RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 TPRP12270 2363 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 TLR3O15455 904 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 ARHGEF15O94989 841 aa12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 IDEP14735 1019 aa12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 GPC3P51654 580 aa12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 CLCN3P51790 818 aa12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 EFNA5P52803 228 aa12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 PEX3P56589 373 aa12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 NLRP12P59046 1061 aa12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 CACNB1Q02641 598 aaPredicted RBP12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 MGAT3Q09327 533 aa12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 RAD51AP2Q09MP3 1159 aa12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 DMP1Q13316 513 aaPredicted RBP12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 CAPSQ13938 189 aa12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 TFDP1Q14186 410 aa12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 FAM187BQ17R55 369 aa12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 FAM26FQ5R3K3 315 aa12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 SRGAP1Q7Z6B7 1085 aa12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 RSPH3Q86UC2 560 aa12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 SFR1Q86XK3 245 aa12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 GUF1Q8N442 669 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 METTL13Q8N6R0 699 aa12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 KIAA0895Q8NCT3 520 aa12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 CAGE1Q8TC20 777 aa12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 ASAP3Q8TDY4 903 aa12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 ARNTL2Q8WYA1 636 aa12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 DHX38Q92620 1227 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 ERCC4Q92889 916 aaPredicted RBP12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 ZBTB10Q96DT7 871 aa12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 MAP7D2Q96T17 732 aa12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 FZD8Q9H461 694 aa12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 EXOC1Q9NV70 894 aa12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 PCDHB13Q9Y5F0 798 aa12.26□□□□□ -0.45
CDK5RAP3-204ENST00000577664 KMT2EQ8IZD2 1858 aa12.25□□□□□ -0.45
CDK5RAP3-204ENST00000577664 GVINP1Q7Z2Y8 2422 aa12.25□□□□□ -0.45
CDK5RAP3-204ENST00000577664 PPP1R3GB7ZBB8 358 aa12.25□□□□□ -0.45
CDK5RAP3-204ENST00000577664 PITPNM1O00562 1244 aa12.25□□□□□ -0.45
CDK5RAP3-204ENST00000577664 KIF20AO95235 890 aa12.25□□□□□ -0.45
CDK5RAP3-204ENST00000577664 CAVIN2O95810 425 aa12.25□□□□□ -0.45
CDK5RAP3-204ENST00000577664 KCNA5P22460 613 aa12.25□□□□□ -0.45
CDK5RAP3-204ENST00000577664 CRYBB1P53674 252 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP3-204ENST00000577664 SNRPFP62306 86 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-204ENST00000577664 FAM47CQ5HY64 1035 aa12.25□□□□□ -0.45
CDK5RAP3-204ENST00000577664 MAEAQ7L5Y9 396 aa12.25□□□□□ -0.45
CDK5RAP3-204ENST00000577664 HAUS6Q7Z4H7 955 aa12.25□□□□□ -0.45
CDK5RAP3-204ENST00000577664 RPUSD2Q8IZ73 545 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-204ENST00000577664 ADSSL1Q8N142 457 aa12.25□□□□□ -0.45
CDK5RAP3-204ENST00000577664 SCFD1Q8WVM8 642 aa12.25□□□□□ -0.45
CDK5RAP3-204ENST00000577664 DNAJB3Q8WWF6 145 aa12.25□□□□□ -0.45
CDK5RAP3-204ENST00000577664 CELF4Q9BZC1 486 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-204ENST00000577664 INO80BQ9C086 356 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP3-204ENST00000577664 CCDC113Q9H0I3 377 aa12.25□□□□□ -0.45
CDK5RAP3-204ENST00000577664 C2orf40Q9H1Z8 148 aa12.25□□□□□ -0.45
CDK5RAP3-204ENST00000577664 MRPL44Q9H9J2 332 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-204ENST00000577664 POLD4Q9HCU8 107 aa12.25□□□□□ -0.45
CDK5RAP3-204ENST00000577664 KMT5AQ9NQR1 393 aa12.25□□□□□ -0.45
CDK5RAP3-204ENST00000577664 TRMT13Q9NUP7 481 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-204ENST00000577664 UBE4BO95155 1302 aa12.25□□□□□ -0.45
CDK5RAP3-204ENST00000577664 MYH11P35749 1972 aa12.25□□□□□ -0.45
CDK5RAP3-204ENST00000577664 PARNO95453 639 aaKnown RBP12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 PIGRP01833 764 aa12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 CCDC192P0DO97 292 aa12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 ERCC5P28715 1186 aaPredicted RBP12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 HOXD13P35453 343 aa12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 PRCPP42785 496 aa12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 NLRP11P59045 1033 aaKnown RBP12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 NFIL3Q16649 462 aa12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 UMODL1Q5DID0 1318 aa12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 CENPPQ6IPU0 288 aa12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 TRAF7Q6Q0C0 670 aa12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 SASS6Q6UVJ0 657 aa12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 PPP4R3CPQ6ZMV5 832 aa12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 STXBP4Q6ZWJ1 553 aa12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 TAS1R3Q7RTX0 852 aa12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 RHPN2Q8IUC4 686 aa12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 KSR1Q8IVT5 923 aa12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 ADGRA3Q8IWK6 1321 aa12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 RNF149Q8NC42 400 aa12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 PHOSPHO2Q8TCD6 241 aa12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 WNT8BQ93098 351 aa12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 DHTKD1Q96HY7 919 aaPredicted RBP12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 PRIMPOLQ96LW4 560 aa12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 SLC9A7Q96T83 725 aa12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 TRPV6Q9H1D0 765 aa12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 HIPK3Q9H422 1215 aa12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 TMEM206Q9H813 350 aa12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 SLC39A2Q9NP94 309 aa12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 FAM86C1Q9NVL1 165 aa12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 ANO10Q9NW15 660 aa12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 AKT3Q9Y243 479 aa12.24□□□□□ -0.45
CDK5RAP3-204ENST00000577664 A0A087WZ62 844 aa12.23□□□□□ -0.45
CDK5RAP3-204ENST00000577664 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP3-204ENST00000577664 SYCE3A1L190 88 aa12.23□□□□□ -0.45
CDK5RAP3-204ENST00000577664 K7ERI5 159 aa12.23□□□□□ -0.45
CDK5RAP3-204ENST00000577664 CHRNA1P02708 482 aa12.23□□□□□ -0.45
CDK5RAP3-204ENST00000577664 VTNP04004 478 aa12.23□□□□□ -0.45
CDK5RAP3-204ENST00000577664 PFKMP08237 780 aa12.23□□□□□ -0.45
CDK5RAP3-204ENST00000577664 CKBP12277 381 aa12.23□□□□□ -0.45
CDK5RAP3-204ENST00000577664 DARSP14868 501 aaKnown RBP12.23□□□□□ -0.45
CDK5RAP3-204ENST00000577664 EIF4BP23588 611 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms