RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 DDIT3P35638 169 aa15.4■□□□□ 0.06
GGA3-203ENST00000577435 ALDH7A1P49419 539 aaKnown RBP15.4■□□□□ 0.06
GGA3-203ENST00000577435 PEX3P56589 373 aa15.4■□□□□ 0.06
GGA3-203ENST00000577435 CEBPZQ03701 1054 aaKnown RBP15.4■□□□□ 0.06
GGA3-203ENST00000577435 DMP1Q13316 513 aaPredicted RBP15.4■□□□□ 0.06
GGA3-203ENST00000577435 KARSQ15046 597 aaKnown RBP15.4■□□□□ 0.06
GGA3-203ENST00000577435 ARSHQ5FYA8 562 aa15.4■□□□□ 0.06
GGA3-203ENST00000577435 HACE1Q8IYU2 909 aa15.4■□□□□ 0.06
GGA3-203ENST00000577435 SLC39A11Q8N1S5 342 aa15.4■□□□□ 0.06
GGA3-203ENST00000577435 LINC00301Q8NCQ3 95 aa15.4■□□□□ 0.06
GGA3-203ENST00000577435 URGCPQ8TCY9 931 aa15.4■□□□□ 0.06
GGA3-203ENST00000577435 LRRC15Q8TF66 581 aa15.4■□□□□ 0.06
GGA3-203ENST00000577435 RAD54LQ92698 747 aa15.4■□□□□ 0.06
GGA3-203ENST00000577435 KCNN1Q92952 543 aa15.4■□□□□ 0.06
GGA3-203ENST00000577435 EPSTI1Q96J88 318 aa15.4■□□□□ 0.06
GGA3-203ENST00000577435 ZNF396Q96N95 335 aaPredicted RBP15.4■□□□□ 0.06
GGA3-203ENST00000577435 TRIM6Q9C030 488 aaPredicted RBP15.4■□□□□ 0.06
GGA3-203ENST00000577435 TDRD15B5MCY1 1934 aaKnown RBP15.39■□□□□ 0.05
GGA3-203ENST00000577435 CCDC169A6NNP5 214 aa15.39■□□□□ 0.05
GGA3-203ENST00000577435 FSCN2O14926 492 aa15.39■□□□□ 0.05
GGA3-203ENST00000577435 SSBP05455 408 aaKnown RBP eCLIP15.39■□□□□ 0.05
GGA3-203ENST00000577435 GALTP07902 379 aa15.39■□□□□ 0.05
GGA3-203ENST00000577435 PLS3P13797 630 aa15.39■□□□□ 0.05
GGA3-203ENST00000577435 PLCG1P19174 1290 aa15.39■□□□□ 0.05
GGA3-203ENST00000577435 BCAR1P56945 870 aa15.39■□□□□ 0.05
GGA3-203ENST00000577435 KRT17Q04695 432 aa15.39■□□□□ 0.05
GGA3-203ENST00000577435 CTC1Q2NKJ3 1217 aa15.39■□□□□ 0.05
GGA3-203ENST00000577435 NT5DC1Q5TFE4 455 aa15.39■□□□□ 0.05
GGA3-203ENST00000577435 ATL3Q6DD88 541 aa15.39■□□□□ 0.05
GGA3-203ENST00000577435 USP49Q70CQ1 688 aa15.39■□□□□ 0.05
GGA3-203ENST00000577435 KRI1Q8N9T8 703 aaKnown RBP15.39■□□□□ 0.05
GGA3-203ENST00000577435 SYMPKQ92797 1274 aaKnown RBP15.39■□□□□ 0.05
GGA3-203ENST00000577435 PPP2R3CQ969Q6 453 aa15.39■□□□□ 0.05
GGA3-203ENST00000577435 PABPC5Q96DU9 382 aaKnown RBP15.39■□□□□ 0.05
GGA3-203ENST00000577435 CLIC6Q96NY7 704 aa15.39■□□□□ 0.05
GGA3-203ENST00000577435 TMEM175Q9BSA9 504 aa15.39■□□□□ 0.05
GGA3-203ENST00000577435 KIFC3Q9BVG8 833 aa15.39■□□□□ 0.05
GGA3-203ENST00000577435 PDZD7Q9H5P4 517 aa15.39■□□□□ 0.05
GGA3-203ENST00000577435 KMT5AQ9NQR1 393 aa15.39■□□□□ 0.05
GGA3-203ENST00000577435 TLR9Q9NR96 1032 aa15.39■□□□□ 0.05
GGA3-203ENST00000577435 CCDC39Q9UFE4 941 aa15.39■□□□□ 0.05
GGA3-203ENST00000577435 ODF2LQ9ULJ1 636 aa15.39■□□□□ 0.05
GGA3-203ENST00000577435 INPP5FQ9Y2H2 1132 aa15.39■□□□□ 0.05
GGA3-203ENST00000577435 ARL5CA6NH57 179 aa15.38■□□□□ 0.05
GGA3-203ENST00000577435 SFI1A8K8P3 1242 aa15.38■□□□□ 0.05
GGA3-203ENST00000577435 PPP6R2O75170 966 aa15.38■□□□□ 0.05
GGA3-203ENST00000577435 DDHD2O94830 711 aa15.38■□□□□ 0.05
GGA3-203ENST00000577435 NPTXRO95502 500 aa15.38■□□□□ 0.05
GGA3-203ENST00000577435 YEATS4O95619 227 aa15.38■□□□□ 0.05
GGA3-203ENST00000577435 F13A1P00488 732 aa15.38■□□□□ 0.05
GGA3-203ENST00000577435 EDN1P05305 212 aa15.38■□□□□ 0.05
GGA3-203ENST00000577435 BMP1P13497 986 aa15.38■□□□□ 0.05
GGA3-203ENST00000577435 IRS1P35568 1242 aa15.38■□□□□ 0.05
GGA3-203ENST00000577435 AFF1P51825 1210 aaKnown RBP15.38■□□□□ 0.05
GGA3-203ENST00000577435 SMTNP53814 917 aa15.38■□□□□ 0.05
GGA3-203ENST00000577435 ERVFC1P60507 584 aa15.38■□□□□ 0.05
GGA3-203ENST00000577435 RNASELQ05823 741 aaKnown RBP15.38■□□□□ 0.05
GGA3-203ENST00000577435 CDR2LQ86X02 465 aaPredicted RBP15.38■□□□□ 0.05
GGA3-203ENST00000577435 ZNF280BQ86YH2 543 aa15.38■□□□□ 0.05
GGA3-203ENST00000577435 GSTCDQ8NEC7 633 aa15.38■□□□□ 0.05
GGA3-203ENST00000577435 LARP4BQ92615 738 aaKnown RBP15.38■□□□□ 0.05
GGA3-203ENST00000577435 GAD1Q99259 594 aa15.38■□□□□ 0.05
GGA3-203ENST00000577435 ADPGKQ9BRR6 497 aa15.38■□□□□ 0.05
GGA3-203ENST00000577435 NXF3Q9H4D5 531 aaKnown RBP15.38■□□□□ 0.05
GGA3-203ENST00000577435 UBE2ZQ9H832 354 aaPredicted RBP15.38■□□□□ 0.05
GGA3-203ENST00000577435 NGRNQ9NPE2 291 aaKnown RBP15.38■□□□□ 0.05
GGA3-203ENST00000577435 LARSQ9P2J5 1176 aaKnown RBP15.38■□□□□ 0.05
GGA3-203ENST00000577435 STK17AQ9UEE5 414 aa15.38■□□□□ 0.05
GGA3-203ENST00000577435 TNFSF13BQ9Y275 285 aa15.38■□□□□ 0.05
GGA3-203ENST00000577435 HES2Q9Y543 173 aa15.38■□□□□ 0.05
GGA3-203ENST00000577435 TRIP11Q15643 1979 aa15.38■□□□□ 0.05
GGA3-203ENST00000577435 TCF20Q9UGU0 1960 aaKnown RBP15.38■□□□□ 0.05
GGA3-203ENST00000577435 SPTLC2O15270 562 aa15.37■□□□□ 0.05
GGA3-203ENST00000577435 ZC3H11AO75152 810 aaKnown RBP eCLIP15.37■□□□□ 0.05
GGA3-203ENST00000577435 ALDH2P05091 517 aa15.37■□□□□ 0.05
GGA3-203ENST00000577435 SCP2P22307 547 aa15.37■□□□□ 0.05
GGA3-203ENST00000577435 TXLNAP40222 546 aa15.37■□□□□ 0.05
GGA3-203ENST00000577435 PBX3P40426 434 aa15.37■□□□□ 0.05
GGA3-203ENST00000577435 ZNF131P52739 623 aa15.37■□□□□ 0.05
GGA3-203ENST00000577435 TFF2Q03403 129 aa15.37■□□□□ 0.05
GGA3-203ENST00000577435 HYAL1Q12794 435 aa15.37■□□□□ 0.05
GGA3-203ENST00000577435 GIT2Q14161 759 aa15.37■□□□□ 0.05
GGA3-203ENST00000577435 MCM6Q14566 821 aa15.37■□□□□ 0.05
GGA3-203ENST00000577435 STK38Q15208 465 aa15.37■□□□□ 0.05
GGA3-203ENST00000577435 DCAF4L1Q3SXM0 396 aa15.37■□□□□ 0.05
GGA3-203ENST00000577435 SPECC1Q5M775 1068 aa15.37■□□□□ 0.05
GGA3-203ENST00000577435 ATF7IP2Q5U623 682 aa15.37■□□□□ 0.05
GGA3-203ENST00000577435 TAS1R3Q7RTX0 852 aa15.37■□□□□ 0.05
GGA3-203ENST00000577435 GPBP1Q86WP2 473 aa15.37■□□□□ 0.05
GGA3-203ENST00000577435 TMEM161BQ8NDZ6 487 aa15.37■□□□□ 0.05
GGA3-203ENST00000577435 RASSF8Q8NHQ8 419 aa15.37■□□□□ 0.05
GGA3-203ENST00000577435 MICAL1Q8TDZ2 1067 aa15.37■□□□□ 0.05
GGA3-203ENST00000577435 IGSF21Q96ID5 467 aa15.37■□□□□ 0.05
GGA3-203ENST00000577435 FAM193BQ96PV7 902 aaPredicted RBP15.37■□□□□ 0.05
GGA3-203ENST00000577435 ACO2Q99798 780 aaKnown RBP15.37■□□□□ 0.05
GGA3-203ENST00000577435 PTPRHQ9HD43 1115 aa15.37■□□□□ 0.05
GGA3-203ENST00000577435 MIOSQ9NXC5 875 aa15.37■□□□□ 0.05
GGA3-203ENST00000577435 TFIP11Q9UBB9 837 aaKnown RBP15.37■□□□□ 0.05
GGA3-203ENST00000577435 STK39Q9UEW8 545 aa15.37■□□□□ 0.05
GGA3-203ENST00000577435 NT5C1B-RDH14C9J2C7 533 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms