RNA–Protein interactions for RNA: ENST00000576036.5

LITAF-218, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LITAF, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-218ENST00000576036 TWF2Q6IBS0 349 aaKnown RBP17.21■□□□□ 0.35
LITAF-218ENST00000576036 KANK3Q6NY19 840 aa17.21■□□□□ 0.35
LITAF-218ENST00000576036 NOTUMQ6P988 496 aa17.21■□□□□ 0.35
LITAF-218ENST00000576036 SLC24A5Q71RS6 500 aa17.21■□□□□ 0.35
LITAF-218ENST00000576036 MAP4K3Q8IVH8 894 aa17.21■□□□□ 0.35
LITAF-218ENST00000576036 HERC6Q8IVU3 1022 aa17.21■□□□□ 0.35
LITAF-218ENST00000576036 MYOCDQ8IZQ8 938 aa17.21■□□□□ 0.35
LITAF-218ENST00000576036 KIAA0895Q8NCT3 520 aa17.21■□□□□ 0.35
LITAF-218ENST00000576036 SMG8Q8ND04 991 aaKnown RBP17.21■□□□□ 0.35
LITAF-218ENST00000576036 ZBTB45Q96K62 511 aaPredicted RBP17.21■□□□□ 0.35
LITAF-218ENST00000576036 SLC9A7Q96T83 725 aa17.21■□□□□ 0.35
LITAF-218ENST00000576036 FAM105AQ9NUU6 356 aa17.21■□□□□ 0.35
LITAF-218ENST00000576036 KCNG1Q9UIX4 513 aa17.21■□□□□ 0.35
LITAF-218ENST00000576036 H0YCG3 227 aa17.2■□□□□ 0.34
LITAF-218ENST00000576036 KINO60870 393 aaKnown RBP17.2■□□□□ 0.34
LITAF-218ENST00000576036 RHOBTB3O94955 611 aa17.2■□□□□ 0.34
LITAF-218ENST00000576036 AMHP03971 560 aa17.2■□□□□ 0.34
LITAF-218ENST00000576036 ZSCAN20P17040 1043 aaPredicted RBP17.2■□□□□ 0.34
LITAF-218ENST00000576036 GATMP50440 423 aa17.2■□□□□ 0.34
LITAF-218ENST00000576036 RABGGTBP53611 331 aa17.2■□□□□ 0.34
LITAF-218ENST00000576036 STK4Q13043 487 aa17.2■□□□□ 0.34
LITAF-218ENST00000576036 L1TD1Q5T7N2 865 aaKnown RBP17.2■□□□□ 0.34
LITAF-218ENST00000576036 ATF7IP2Q5U623 682 aa17.2■□□□□ 0.34
LITAF-218ENST00000576036 NPAS4Q8IUM7 802 aa17.2■□□□□ 0.34
LITAF-218ENST00000576036 PHOSPHO2Q8TCD6 241 aa17.2■□□□□ 0.34
LITAF-218ENST00000576036 HVCN1Q96D96 273 aa17.2■□□□□ 0.34
LITAF-218ENST00000576036 CCDC51Q96ER9 411 aa17.2■□□□□ 0.34
LITAF-218ENST00000576036 MRPL4Q9BYD3 311 aaKnown RBP17.2■□□□□ 0.34
LITAF-218ENST00000576036 MTIF3Q9H2K0 278 aaKnown RBP17.2■□□□□ 0.34
LITAF-218ENST00000576036 TNFSF13BQ9Y275 285 aa17.2■□□□□ 0.34
LITAF-218ENST00000576036 PCDHA5Q9Y5H7 936 aa17.2■□□□□ 0.34
LITAF-218ENST00000576036 ANKRD63C9JTQ0 380 aa17.19■□□□□ 0.34
LITAF-218ENST00000576036 SOX1O00570 391 aaPredicted RBP17.19■□□□□ 0.34
LITAF-218ENST00000576036 N4BP3O15049 544 aa17.19■□□□□ 0.34
LITAF-218ENST00000576036 ZNF623O75123 536 aa17.19■□□□□ 0.34
LITAF-218ENST00000576036 PRPF6O94906 941 aaKnown RBP17.19■□□□□ 0.34
LITAF-218ENST00000576036 ARHGEF15O94989 841 aa17.19■□□□□ 0.34
LITAF-218ENST00000576036 GJB5O95377 273 aa17.19■□□□□ 0.34
LITAF-218ENST00000576036 GCNT3O95395 438 aa17.19■□□□□ 0.34
LITAF-218ENST00000576036 NPTXRO95502 500 aa17.19■□□□□ 0.34
LITAF-218ENST00000576036 PBX2P40425 430 aa17.19■□□□□ 0.34
LITAF-218ENST00000576036 HTRA4P83105 476 aaPredicted RBP17.19■□□□□ 0.34
LITAF-218ENST00000576036 KCNB1Q14721 858 aa17.19■□□□□ 0.34
LITAF-218ENST00000576036 LRIT3Q3SXY7 679 aa17.19■□□□□ 0.34
LITAF-218ENST00000576036 FAM117BQ6P1L5 589 aa17.19■□□□□ 0.34
LITAF-218ENST00000576036 SLC27A1Q6PCB7 646 aa17.19■□□□□ 0.34
LITAF-218ENST00000576036 ZPBP2Q6X784 338 aa17.19■□□□□ 0.34
LITAF-218ENST00000576036 MRPL10Q7Z7H8 261 aaKnown RBP17.19■□□□□ 0.34
LITAF-218ENST00000576036 SLC17A8Q8NDX2 589 aa17.19■□□□□ 0.34
LITAF-218ENST00000576036 SCFD1Q8WVM8 642 aa17.19■□□□□ 0.34
LITAF-218ENST00000576036 LPPQ93052 612 aa17.19■□□□□ 0.34
LITAF-218ENST00000576036 CDT1Q9H211 546 aa17.19■□□□□ 0.34
LITAF-218ENST00000576036 RNF39Q9H2S5 420 aa17.19■□□□□ 0.34
LITAF-218ENST00000576036 NXF3Q9H4D5 531 aaKnown RBP17.19■□□□□ 0.34
LITAF-218ENST00000576036 SLC39A2Q9NP94 309 aa17.19■□□□□ 0.34
LITAF-218ENST00000576036 TMEM161AQ9NX61 479 aa17.19■□□□□ 0.34
LITAF-218ENST00000576036 GDAQ9Y2T3 454 aa17.19■□□□□ 0.34
LITAF-218ENST00000576036 YBX2Q9Y2T7 364 aaKnown RBP17.19■□□□□ 0.34
LITAF-218ENST00000576036 HES2Q9Y543 173 aa17.19■□□□□ 0.34
LITAF-218ENST00000576036 PCDHB2Q9Y5E7 798 aa17.19■□□□□ 0.34
LITAF-218ENST00000576036 ATG2AQ2TAZ0 1938 aa17.18■□□□□ 0.34
LITAF-218ENST00000576036 MEFVO15553 781 aaPredicted RBP17.18■□□□□ 0.34
LITAF-218ENST00000576036 UPP2O95045 317 aa17.18■□□□□ 0.34
LITAF-218ENST00000576036 FGFR1P11362 822 aa17.18■□□□□ 0.34
LITAF-218ENST00000576036 MYOGP15173 224 aa17.18■□□□□ 0.34
LITAF-218ENST00000576036 IBSPP21815 317 aaPredicted RBP17.18■□□□□ 0.34
LITAF-218ENST00000576036 SCP2P22307 547 aa17.18■□□□□ 0.34
LITAF-218ENST00000576036 BMT2Q1RMZ1 405 aa17.18■□□□□ 0.34
LITAF-218ENST00000576036 CLLU1OSQ5K130 101 aa17.18■□□□□ 0.34
LITAF-218ENST00000576036 AGMOQ6ZNB7 445 aa17.18■□□□□ 0.34
LITAF-218ENST00000576036 CEP120Q8N960 986 aa17.18■□□□□ 0.34
LITAF-218ENST00000576036 ZNF507Q8TCN5 953 aa17.18■□□□□ 0.34
LITAF-218ENST00000576036 ZNF689Q96CS4 500 aaPredicted RBP17.18■□□□□ 0.34
LITAF-218ENST00000576036 CLSTN2Q9H4D0 955 aa17.18■□□□□ 0.34
LITAF-218ENST00000576036 ELAC1Q9H777 363 aaKnown RBP17.18■□□□□ 0.34
LITAF-218ENST00000576036 EXOC1Q9NV70 894 aa17.18■□□□□ 0.34
LITAF-218ENST00000576036 IPPQ9Y573 584 aa17.18■□□□□ 0.34
LITAF-218ENST00000576036 LCHNA4D1U4 455 aa17.17■□□□□ 0.34
LITAF-218ENST00000576036 EIF3DO15371 548 aaKnown RBP eCLIP17.17■□□□□ 0.34
LITAF-218ENST00000576036 FAM189A1O60320 539 aa17.17■□□□□ 0.34
LITAF-218ENST00000576036 DGKIO75912 1065 aa17.17■□□□□ 0.34
LITAF-218ENST00000576036 ADSSP30520 456 aa17.17■□□□□ 0.34
LITAF-218ENST00000576036 RAB27AP51159 221 aa17.17■□□□□ 0.34
LITAF-218ENST00000576036 STRN3Q13033 797 aa17.17■□□□□ 0.34
LITAF-218ENST00000576036 ALCAMQ13740 583 aa17.17■□□□□ 0.34
LITAF-218ENST00000576036 MPZL3Q6UWV2 235 aa17.17■□□□□ 0.34
LITAF-218ENST00000576036 SP7Q8TDD2 431 aaPredicted RBP17.17■□□□□ 0.34
LITAF-218ENST00000576036 PBX4Q9BYU1 374 aa17.17■□□□□ 0.34
LITAF-218ENST00000576036 CXCL16Q9H2A7 254 aa17.17■□□□□ 0.34
LITAF-218ENST00000576036 STYXL1Q9Y6J8 313 aa17.17■□□□□ 0.34
LITAF-218ENST00000576036 COL4A4P53420 1690 aaPredicted RBP17.16■□□□□ 0.34
LITAF-218ENST00000576036 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.16■□□□□ 0.34
LITAF-218ENST00000576036 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.16■□□□□ 0.34
LITAF-218ENST00000576036 TGFB1I1O43294 461 aa17.16■□□□□ 0.34
LITAF-218ENST00000576036 TOM1L1O75674 476 aa17.16■□□□□ 0.34
LITAF-218ENST00000576036 LINC00271P0C7V0 271 aa17.16■□□□□ 0.34
LITAF-218ENST00000576036 BMP6P22004 513 aa17.16■□□□□ 0.34
LITAF-218ENST00000576036 AFF1P51825 1210 aaKnown RBP17.16■□□□□ 0.34
LITAF-218ENST00000576036 MCL1Q07820 350 aa17.16■□□□□ 0.34
LITAF-218ENST00000576036 CAMK4Q16566 473 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms