RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 S100A1P23297 94 aa9.36□□□□□ -0.91
CDH8-203ENST00000577390 PPRC1Q5VV67 1664 aaKnown RBP9.36□□□□□ -0.91
CDH8-203ENST00000577390 EVPLQ92817 2033 aa9.36□□□□□ -0.91
CDH8-203ENST00000577390 MSH2P43246 934 aa9.36□□□□□ -0.91
CDH8-203ENST00000577390 DARS2Q6PI48 645 aaKnown RBP9.36□□□□□ -0.91
CDH8-203ENST00000577390 JADE3Q92613 823 aa9.36□□□□□ -0.91
CDH8-203ENST00000577390 LENG1Q96BZ8 264 aaPredicted RBP9.36□□□□□ -0.91
CDH8-203ENST00000577390 PCDHB8Q9UN66 801 aa9.36□□□□□ -0.91
CDH8-203ENST00000577390 L1RE1Q9UN81 338 aa9.36□□□□□ -0.91
CDH8-203ENST00000577390 RUVBL2Q9Y230 463 aaKnown RBP9.36□□□□□ -0.91
CDH8-203ENST00000577390 FAM32AQ9Y421 112 aaKnown RBP9.36□□□□□ -0.91
CDH8-203ENST00000577390 CDC40O60508 579 aaKnown RBP eCLIP9.35□□□□□ -0.91
CDH8-203ENST00000577390 RBMXL2O75526 392 aaKnown RBP9.35□□□□□ -0.91
CDH8-203ENST00000577390 HSPA9P38646 679 aaKnown RBP9.35□□□□□ -0.91
CDH8-203ENST00000577390 MAPK9P45984 424 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 FBXO11Q86XK2 927 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 IPCEF1Q8WWN9 437 aaPredicted RBP9.35□□□□□ -0.91
CDH8-203ENST00000577390 DENND2AQ9ULE3 1009 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 UBA6A0AVT1 1052 aaPredicted RBP9.35□□□□□ -0.91
CDH8-203ENST00000577390 RPN1P04843 607 aaKnown RBP9.35□□□□□ -0.91
CDH8-203ENST00000577390 SFMBT2Q5VUG0 894 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 REXO1L1PQ8IX06 675 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 SH3GL1Q99961 368 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 PAG1Q9NWQ8 432 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 ADD3Q9UEY8 706 aaKnown RBP9.35□□□□□ -0.91
CDH8-203ENST00000577390 PCDHA5Q9Y5H7 936 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 PCDHA1Q9Y5I3 950 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 GOLGA8SH3BPF8 625 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 RASSF9O75901 435 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 TWF2Q6IBS0 349 aaKnown RBP9.35□□□□□ -0.91
CDH8-203ENST00000577390 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.35□□□□□ -0.91
CDH8-203ENST00000577390 KAT2BQ92831 832 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 CYTH2Q99418 400 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 SPZ1Q9BXG8 430 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 PLEKHA5Q9HAU0 1116 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 DDX20Q9UHI6 824 aaKnown RBP9.35□□□□□ -0.91
CDH8-203ENST00000577390 ERBB3P21860 1342 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 GRIN2BQ13224 1484 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 IRS4O14654 1257 aaPredicted RBP9.35□□□□□ -0.91
CDH8-203ENST00000577390 NFICP08651 508 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 CCDC166P0CW27 439 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 MLNP12872 115 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 STAT1P42224 750 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 TCP11X2Q5H9J9 407 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 BRINP3Q76B58 766 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 CCDC24Q8N4L8 307 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 NUDT16Q96DE0 195 aaKnown RBP9.35□□□□□ -0.91
CDH8-203ENST00000577390 VPS39Q96JC1 886 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 SLC12A5Q9H2X9 1139 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 RNF14Q9UBS8 474 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 APPL1Q9UKG1 709 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 BLOC1S6Q9UL45 172 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 HNRNPDLO14979 420 aaKnown RBP9.35□□□□□ -0.91
CDH8-203ENST00000577390 GRK2P25098 689 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 HDLBPQ00341 1268 aaKnown RBP9.35□□□□□ -0.91
CDH8-203ENST00000577390 MIS18BP1Q6P0N0 1132 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 STX12Q86Y82 276 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 EFHBQ8N7U6 833 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 U2AF1L4Q8WU68 220 aaKnown RBP9.35□□□□□ -0.91
CDH8-203ENST00000577390 TM6SF1Q9BZW5 370 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 SBNO1A3KN83 1393 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 SCGNO76038 276 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 DNAJC1Q96KC8 554 aaKnown RBP9.35□□□□□ -0.91
CDH8-203ENST00000577390 GID8Q9NWU2 228 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 CTNNAL1Q9UBT7 734 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 ZNF229Q9UJW7 825 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 PCDHB9Q9Y5E1 797 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 GMEB1Q9Y692 573 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 C2orf54Q08AI8 447 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 FAM178BQ8IXR5 827 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 ABCC5O15440 1437 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 CDK13Q14004 1512 aaKnown RBP9.35□□□□□ -0.91
CDH8-203ENST00000577390 COBLO75128 1261 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 CDC37Q16543 378 aaPredicted RBP9.35□□□□□ -0.91
CDH8-203ENST00000577390 HORMAD1Q86X24 394 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 LRRN4CLQ8ND94 238 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 RFWD2Q8NHY2 731 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 TRPV6Q9H1D0 765 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 ZNF556Q9HAH1 456 aa9.35□□□□□ -0.91
CDH8-203ENST00000577390 NXF1Q9UBU9 619 aaKnown RBP9.35□□□□□ -0.91
CDH8-203ENST00000577390 PA2G4Q9UQ80 394 aaKnown RBP9.35□□□□□ -0.91
CDH8-203ENST00000577390 DCTN2Q13561 401 aaKnown RBP9.34□□□□□ -0.91
CDH8-203ENST00000577390 TP53BP2Q13625 1128 aa9.34□□□□□ -0.91
CDH8-203ENST00000577390 ITIH4Q14624 930 aa9.34□□□□□ -0.91
CDH8-203ENST00000577390 KCNV1Q6PIU1 500 aa9.34□□□□□ -0.91
CDH8-203ENST00000577390 NFKBIZQ9BYH8 718 aa9.34□□□□□ -0.91
CDH8-203ENST00000577390 H0YCG3 227 aa9.34□□□□□ -0.91
CDH8-203ENST00000577390 SERPINB8P50452 374 aa9.34□□□□□ -0.91
CDH8-203ENST00000577390 RNF135Q8IUD6 432 aa9.34□□□□□ -0.91
CDH8-203ENST00000577390 SERPINI1Q99574 410 aa9.34□□□□□ -0.91
CDH8-203ENST00000577390 ETNK1Q9HBU6 452 aa9.34□□□□□ -0.91
CDH8-203ENST00000577390 LZTS1Q9Y250 596 aa9.34□□□□□ -0.91
CDH8-203ENST00000577390 POLR1DQ9Y2S0 133 aa9.34□□□□□ -0.91
CDH8-203ENST00000577390 PZPP20742 1482 aa9.34□□□□□ -0.91
CDH8-203ENST00000577390 STRNO43815 780 aa9.34□□□□□ -0.91
CDH8-203ENST00000577390 CPB1P15086 417 aa9.34□□□□□ -0.91
CDH8-203ENST00000577390 AP1B1Q10567 949 aa9.34□□□□□ -0.91
CDH8-203ENST00000577390 CREB3L3Q68CJ9 461 aa9.34□□□□□ -0.91
CDH8-203ENST00000577390 UBE2Q1Q7Z7E8 422 aa9.34□□□□□ -0.91
CDH8-203ENST00000577390 FAM53CQ9NYF3 392 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms