RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 JAMLQ86YT9 394 aa11.62□□□□□ -0.55
RNF43-203ENST00000577716 PRPF38AQ8NAV1 312 aaKnown RBP11.62□□□□□ -0.55
RNF43-203ENST00000577716 SLC30A5Q8TAD4 765 aa11.62□□□□□ -0.55
RNF43-203ENST00000577716 GSDMBQ8TAX9 411 aa11.62□□□□□ -0.55
RNF43-203ENST00000577716 ARL8AQ96BM9 186 aa11.62□□□□□ -0.55
RNF43-203ENST00000577716 FAF2Q96CS3 445 aa11.62□□□□□ -0.55
RNF43-203ENST00000577716 XPO6Q96QU8 1125 aaKnown RBP11.62□□□□□ -0.55
RNF43-203ENST00000577716 TRIM4Q9C037 500 aa11.62□□□□□ -0.55
RNF43-203ENST00000577716 PCSK1NQ9UHG2 260 aa11.62□□□□□ -0.55
RNF43-203ENST00000577716 SUGT1Q9Y2Z0 365 aa11.62□□□□□ -0.55
RNF43-203ENST00000577716 ALG6Q9Y672 507 aa11.62□□□□□ -0.55
RNF43-203ENST00000577716 TCRBV5S4A2TA0A5A2 114 aa11.62□□□□□ -0.55
RNF43-203ENST00000577716 CFAP73A6NFT4 308 aa11.62□□□□□ -0.55
RNF43-203ENST00000577716 CALB1P05937 261 aa11.62□□□□□ -0.55
RNF43-203ENST00000577716 TFDP2Q14188 446 aa11.62□□□□□ -0.55
RNF43-203ENST00000577716 ZBED8Q8IZ13 594 aa11.62□□□□□ -0.55
RNF43-203ENST00000577716 KCNV2Q8TDN2 545 aa11.62□□□□□ -0.55
RNF43-203ENST00000577716 RPF1Q9H9Y2 349 aaKnown RBP11.62□□□□□ -0.55
RNF43-203ENST00000577716 G3BP2Q9UN86 482 aaKnown RBP11.62□□□□□ -0.55
RNF43-203ENST00000577716 KIF3CO14782 793 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 SASH3O75995 380 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 FAM107AO95990 144 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 KCNJ1P48048 391 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 PMS1P54277 932 aaKnown RBP11.61□□□□□ -0.55
RNF43-203ENST00000577716 PDIA2Q13087 525 aaKnown RBP11.61□□□□□ -0.55
RNF43-203ENST00000577716 DRP2Q13474 957 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 ATG16L1Q676U5 607 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 SWSAP1Q6NVH7 229 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 KRT27Q7Z3Y8 459 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 ADGRA1Q86SQ6 560 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 C9orf72Q96LT7 481 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 PPP1R16BQ96T49 567 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 CYTH2Q99418 400 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 NACA2Q9H009 215 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 NBPF3Q9H094 633 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 SEMA6BQ9H3T3 888 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 RNF146Q9NTX7 359 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 ARHGAP23Q9P227 1491 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 A0A087X0B3 334 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 MAP3K7O43318 606 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 SPAG7O75391 227 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 PRLRP16471 622 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 SFNP31947 248 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 HSPA9P38646 679 aaKnown RBP11.61□□□□□ -0.55
RNF43-203ENST00000577716 GABPAQ06546 454 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 LMBRD2Q68DH5 695 aaPredicted RBP11.61□□□□□ -0.55
RNF43-203ENST00000577716 ENOSF1Q7L5Y1 443 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 SP8Q8IXZ3 490 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 ATL2Q8NHH9 583 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 CYFIP2Q96F07 1278 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 PRMT1Q99873 361 aaKnown RBP11.61□□□□□ -0.55
RNF43-203ENST00000577716 ERP44Q9BS26 406 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 ECT2Q9H8V3 914 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 ZFP69BQ9UJL9 534 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 GPR75-ASB3A0A0A6YYF3 556 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 PHF2O75151 1096 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 TMEM253P0C7T8 217 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 CYP11B2P19099 503 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 MAPK6Q16659 721 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 AGBL2Q5U5Z8 902 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 GJB7Q6PEY0 223 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 SEC16BQ96JE7 1060 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 HAUS2Q9NVX0 235 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 DBR1Q9UK59 544 aaKnown RBP11.61□□□□□ -0.55
RNF43-203ENST00000577716 HEY1Q9Y5J3 304 aa11.61□□□□□ -0.55
RNF43-203ENST00000577716 HAUS5O94927 633 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 NCF2P19878 526 aaPredicted RBP11.6□□□□□ -0.55
RNF43-203ENST00000577716 PPP4CP60510 307 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 ITKQ08881 620 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 CRLF3Q8IUI8 442 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 CCDC117Q8IWD4 279 aaPredicted RBP11.6□□□□□ -0.55
RNF43-203ENST00000577716 HSPBP1Q9NZL4 362 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 NYAP2Q9P242 653 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 RAB21Q9UL25 225 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 CDH16O75309 829 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 HSD17B3P37058 310 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 POLE2P56282 527 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 RBBP5Q15291 538 aaKnown RBP11.6□□□□□ -0.55
RNF43-203ENST00000577716 PTGISQ16647 500 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 LONRF1Q17RB8 773 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 PRR5LQ6MZQ0 368 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 WDR75Q8IWA0 830 aaKnown RBP11.6□□□□□ -0.55
RNF43-203ENST00000577716 SULF1Q8IWU6 871 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 DCLK2Q8N568 766 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 PPM1NQ8N819 430 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 ADAM33Q9BZ11 813 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 UVRAGQ9P2Y5 699 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 TLK1Q9UKI8 766 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 XPOTO43592 962 aaKnown RBP11.6□□□□□ -0.55
RNF43-203ENST00000577716 TBXAS1P24557 533 aaPredicted RBP11.6□□□□□ -0.55
RNF43-203ENST00000577716 SH3BGRP55822 239 aaPredicted RBP11.6□□□□□ -0.55
RNF43-203ENST00000577716 COG7P83436 770 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 KLHL38Q2WGJ6 581 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 ZNF699Q32M78 642 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 SPATA21Q7Z572 469 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 CATSPER3Q86XQ3 398 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 HIPK4Q8NE63 616 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 NSUN6Q8TEA1 469 aaKnown RBP11.6□□□□□ -0.55
RNF43-203ENST00000577716 CASKIN2Q8WXE0 1202 aa11.6□□□□□ -0.55
RNF43-203ENST00000577716 KLC2Q9H0B6 622 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms