RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 NRP1O14786 923 aa7.16□□□□□ -1.26
NUP88-213ENST00000576862 MYBL2P10244 700 aa7.16□□□□□ -1.26
NUP88-213ENST00000576862 RBP3P10745 1247 aa7.16□□□□□ -1.26
NUP88-213ENST00000576862 SLC5A3P53794 718 aa7.16□□□□□ -1.26
NUP88-213ENST00000576862 NPEPPSP55786 919 aa7.16□□□□□ -1.26
NUP88-213ENST00000576862 PCBP2Q15366 365 aaKnown RBP eCLIP7.16□□□□□ -1.26
NUP88-213ENST00000576862 MBNL2Q5VZF2 373 aaKnown RBP7.16□□□□□ -1.26
NUP88-213ENST00000576862 AMOTL1Q8IY63 956 aa7.16□□□□□ -1.26
NUP88-213ENST00000576862 D2HGDHQ8N465 521 aa7.16□□□□□ -1.26
NUP88-213ENST00000576862 RIN2Q8WYP3 895 aaPredicted RBP7.16□□□□□ -1.26
NUP88-213ENST00000576862 JADE3Q92613 823 aa7.16□□□□□ -1.26
NUP88-213ENST00000576862 FUBP3Q96I24 572 aaKnown RBP eCLIP7.16□□□□□ -1.26
NUP88-213ENST00000576862 MPHOSPH9Q99550 1183 aa7.16□□□□□ -1.26
NUP88-213ENST00000576862 DMRT3Q9NQL9 472 aa7.16□□□□□ -1.26
NUP88-213ENST00000576862 RPTORQ8N122 1335 aa7.16□□□□□ -1.26
NUP88-213ENST00000576862 DUSP2Q05923 314 aa7.15□□□□□ -1.26
NUP88-213ENST00000576862 MALLQ13021 153 aa7.15□□□□□ -1.26
NUP88-213ENST00000576862 MST1LQ2TV78 715 aa7.15□□□□□ -1.26
NUP88-213ENST00000576862 HS1BP3Q53T59 392 aa7.15□□□□□ -1.26
NUP88-213ENST00000576862 MUM1L1Q5H9M0 696 aa7.15□□□□□ -1.26
NUP88-213ENST00000576862 FKBP15Q5T1M5 1219 aa7.15□□□□□ -1.26
NUP88-213ENST00000576862 Q6ZVL8 140 aa7.15□□□□□ -1.26
NUP88-213ENST00000576862 GPR156Q8NFN8 814 aa7.15□□□□□ -1.26
NUP88-213ENST00000576862 OR5M3Q8NGP4 307 aa7.15□□□□□ -1.26
NUP88-213ENST00000576862 STAG1Q8WVM7 1258 aa7.15□□□□□ -1.26
NUP88-213ENST00000576862 HOXB13Q92826 284 aaPredicted RBP7.15□□□□□ -1.26
NUP88-213ENST00000576862 ZNF512Q96ME7 567 aaPredicted RBP7.15□□□□□ -1.26
NUP88-213ENST00000576862 ADOQ96SZ5 270 aa7.15□□□□□ -1.26
NUP88-213ENST00000576862 GREM2Q9H772 168 aa7.15□□□□□ -1.26
NUP88-213ENST00000576862 MKS1Q9NXB0 559 aa7.15□□□□□ -1.26
NUP88-213ENST00000576862 SHTN1A0MZ66 631 aa7.14□□□□□ -1.27
NUP88-213ENST00000576862 ITGA10O75578 1167 aa7.14□□□□□ -1.27
NUP88-213ENST00000576862 ADRB1P08588 477 aa7.14□□□□□ -1.27
NUP88-213ENST00000576862 GYPEP15421 78 aa7.14□□□□□ -1.27
NUP88-213ENST00000576862 MCAMP43121 646 aa7.14□□□□□ -1.27
NUP88-213ENST00000576862 MRPL49Q13405 166 aaKnown RBP7.14□□□□□ -1.27
NUP88-213ENST00000576862 CLUL1Q15846 466 aa7.14□□□□□ -1.27
NUP88-213ENST00000576862 FAM214AQ32MH5 1076 aa7.14□□□□□ -1.27
NUP88-213ENST00000576862 PALM2Q8IXS6 379 aa7.14□□□□□ -1.27
NUP88-213ENST00000576862 BORCS6Q96GS4 357 aa7.14□□□□□ -1.27
NUP88-213ENST00000576862 GPRC5DQ9NZD1 345 aa7.14□□□□□ -1.27
NUP88-213ENST00000576862 TRPS1Q9UHF7 1281 aa7.14□□□□□ -1.27
NUP88-213ENST00000576862 TSC22D4Q9Y3Q8 395 aa7.14□□□□□ -1.27
NUP88-213ENST00000576862 MUSKO15146 869 aa7.13□□□□□ -1.27
NUP88-213ENST00000576862 HOXA3O43365 443 aaPredicted RBP7.13□□□□□ -1.27
NUP88-213ENST00000576862 AKR1B10O60218 316 aa7.13□□□□□ -1.27
NUP88-213ENST00000576862 NCLP19338 710 aaKnown RBP7.13□□□□□ -1.27
NUP88-213ENST00000576862 ADSLP30566 484 aaPredicted RBP7.13□□□□□ -1.27
NUP88-213ENST00000576862 KRT85P78386 507 aa7.13□□□□□ -1.27
NUP88-213ENST00000576862 ELAVL1Q15717 326 aaKnown RBP7.13□□□□□ -1.27
NUP88-213ENST00000576862 ZNF480Q8WV37 535 aa7.13□□□□□ -1.27
NUP88-213ENST00000576862 SSH1Q8WYL5 1049 aa7.13□□□□□ -1.27
NUP88-213ENST00000576862 ARL8AQ96BM9 186 aa7.13□□□□□ -1.27
NUP88-213ENST00000576862 FAM89AQ96GI7 184 aa7.13□□□□□ -1.27
NUP88-213ENST00000576862 SMAD5Q99717 465 aaKnown RBP7.13□□□□□ -1.27
NUP88-213ENST00000576862 RBM12Q9NTZ6 932 aaKnown RBP7.13□□□□□ -1.27
NUP88-213ENST00000576862 TUBD1Q9UJT1 453 aa7.13□□□□□ -1.27
NUP88-213ENST00000576862 TESMINQ9Y4I5 508 aa7.13□□□□□ -1.27
NUP88-213ENST00000576862 ZMYM3Q14202 1370 aa7.12□□□□□ -1.27
NUP88-213ENST00000576862 CAPN14A8MX76 684 aa7.12□□□□□ -1.27
NUP88-213ENST00000576862 C1QTNF3-AMACRE9PGA6 284 aa7.12□□□□□ -1.27
NUP88-213ENST00000576862 ADCY6O43306 1168 aa7.12□□□□□ -1.27
NUP88-213ENST00000576862 PHF2O75151 1096 aa7.12□□□□□ -1.27
NUP88-213ENST00000576862 C5AR1P21730 350 aa7.12□□□□□ -1.27
NUP88-213ENST00000576862 GZMKP49863 264 aa7.12□□□□□ -1.27
NUP88-213ENST00000576862 ANAPC15P60006 121 aa7.12□□□□□ -1.27
NUP88-213ENST00000576862 IGBP1P78318 339 aa7.12□□□□□ -1.27
NUP88-213ENST00000576862 PRKD1Q15139 912 aaPredicted RBP7.12□□□□□ -1.27
NUP88-213ENST00000576862 PTPN21Q16825 1174 aa7.12□□□□□ -1.27
NUP88-213ENST00000576862 SGMS1Q86VZ5 419 aa7.12□□□□□ -1.27
NUP88-213ENST00000576862 ELOA2Q8IYF1 753 aaPredicted RBP7.12□□□□□ -1.27
NUP88-213ENST00000576862 IL17RAQ96F46 866 aa7.12□□□□□ -1.27
NUP88-213ENST00000576862 SLC13A1Q9BZW2 595 aa7.12□□□□□ -1.27
NUP88-213ENST00000576862 KLHL33A6NCF5 533 aa7.11□□□□□ -1.27
NUP88-213ENST00000576862 WNT10BO00744 389 aa7.11□□□□□ -1.27
NUP88-213ENST00000576862 PLSCR1O15162 318 aa7.11□□□□□ -1.27
NUP88-213ENST00000576862 GASTP01350 101 aa7.11□□□□□ -1.27
NUP88-213ENST00000576862 GSPT1P15170 499 aaKnown RBP7.11□□□□□ -1.27
NUP88-213ENST00000576862 HIBADHP31937 336 aaKnown RBP7.11□□□□□ -1.27
NUP88-213ENST00000576862 CRHR1P34998 444 aa7.11□□□□□ -1.27
NUP88-213ENST00000576862 EXOSC10Q01780 885 aaKnown RBP7.11□□□□□ -1.27
NUP88-213ENST00000576862 HHEXQ03014 270 aa7.11□□□□□ -1.27
NUP88-213ENST00000576862 ODF1Q14990 250 aa7.11□□□□□ -1.27
NUP88-213ENST00000576862 SEPT2Q15019 361 aa7.11□□□□□ -1.27
NUP88-213ENST00000576862 ACAP2Q15057 778 aa7.11□□□□□ -1.27
NUP88-213ENST00000576862 SPDYAQ5MJ70 313 aa7.11□□□□□ -1.27
NUP88-213ENST00000576862 PRAMEF14Q5SWL7 426 aa7.11□□□□□ -1.27
NUP88-213ENST00000576862 C1QL3Q5VWW1 255 aa7.11□□□□□ -1.27
NUP88-213ENST00000576862 MFSD5Q6N075 450 aa7.11□□□□□ -1.27
NUP88-213ENST00000576862 PPM1NQ8N819 430 aa7.11□□□□□ -1.27
NUP88-213ENST00000576862 OR2I1PQ8NGU4 316 aa7.11□□□□□ -1.27
NUP88-213ENST00000576862 MDM1Q8TC05 714 aa7.11□□□□□ -1.27
NUP88-213ENST00000576862 MIEF2Q96C03 454 aa7.11□□□□□ -1.27
NUP88-213ENST00000576862 CDK5RAP1Q96SZ6 601 aaKnown RBP7.11□□□□□ -1.27
NUP88-213ENST00000576862 ADI1Q9BV57 179 aa7.11□□□□□ -1.27
NUP88-213ENST00000576862 DDX56Q9NY93 547 aaKnown RBP7.11□□□□□ -1.27
NUP88-213ENST00000576862 NDUFS2O75306 463 aa7.1□□□□□ -1.27
NUP88-213ENST00000576862 MGAT2Q10469 447 aa7.1□□□□□ -1.27
NUP88-213ENST00000576862 TRMT2AQ8IZ69 625 aaKnown RBP7.1□□□□□ -1.27
NUP88-213ENST00000576862 ANKRD35Q8N283 1001 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms