RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 CA3P07451 260 aa10.5□□□□□ -0.73
CCDC40-214ENST00000575431 ITGA4P13612 1032 aa10.5□□□□□ -0.73
CCDC40-214ENST00000575431 PBX2P40425 430 aa10.5□□□□□ -0.73
CCDC40-214ENST00000575431 ASIC1P78348 528 aa10.5□□□□□ -0.73
CCDC40-214ENST00000575431 FAM160A1Q05DH4 1040 aa10.5□□□□□ -0.73
CCDC40-214ENST00000575431 BTG3Q14201 252 aaPredicted RBP10.5□□□□□ -0.73
CCDC40-214ENST00000575431 DCAF4L1Q3SXM0 396 aa10.5□□□□□ -0.73
CCDC40-214ENST00000575431 UBXN11Q5T124 520 aa10.5□□□□□ -0.73
CCDC40-214ENST00000575431 ATF7IP2Q5U623 682 aa10.5□□□□□ -0.73
CCDC40-214ENST00000575431 PPP2R2DQ66LE6 453 aa10.5□□□□□ -0.73
CCDC40-214ENST00000575431 GLB1LQ6UWU2 654 aa10.5□□□□□ -0.73
CCDC40-214ENST00000575431 KRBA2Q6ZNG9 492 aa10.5□□□□□ -0.73
CCDC40-214ENST00000575431 SFR1Q86XK3 245 aa10.5□□□□□ -0.73
CCDC40-214ENST00000575431 ELOA2Q8IYF1 753 aaPredicted RBP10.5□□□□□ -0.73
CCDC40-214ENST00000575431 FIBCD1Q8N539 461 aa10.5□□□□□ -0.73
CCDC40-214ENST00000575431 STAMQ92783 540 aa10.5□□□□□ -0.73
CCDC40-214ENST00000575431 PAGE5Q96GU1 130 aa10.5□□□□□ -0.73
CCDC40-214ENST00000575431 CPB2Q96IY4 423 aa10.5□□□□□ -0.73
CCDC40-214ENST00000575431 TCHPQ9BT92 498 aa10.5□□□□□ -0.73
CCDC40-214ENST00000575431 MRPL9Q9BYD2 267 aaKnown RBP10.5□□□□□ -0.73
CCDC40-214ENST00000575431 NKX2-4Q9H2Z4 354 aa10.5□□□□□ -0.73
CCDC40-214ENST00000575431 TMEM206Q9H813 350 aa10.5□□□□□ -0.73
CCDC40-214ENST00000575431 RC3H2Q9HBD1 1191 aaKnown RBP10.5□□□□□ -0.73
CCDC40-214ENST00000575431 AAASQ9NRG9 546 aa10.5□□□□□ -0.73
CCDC40-214ENST00000575431 KANSL3Q9P2N6 904 aa10.5□□□□□ -0.73
CCDC40-214ENST00000575431 TBX20Q9UMR3 447 aa10.5□□□□□ -0.73
CCDC40-214ENST00000575431 GBF1Q92538 1859 aa10.5□□□□□ -0.73
CCDC40-214ENST00000575431 DNAH12Q6ZR08 3092 aa10.49□□□□□ -0.73
CCDC40-214ENST00000575431 LINC01553A4QN01 128 aa10.49□□□□□ -0.73
CCDC40-214ENST00000575431 PIGRP01833 764 aa10.49□□□□□ -0.73
CCDC40-214ENST00000575431 RB1P06400 928 aa10.49□□□□□ -0.73
CCDC40-214ENST00000575431 MCF2P10911 925 aa10.49□□□□□ -0.73
CCDC40-214ENST00000575431 AFMP43652 599 aa10.49□□□□□ -0.73
CCDC40-214ENST00000575431 LIG4P49917 911 aa10.49□□□□□ -0.73
CCDC40-214ENST00000575431 UBE2HP62256 183 aa10.49□□□□□ -0.73
CCDC40-214ENST00000575431 PSMD2Q13200 908 aa10.49□□□□□ -0.73
CCDC40-214ENST00000575431 KYAT1Q16773 422 aa10.49□□□□□ -0.73
CCDC40-214ENST00000575431 NT5DC1Q5TFE4 455 aa10.49□□□□□ -0.73
CCDC40-214ENST00000575431 SLFN12LQ6IEE8 588 aa10.49□□□□□ -0.73
CCDC40-214ENST00000575431 TMCO2Q7Z6W1 182 aaPredicted RBP10.49□□□□□ -0.73
CCDC40-214ENST00000575431 FMR1NBQ8N0W7 255 aaPredicted RBP10.49□□□□□ -0.73
CCDC40-214ENST00000575431 LRRC43Q8N309 656 aa10.49□□□□□ -0.73
CCDC40-214ENST00000575431 RNF169Q8NCN4 708 aa10.49□□□□□ -0.73
CCDC40-214ENST00000575431 LRCH3Q96II8 777 aa10.49□□□□□ -0.73
CCDC40-214ENST00000575431 TGS1Q96RS0 853 aaKnown RBP10.49□□□□□ -0.73
CCDC40-214ENST00000575431 FIZ1Q96SL8 496 aa10.49□□□□□ -0.73
CCDC40-214ENST00000575431 ACO2Q99798 780 aaKnown RBP10.49□□□□□ -0.73
CCDC40-214ENST00000575431 TARS2Q9BW92 718 aaKnown RBP10.49□□□□□ -0.73
CCDC40-214ENST00000575431 PDZD7Q9H5P4 517 aa10.49□□□□□ -0.73
CCDC40-214ENST00000575431 ZNF576Q9H609 170 aa10.49□□□□□ -0.73
CCDC40-214ENST00000575431 RSAD1Q9HA92 442 aa10.49□□□□□ -0.73
CCDC40-214ENST00000575431 PTPRHQ9HD43 1115 aa10.49□□□□□ -0.73
CCDC40-214ENST00000575431 YBX2Q9Y2T7 364 aaKnown RBP10.49□□□□□ -0.73
CCDC40-214ENST00000575431 GIT1Q9Y2X7 761 aa10.49□□□□□ -0.73
CCDC40-214ENST00000575431 IPPQ9Y573 584 aa10.49□□□□□ -0.73
CCDC40-214ENST00000575431 GOLGA6L22H0YM25 854 aa10.48□□□□□ -0.73
CCDC40-214ENST00000575431 HNRNPDLO14979 420 aaKnown RBP10.48□□□□□ -0.73
CCDC40-214ENST00000575431 INPPL1O15357 1258 aa10.48□□□□□ -0.73
CCDC40-214ENST00000575431 EIF3DO15371 548 aaKnown RBP eCLIP10.48□□□□□ -0.73
CCDC40-214ENST00000575431 CLDN3O15551 220 aa10.48□□□□□ -0.73
CCDC40-214ENST00000575431 KINO60870 393 aaKnown RBP10.48□□□□□ -0.73
CCDC40-214ENST00000575431 PPP1R37O75864 691 aa10.48□□□□□ -0.73
CCDC40-214ENST00000575431 KIF20AO95235 890 aa10.48□□□□□ -0.73
CCDC40-214ENST00000575431 GCNT3O95395 438 aa10.48□□□□□ -0.73
CCDC40-214ENST00000575431 NPTXRO95502 500 aa10.48□□□□□ -0.73
CCDC40-214ENST00000575431 MYOGP15173 224 aa10.48□□□□□ -0.73
CCDC40-214ENST00000575431 ATF7P17544 494 aaPredicted RBP10.48□□□□□ -0.73
CCDC40-214ENST00000575431 PROZP22891 400 aa10.48□□□□□ -0.73
CCDC40-214ENST00000575431 NMT1P30419 496 aaKnown RBP10.48□□□□□ -0.73
CCDC40-214ENST00000575431 ERVK-21P61565 698 aa10.48□□□□□ -0.73
CCDC40-214ENST00000575431 SNRPFP62306 86 aaKnown RBP10.48□□□□□ -0.73
CCDC40-214ENST00000575431 TAP1Q03518 808 aa10.48□□□□□ -0.73
CCDC40-214ENST00000575431 COASYQ13057 564 aa10.48□□□□□ -0.73
CCDC40-214ENST00000575431 POSTNQ15063 836 aa10.48□□□□□ -0.73
CCDC40-214ENST00000575431 ZNF568Q3ZCX4 644 aa10.48□□□□□ -0.73
CCDC40-214ENST00000575431 FAM26FQ5R3K3 315 aa10.48□□□□□ -0.73
CCDC40-214ENST00000575431 MPZL3Q6UWV2 235 aa10.48□□□□□ -0.73
CCDC40-214ENST00000575431 TAS1R3Q7RTX0 852 aa10.48□□□□□ -0.73
CCDC40-214ENST00000575431 MAP4K3Q8IVH8 894 aa10.48□□□□□ -0.73
CCDC40-214ENST00000575431 SMG8Q8ND04 991 aaKnown RBP10.48□□□□□ -0.73
CCDC40-214ENST00000575431 ENGASEQ8NFI3 743 aa10.48□□□□□ -0.73
CCDC40-214ENST00000575431 URGCPQ8TCY9 931 aa10.48□□□□□ -0.73
CCDC40-214ENST00000575431 BICD1Q96G01 975 aa10.48□□□□□ -0.73
CCDC40-214ENST00000575431 ACCSQ96QU6 501 aa10.48□□□□□ -0.73
CCDC40-214ENST00000575431 CCDC94Q9BW85 323 aaPredicted RBP10.48□□□□□ -0.73
CCDC40-214ENST00000575431 STRA6Q9BX79 667 aa10.48□□□□□ -0.73
CCDC40-214ENST00000575431 EIF2AQ9BY44 585 aaKnown RBP10.48□□□□□ -0.73
CCDC40-214ENST00000575431 GTPBP4Q9BZE4 634 aaKnown RBP10.48□□□□□ -0.73
CCDC40-214ENST00000575431 BLZF1Q9H2G9 400 aa10.48□□□□□ -0.73
CCDC40-214ENST00000575431 GOLPH3LQ9H4A5 285 aa10.48□□□□□ -0.73
CCDC40-214ENST00000575431 TOPORSQ9NS56 1045 aaPredicted RBP10.48□□□□□ -0.73
CCDC40-214ENST00000575431 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.48□□□□□ -0.73
CCDC40-214ENST00000575431 RALGAPA2Q2PPJ7 1873 aa10.47□□□□□ -0.73
CCDC40-214ENST00000575431 LCHNA4D1U4 455 aa10.47□□□□□ -0.73
CCDC40-214ENST00000575431 TTLL13PA6NNM8 815 aa10.47□□□□□ -0.73
CCDC40-214ENST00000575431 TBKBP1A7MCY6 615 aa10.47□□□□□ -0.73
CCDC40-214ENST00000575431 KIAA0391O15091 583 aaKnown RBP10.47□□□□□ -0.73
CCDC40-214ENST00000575431 PRPF40AO75400 957 aaKnown RBP10.47□□□□□ -0.73
CCDC40-214ENST00000575431 OFD1O75665 1012 aa10.47□□□□□ -0.73
CCDC40-214ENST00000575431 FGFR1P11362 822 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms