RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 PLPP4Q5VZY2 271 aa11.21□□□□□ -0.61
SS18-207ENST00000577636 ENOX1Q8TC92 643 aaKnown RBP11.21□□□□□ -0.61
SS18-207ENST00000577636 SLC5A5Q92911 643 aa11.21□□□□□ -0.61
SS18-207ENST00000577636 GPRASP2Q96D09 838 aa11.21□□□□□ -0.61
SS18-207ENST00000577636 ASIC4Q96FT7 647 aa11.21□□□□□ -0.61
SS18-207ENST00000577636 MRFAP1L1Q96HT8 127 aa11.21□□□□□ -0.61
SS18-207ENST00000577636 PPP1R16BQ96T49 567 aa11.21□□□□□ -0.61
SS18-207ENST00000577636 MMTAG2Q9BU76 263 aaKnown RBP11.21□□□□□ -0.61
SS18-207ENST00000577636 TRIM9Q9C026 710 aa11.21□□□□□ -0.61
SS18-207ENST00000577636 TMX1Q9H3N1 280 aa11.21□□□□□ -0.61
SS18-207ENST00000577636 AAASQ9NRG9 546 aa11.21□□□□□ -0.61
SS18-207ENST00000577636 TBC1D22BQ9NU19 505 aa11.21□□□□□ -0.61
SS18-207ENST00000577636 HCSTQ9UBK5 93 aa11.21□□□□□ -0.61
SS18-207ENST00000577636 KIAA1024Q9UPX6 916 aa11.21□□□□□ -0.61
SS18-207ENST00000577636 ZNF318Q5VUA4 2279 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 TTC3P53804 2025 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 PVALEFA0A1B0GWK0 134 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 DENND3A2RUS2 1198 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 IPO5O00410 1097 aaKnown RBP11.2□□□□□ -0.62
SS18-207ENST00000577636 PSMA7O14818 248 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 MAFGO15525 162 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 FGF18O76093 207 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 RHOBTB3O94955 611 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 KIF20AO95235 890 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 MUTP22033 750 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 RPA1P27694 616 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 CA8P35219 290 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 KRT76Q01546 638 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 PSMD2Q13200 908 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 PPP2R5CQ13362 524 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 PLCB4Q15147 1175 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 PTPN21Q16825 1174 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 DUSP6Q16828 381 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 KLHL10Q6JEL2 608 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 CRIPAKQ8N1N5 446 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 VN1R2Q8NFZ6 395 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 LENG9Q96B70 501 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 PNMA5Q96PV4 448 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 PCYT2Q99447 389 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 ADAM2Q99965 735 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 POLR3CQ9BUI4 534 aaPredicted RBP11.2□□□□□ -0.62
SS18-207ENST00000577636 IRF2BPLQ9H1B7 796 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 TUFT1Q9NNX1 390 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 TYW1Q9NV66 732 aaKnown RBP11.2□□□□□ -0.62
SS18-207ENST00000577636 SLC9A2Q9UBY0 812 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 PCDHA2Q9Y5H9 948 aa11.2□□□□□ -0.62
SS18-207ENST00000577636 ATG2AQ2TAZ0 1938 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 IGSF9BQ9UPX0 1349 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 BICDL2A1A5D9 508 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 MGEA5O60502 916 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 RPS6KA5O75582 802 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 RPLP2P05387 115 aaKnown RBP11.19□□□□□ -0.62
SS18-207ENST00000577636 SRGAP2BP0DMP2 458 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 FGFR1P11362 822 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 ATF7P17544 494 aaPredicted RBP11.19□□□□□ -0.62
SS18-207ENST00000577636 BMP6P22004 513 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 MSNP26038 577 aaKnown RBP11.19□□□□□ -0.62
SS18-207ENST00000577636 KLRC1P26715 233 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 CASP1P29466 404 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 STAT5BP51692 787 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 UBE3AQ05086 875 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 SPAG1Q07617 926 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 PAK1Q13153 545 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 MCM6Q14566 821 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 KMT5BQ4FZB7 885 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 SPATA1Q5VX52 437 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 MTHFD1LQ6UB35 978 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 UNC13DQ70J99 1090 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 TRMT1LQ7Z2T5 733 aaKnown RBP11.19□□□□□ -0.62
SS18-207ENST00000577636 CCDC65Q8IXS2 484 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 COLGALT1Q8NBJ5 622 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 CYP2W1Q8TAV3 490 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 SUSD6Q92537 303 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 GJA10Q969M2 543 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 RIPOR3Q96MK2 946 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 CDCA3Q99618 268 aaPredicted RBP11.19□□□□□ -0.62
SS18-207ENST00000577636 CDHR5Q9HBB8 845 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 JPH1Q9HDC5 661 aaPredicted RBP11.19□□□□□ -0.62
SS18-207ENST00000577636 JADE2Q9NQC1 790 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 ENTPD7Q9NQZ7 604 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 KCNH7Q9NS40 1196 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 PUF60Q9UHX1 559 aaKnown RBP11.19□□□□□ -0.62
SS18-207ENST00000577636 RWDD2AQ9UIY3 292 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 NOC2LQ9Y3T9 749 aaKnown RBP11.19□□□□□ -0.62
SS18-207ENST00000577636 NFE2L3Q9Y4A8 694 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 UBIAD1Q9Y5Z9 338 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 SQORQ9Y6N5 450 aa11.19□□□□□ -0.62
SS18-207ENST00000577636 DDX39AO00148 427 aaKnown RBP11.18□□□□□ -0.62
SS18-207ENST00000577636 CHMP2AO43633 222 aa11.18□□□□□ -0.62
SS18-207ENST00000577636 NRDCO43847 1150 aa11.18□□□□□ -0.62
SS18-207ENST00000577636 PSMD10O75832 226 aa11.18□□□□□ -0.62
SS18-207ENST00000577636 PLA2G4BP0C869 781 aa11.18□□□□□ -0.62
SS18-207ENST00000577636 IDEP14735 1019 aa11.18□□□□□ -0.62
SS18-207ENST00000577636 SPIRE1Q08AE8 756 aa11.18□□□□□ -0.62
SS18-207ENST00000577636 EPHA7Q15375 998 aa11.18□□□□□ -0.62
SS18-207ENST00000577636 FILIP1LQ4L180 1135 aa11.18□□□□□ -0.62
SS18-207ENST00000577636 ANKRD54Q6NXT1 300 aa11.18□□□□□ -0.62
SS18-207ENST00000577636 MIER3Q7Z3K6 550 aa11.18□□□□□ -0.62
SS18-207ENST00000577636 GPBP1Q86WP2 473 aa11.18□□□□□ -0.62
SS18-207ENST00000577636 CATSPER3Q86XQ3 398 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms