST00000578430 MCL1Q07820 350 aa14.64□□□□□ -0.07
SRSF1-202ENST00000578430 AMHR2Q16671 573 aa14.64□□□□□ -0.07
SRSF1-202ENST00000578430 VWA3BQ502W6 1294 aa14.64□□□□□ -0.07
SRSF1-202ENST00000578430 ATF7IP2Q5U623 682 aa14.64□□□□□ -0.07
SRSF1-202ENST00000578430 MPZL3Q6UWV2 235 aa14.64□□□□□ -0.07
SRSF1-202ENST00000578430 GPD1LQ8N335 351 aa14.64□□□□□ -0.07
SRSF1-202ENST00000578430 U2AF1L4Q8WU68 220 aaKnown RBP14.64□□□□□ -0.07
SRSF1-202ENST00000578430 PPP1R13LQ8WUF5 828 aa14.64□□□□□ -0.07
SRSF1-202ENST00000578430 BORCS6Q96GS4 357 aa14.64□□□□□ -0.07
SRSF1-202ENST00000578430 NAP1L5Q96NT1 182 aaPredicted RBP14.64□□□□□ -0.07
SRSF1-202ENST00000578430 VPS16Q9H269 839 aa14.64□□□□□ -0.07
SRSF1-202ENST00000578430 PCIF1Q9H4Z3 704 aa14.64□□□□□ -0.07
SRSF1-202ENST00000578430 AGO2Q9UKV8 859 aaKnown RBP14.64□□□□□ -0.07
SRSF1-202ENST00000578430 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.64□□□□□ -0.07
SRSF1-202ENST00000578430 MROH7Q68CQ1 1323 aa14.64□□□□□ -0.07
SRSF1-202ENST00000578430 ZNF233A6NK53 670 aa14.63□□□□□ -0.07
SRSF1-202ENST00000578430 TISP43B9A030 160 aa14.63□□□□□ -0.07
SRSF1-202ENST00000578430 MATR3P43243 847 aaKnown RBP eCLIP14.63□□□□□ -0.07
SRSF1-202ENST00000578430 GJA8P48165 433 aa14.63□□□□□ -0.07
SRSF1-202ENST00000578430 CASP4P49662 377 aa14.63□□□□□ -0.07
SRSF1-202ENST00000578430 SNX17Q15036 470 aa14.63□□□□□ -0.07
SRSF1-202ENST00000578430 TMEM132AQ24JP5 1023 aa14.63□□□□□ -0.07
SRSF1-202ENST00000578430 FAM26DQ5JW98 314 aa14.63□□□□□ -0.07
SRSF1-202ENST00000578430 FKBP15Q5T1M5 1219 aa14.63□□□□□ -0.07
SRSF1-202ENST00000578430 FAM43BQ6ZT52 329 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms