RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 C14orf93Q9H972 538 aaKnown RBP3.86□□□□□ -1.79
TOP2A-202ENST00000577541 RNF181Q9P0P0 153 aa3.86□□□□□ -1.79
TOP2A-202ENST00000577541 LRP12Q9Y561 859 aa3.86□□□□□ -1.79
TOP2A-202ENST00000577541 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.85□□□□□ -1.79
TOP2A-202ENST00000577541 PRR23D1E9PI22 279 aaPredicted RBP3.85□□□□□ -1.79
TOP2A-202ENST00000577541 H3BNC9 293 aa3.85□□□□□ -1.79
TOP2A-202ENST00000577541 SCDO00767 359 aa3.85□□□□□ -1.79
TOP2A-202ENST00000577541 GSTA4O15217 222 aa3.85□□□□□ -1.79
TOP2A-202ENST00000577541 SPDEFO95238 335 aa3.85□□□□□ -1.79
TOP2A-202ENST00000577541 PRR23D2P0DMB1 279 aaPredicted RBP3.85□□□□□ -1.79
TOP2A-202ENST00000577541 ITGAMP11215 1152 aa3.85□□□□□ -1.79
TOP2A-202ENST00000577541 FOXG1P55316 489 aaPredicted RBP3.85□□□□□ -1.79
TOP2A-202ENST00000577541 ALDH6A1Q02252 535 aaKnown RBP3.85□□□□□ -1.79
TOP2A-202ENST00000577541 EZH2Q15910 746 aaKnown RBP3.85□□□□□ -1.79
TOP2A-202ENST00000577541 KRTAP27-1Q3LI81 207 aa3.85□□□□□ -1.79
TOP2A-202ENST00000577541 C11orf87Q6NUJ2 197 aa3.85□□□□□ -1.79
TOP2A-202ENST00000577541 MTDHQ86UE4 582 aaKnown RBP3.85□□□□□ -1.79
TOP2A-202ENST00000577541 NOSTRINQ8IVI9 506 aa3.85□□□□□ -1.79
TOP2A-202ENST00000577541 FOXRED1Q96CU9 486 aaPredicted RBP3.85□□□□□ -1.79
TOP2A-202ENST00000577541 IPO9Q96P70 1041 aaKnown RBP3.85□□□□□ -1.79
TOP2A-202ENST00000577541 OSBPL2Q9H1P3 480 aa3.85□□□□□ -1.79
TOP2A-202ENST00000577541 SLC52A2Q9HAB3 445 aa3.85□□□□□ -1.79
TOP2A-202ENST00000577541 KCNH7Q9NS40 1196 aa3.85□□□□□ -1.79
TOP2A-202ENST00000577541 DIRC3C9JPN6 131 aa3.84□□□□□ -1.79
TOP2A-202ENST00000577541 CRTAMO95727 393 aa3.84□□□□□ -1.79
TOP2A-202ENST00000577541 ZSCAN20P17040 1043 aaPredicted RBP3.84□□□□□ -1.79
TOP2A-202ENST00000577541 RNASE9P60153 205 aaKnown RBP3.84□□□□□ -1.79
TOP2A-202ENST00000577541 GUCY1A3Q02108 690 aa3.84□□□□□ -1.79
TOP2A-202ENST00000577541 FAM47CQ5HY64 1035 aa3.84□□□□□ -1.79
TOP2A-202ENST00000577541 BMP8AQ7Z5Y6 402 aa3.84□□□□□ -1.79
TOP2A-202ENST00000577541 DDB2Q92466 427 aa3.84□□□□□ -1.79
TOP2A-202ENST00000577541 SCLYQ96I15 445 aa3.84□□□□□ -1.79
TOP2A-202ENST00000577541 SRPK1Q96SB4 655 aaKnown RBP3.84□□□□□ -1.79
TOP2A-202ENST00000577541 DNAJC7Q99615 494 aa3.84□□□□□ -1.79
TOP2A-202ENST00000577541 FOXB1Q99853 325 aa3.84□□□□□ -1.79
TOP2A-202ENST00000577541 LSM14BQ9BX40 385 aaKnown RBP3.84□□□□□ -1.79
TOP2A-202ENST00000577541 ENKD1Q9H0I2 346 aa3.84□□□□□ -1.79
TOP2A-202ENST00000577541 NCOA5Q9HCD5 579 aaKnown RBP3.84□□□□□ -1.79
TOP2A-202ENST00000577541 TRIM39Q9HCM9 518 aa3.84□□□□□ -1.79
TOP2A-202ENST00000577541 PCDHA8Q9Y5H6 950 aa3.84□□□□□ -1.79
TOP2A-202ENST00000577541 CCDC85CA6NKD9 419 aa3.83□□□□□ -1.8
TOP2A-202ENST00000577541 MTSS1O43312 755 aa3.83□□□□□ -1.8
TOP2A-202ENST00000577541 NTN1O95631 604 aa3.83□□□□□ -1.8
TOP2A-202ENST00000577541 SRGAP2CP0DJJ0 459 aa3.83□□□□□ -1.8
TOP2A-202ENST00000577541 HNRNPLP14866 589 aaKnown RBP eCLIP3.83□□□□□ -1.8
TOP2A-202ENST00000577541 KCNA6P17658 529 aa3.83□□□□□ -1.8
TOP2A-202ENST00000577541 SDHAP31040 664 aa3.83□□□□□ -1.8
TOP2A-202ENST00000577541 NFE2L2Q16236 605 aa3.83□□□□□ -1.8
TOP2A-202ENST00000577541 CATSPEREQ5SY80 951 aa3.83□□□□□ -1.8
TOP2A-202ENST00000577541 OTOP1Q7RTM1 612 aa3.83□□□□□ -1.8
TOP2A-202ENST00000577541 PTF1AQ7RTS3 328 aa3.83□□□□□ -1.8
TOP2A-202ENST00000577541 OVCH1Q7RTY7 1134 aa3.83□□□□□ -1.8
TOP2A-202ENST00000577541 RTN4RL1Q86UN2 441 aaPredicted RBP3.83□□□□□ -1.8
TOP2A-202ENST00000577541 SYT12Q8IV01 421 aa3.83□□□□□ -1.8
TOP2A-202ENST00000577541 LILRB2Q8N423 598 aa3.83□□□□□ -1.8
TOP2A-202ENST00000577541 ERCC4Q92889 916 aaPredicted RBP3.83□□□□□ -1.8
TOP2A-202ENST00000577541 DYDC2Q96IM9 177 aa3.83□□□□□ -1.8
TOP2A-202ENST00000577541 SLC17A6Q9P2U8 582 aa3.83□□□□□ -1.8
TOP2A-202ENST00000577541 PPP1R1BQ9UD71 204 aaPredicted RBP3.83□□□□□ -1.8
TOP2A-202ENST00000577541 HDAC5Q9UQL6 1122 aa3.83□□□□□ -1.8
TOP2A-202ENST00000577541 PCDHA9Q9Y5H5 950 aa3.83□□□□□ -1.8
TOP2A-202ENST00000577541 PTCH2Q9Y6C5 1203 aa3.83□□□□□ -1.8
TOP2A-202ENST00000577541 TCRBV16S1A1N1A0A5B0 115 aa3.82□□□□□ -1.8
TOP2A-202ENST00000577541 CCDC66A2RUB6 948 aa3.82□□□□□ -1.8
TOP2A-202ENST00000577541 PLD2O14939 933 aa3.82□□□□□ -1.8
TOP2A-202ENST00000577541 TP73O15350 636 aa3.82□□□□□ -1.8
TOP2A-202ENST00000577541 FDXRP22570 491 aa3.82□□□□□ -1.8
TOP2A-202ENST00000577541 RGS3P49796 1198 aa3.82□□□□□ -1.8
TOP2A-202ENST00000577541 CCT4P50991 539 aaKnown RBP3.82□□□□□ -1.8
TOP2A-202ENST00000577541 NHLH2Q02577 135 aa3.82□□□□□ -1.8
TOP2A-202ENST00000577541 SCAPQ12770 1279 aa3.82□□□□□ -1.8
TOP2A-202ENST00000577541 RESTQ13127 1097 aa3.82□□□□□ -1.8
TOP2A-202ENST00000577541 FNDC3BQ53EP0 1204 aaKnown RBP3.82□□□□□ -1.8
TOP2A-202ENST00000577541 DLG3Q92796 817 aa3.82□□□□□ -1.8
TOP2A-202ENST00000577541 ZNF48Q96MX3 618 aaPredicted RBP3.82□□□□□ -1.8
TOP2A-202ENST00000577541 FOXJ2Q9P0K8 574 aa3.82□□□□□ -1.8
TOP2A-202ENST00000577541 ARPP21Q9UBL0 812 aaPredicted RBP3.82□□□□□ -1.8
TOP2A-202ENST00000577541 DNAI1Q9UI46 699 aa3.82□□□□□ -1.8
TOP2A-202ENST00000577541 CDK11AQ9UQ88 783 aaPredicted RBP3.82□□□□□ -1.8
TOP2A-202ENST00000577541 MAP3K2Q9Y2U5 619 aa3.82□□□□□ -1.8
TOP2A-202ENST00000577541 ZNF804BA4D1E1 1349 aa3.81□□□□□ -1.8
TOP2A-202ENST00000577541 SPATA31D3P0C874 917 aa3.81□□□□□ -1.8
TOP2A-202ENST00000577541 MECP2P51608 486 aaKnown RBP3.81□□□□□ -1.8
TOP2A-202ENST00000577541 Q6ZNX1 250 aa3.81□□□□□ -1.8
TOP2A-202ENST00000577541 SPATA31D4Q6ZUB0 917 aa3.81□□□□□ -1.8
TOP2A-202ENST00000577541 DOK3Q7L591 496 aa3.81□□□□□ -1.8
TOP2A-202ENST00000577541 ZBTB8BQ8NAP8 495 aaPredicted RBP3.81□□□□□ -1.8
TOP2A-202ENST00000577541 UBXN4Q92575 508 aa3.81□□□□□ -1.8
TOP2A-202ENST00000577541 DPF1Q92782 380 aa3.81□□□□□ -1.8
TOP2A-202ENST00000577541 Q96MF0 132 aa3.81□□□□□ -1.8
TOP2A-202ENST00000577541 VPS33BQ9H267 617 aa3.81□□□□□ -1.8
TOP2A-202ENST00000577541 ACSS2Q9NR19 701 aa3.81□□□□□ -1.8
TOP2A-202ENST00000577541 POLR3BQ9NW08 1133 aaPredicted RBP3.81□□□□□ -1.8
TOP2A-202ENST00000577541 TMEM260Q9NX78 707 aa3.81□□□□□ -1.8
TOP2A-202ENST00000577541 KCMF1Q9P0J7 381 aa3.81□□□□□ -1.8
TOP2A-202ENST00000577541 B3GALT1Q9Y5Z6 326 aa3.81□□□□□ -1.8
TOP2A-202ENST00000577541 NOTCH4Q99466 2003 aa3.8□□□□□ -1.8
TOP2A-202ENST00000577541 RFPL3O75679 317 aa3.8□□□□□ -1.8
TOP2A-202ENST00000577541 DNM2P50570 870 aa3.8□□□□□ -1.8
TOP2A-202ENST00000577541 TMEM132BQ14DG7 1078 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms