RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 ADCYAP1R1P41586 468 aa6.84□□□□□ -1.31
SMCHD1-202ENST00000577300 MANFP55145 182 aaKnown RBP6.84□□□□□ -1.31
SMCHD1-202ENST00000577300 MGAT5Q09328 741 aa6.84□□□□□ -1.31
SMCHD1-202ENST00000577300 PTPAQ15257 358 aa6.84□□□□□ -1.31
SMCHD1-202ENST00000577300 DALRD3Q5D0E6 543 aaKnown RBP6.84□□□□□ -1.31
SMCHD1-202ENST00000577300 FKBP9P1Q75LS8 142 aa6.84□□□□□ -1.31
SMCHD1-202ENST00000577300 SLC41A1Q8IVJ1 513 aa6.84□□□□□ -1.31
SMCHD1-202ENST00000577300 PROKR1Q8TCW9 393 aa6.84□□□□□ -1.31
SMCHD1-202ENST00000577300 MFSD3Q96ES6 412 aa6.84□□□□□ -1.31
SMCHD1-202ENST00000577300 MLST8Q9BVC4 326 aa6.84□□□□□ -1.31
SMCHD1-202ENST00000577300 KCNH6Q9H252 994 aa6.84□□□□□ -1.31
SMCHD1-202ENST00000577300 MS4A5Q9H3V2 200 aa6.84□□□□□ -1.31
SMCHD1-202ENST00000577300 PRSS50Q9UI38 385 aa6.84□□□□□ -1.31
SMCHD1-202ENST00000577300 CLCA2Q9UQC9 943 aa6.84□□□□□ -1.31
SMCHD1-202ENST00000577300 RHOBTB3O94955 611 aa6.83□□□□□ -1.32
SMCHD1-202ENST00000577300 SCAF4O95104 1147 aaKnown RBP6.83□□□□□ -1.32
SMCHD1-202ENST00000577300 GCP02774 474 aa6.83□□□□□ -1.32
SMCHD1-202ENST00000577300 IL2P60568 153 aa6.83□□□□□ -1.32
SMCHD1-202ENST00000577300 PPARAQ07869 468 aa6.83□□□□□ -1.32
SMCHD1-202ENST00000577300 PLEKHG4Q58EX7 1191 aa6.83□□□□□ -1.32
SMCHD1-202ENST00000577300 MBNL2Q5VZF2 373 aaKnown RBP6.83□□□□□ -1.32
SMCHD1-202ENST00000577300 GPRIN1Q7Z2K8 1008 aa6.83□□□□□ -1.32
SMCHD1-202ENST00000577300 C11orf74Q86VG3 221 aa6.83□□□□□ -1.32
SMCHD1-202ENST00000577300 LYSMD2Q8IV50 215 aa6.83□□□□□ -1.32
SMCHD1-202ENST00000577300 NDC1Q9BTX1 674 aa6.83□□□□□ -1.32
SMCHD1-202ENST00000577300 SLC46A2Q9BY10 475 aa6.83□□□□□ -1.32
SMCHD1-202ENST00000577300 KCNG1Q9UIX4 513 aa6.83□□□□□ -1.32
SMCHD1-202ENST00000577300 AHRRA9YTQ3 701 aa6.82□□□□□ -1.32
SMCHD1-202ENST00000577300 PPFIA2O75334 1257 aa6.82□□□□□ -1.32
SMCHD1-202ENST00000577300 LTA4HP09960 611 aaKnown RBP6.82□□□□□ -1.32
SMCHD1-202ENST00000577300 PROZP22891 400 aa6.82□□□□□ -1.32
SMCHD1-202ENST00000577300 ZFP36P26651 326 aaKnown RBP6.82□□□□□ -1.32
SMCHD1-202ENST00000577300 MEF2AQ02078 507 aaPredicted RBP6.82□□□□□ -1.32
SMCHD1-202ENST00000577300 FSTL1Q12841 308 aa6.82□□□□□ -1.32
SMCHD1-202ENST00000577300 UBE3CQ15386 1083 aa6.82□□□□□ -1.32
SMCHD1-202ENST00000577300 KCNV1Q6PIU1 500 aa6.82□□□□□ -1.32
SMCHD1-202ENST00000577300 KIAA0907Q7Z7F0 614 aaPredicted RBP6.82□□□□□ -1.32
SMCHD1-202ENST00000577300 FAM193BQ96PV7 902 aaPredicted RBP6.82□□□□□ -1.32
SMCHD1-202ENST00000577300 EMC7Q9NPA0 242 aa6.82□□□□□ -1.32
SMCHD1-202ENST00000577300 EVLQ9UI08 416 aaPredicted RBP6.82□□□□□ -1.32
SMCHD1-202ENST00000577300 EIF2B4Q9UI10 523 aaKnown RBP6.82□□□□□ -1.32
SMCHD1-202ENST00000577300 HDAC5Q9UQL6 1122 aa6.82□□□□□ -1.32
SMCHD1-202ENST00000577300 GSG1L2A8MUP6 293 aa6.81□□□□□ -1.32
SMCHD1-202ENST00000577300 KDM1AO60341 852 aa6.81□□□□□ -1.32
SMCHD1-202ENST00000577300 LAG3P18627 525 aa6.81□□□□□ -1.32
SMCHD1-202ENST00000577300 TIGD2Q4W5G0 525 aa6.81□□□□□ -1.32
SMCHD1-202ENST00000577300 C19orf54Q5BKX5 351 aa6.81□□□□□ -1.32
SMCHD1-202ENST00000577300 VRK3Q8IV63 474 aa6.81□□□□□ -1.32
SMCHD1-202ENST00000577300 OR14C36Q8NHC7 312 aa6.81□□□□□ -1.32
SMCHD1-202ENST00000577300 MYEOVQ96EZ4 313 aa6.81□□□□□ -1.32
SMCHD1-202ENST00000577300 CRAMP1Q96RY5 1269 aa6.81□□□□□ -1.32
SMCHD1-202ENST00000577300 DCLRE1CQ96SD1 692 aaKnown RBP6.81□□□□□ -1.32
SMCHD1-202ENST00000577300 ANO3Q9BYT9 981 aa6.81□□□□□ -1.32
SMCHD1-202ENST00000577300 ZNF768Q9H5H4 540 aaKnown RBP6.81□□□□□ -1.32
SMCHD1-202ENST00000577300 MRPL42Q9Y6G3 142 aaKnown RBP6.81□□□□□ -1.32
SMCHD1-202ENST00000577300 COL4A3Q01955 1670 aa6.81□□□□□ -1.32
SMCHD1-202ENST00000577300 GRID2IPA4D2P6 1211 aa6.8□□□□□ -1.32
SMCHD1-202ENST00000577300 RAB11FIP3O75154 756 aa6.8□□□□□ -1.32
SMCHD1-202ENST00000577300 HSP90B1P14625 803 aaKnown RBP6.8□□□□□ -1.32
SMCHD1-202ENST00000577300 ADRA1BP35368 520 aa6.8□□□□□ -1.32
SMCHD1-202ENST00000577300 TRIM25Q14258 630 aaKnown RBP6.8□□□□□ -1.32
SMCHD1-202ENST00000577300 DDB1Q16531 1140 aa6.8□□□□□ -1.32
SMCHD1-202ENST00000577300 BROXQ5VW32 411 aa6.8□□□□□ -1.32
SMCHD1-202ENST00000577300 DRICH1Q6PGQ1 229 aaPredicted RBP6.8□□□□□ -1.32
SMCHD1-202ENST00000577300 RASSF3Q86WH2 238 aa6.8□□□□□ -1.32
SMCHD1-202ENST00000577300 SLC5A5Q92911 643 aa6.8□□□□□ -1.32
SMCHD1-202ENST00000577300 PACSIN3Q9UKS6 424 aa6.8□□□□□ -1.32
SMCHD1-202ENST00000577300 PRR5-ARHGAP8B1AHC4 643 aa6.79□□□□□ -1.32
SMCHD1-202ENST00000577300 APOBEC3AP31941 199 aaPredicted RBP6.79□□□□□ -1.32
SMCHD1-202ENST00000577300 PTTG1IPP53801 180 aa6.79□□□□□ -1.32
SMCHD1-202ENST00000577300 APBA1Q02410 837 aa6.79□□□□□ -1.32
SMCHD1-202ENST00000577300 JAZF1Q86VZ6 243 aa6.79□□□□□ -1.32
SMCHD1-202ENST00000577300 LILRA3Q8N6C8 439 aaPredicted RBP6.79□□□□□ -1.32
SMCHD1-202ENST00000577300 SNX33Q8WV41 574 aa6.79□□□□□ -1.32
SMCHD1-202ENST00000577300 CDY2AQ9Y6F7 541 aa6.79□□□□□ -1.32
SMCHD1-202ENST00000577300 PCSK5Q92824 1860 aa6.79□□□□□ -1.32
SMCHD1-202ENST00000577300 A0A087X0B3 334 aa6.78□□□□□ -1.32
SMCHD1-202ENST00000577300 TMEM200CA6NKL6 621 aa6.78□□□□□ -1.32
SMCHD1-202ENST00000577300 DIRC3C9JPN6 131 aa6.78□□□□□ -1.32
SMCHD1-202ENST00000577300 B3GALT2O43825 422 aa6.78□□□□□ -1.32
SMCHD1-202ENST00000577300 TMEM127O75204 238 aa6.78□□□□□ -1.32
SMCHD1-202ENST00000577300 TAP1Q03518 808 aa6.78□□□□□ -1.32
SMCHD1-202ENST00000577300 PITRM1Q5JRX3 1037 aa6.78□□□□□ -1.32
SMCHD1-202ENST00000577300 CCDC62Q6P9F0 684 aa6.78□□□□□ -1.32
SMCHD1-202ENST00000577300 GDF7Q7Z4P5 450 aa6.78□□□□□ -1.32
SMCHD1-202ENST00000577300 XYLT1Q86Y38 959 aa6.78□□□□□ -1.32
SMCHD1-202ENST00000577300 PAWRQ96IZ0 340 aaKnown RBP6.78□□□□□ -1.32
SMCHD1-202ENST00000577300 CDC5LQ99459 802 aaKnown RBP6.78□□□□□ -1.32
SMCHD1-202ENST00000577300 PRDM12Q9H4Q4 367 aa6.78□□□□□ -1.32
SMCHD1-202ENST00000577300 TRPM5Q9NZQ8 1165 aa6.78□□□□□ -1.32
SMCHD1-202ENST00000577300 MAPRE3Q9UPY8 281 aa6.78□□□□□ -1.32
SMCHD1-202ENST00000577300 NOC2LQ9Y3T9 749 aaKnown RBP6.78□□□□□ -1.32
SMCHD1-202ENST00000577300 CHST2Q9Y4C5 530 aa6.78□□□□□ -1.32
SMCHD1-202ENST00000577300 CENPVL1A0A0U1RR11 272 aa6.77□□□□□ -1.33
SMCHD1-202ENST00000577300 GAGE12BA1L429 117 aa6.77□□□□□ -1.33
SMCHD1-202ENST00000577300 GAGE12HA6NDE8 117 aa6.77□□□□□ -1.33
SMCHD1-202ENST00000577300 B5MCH6 92 aa6.77□□□□□ -1.33
SMCHD1-202ENST00000577300 RNASET2O00584 256 aaKnown RBP6.77□□□□□ -1.33
SMCHD1-202ENST00000577300 PRAMEF4O60810 478 aa6.77□□□□□ -1.33
SMCHD1-202ENST00000577300 LMNAP02545 664 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms