RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 SGPL1O95470 568 aa25.6■■□□□ 1.69
NPLOC4-217ENST00000574897 RFX1P22670 979 aa25.6■■□□□ 1.69
NPLOC4-217ENST00000574897 EMC2Q15006 297 aa25.6■■□□□ 1.69
NPLOC4-217ENST00000574897 XKR3Q5GH77 459 aa25.6■■□□□ 1.69
NPLOC4-217ENST00000574897 SLFN11Q7Z7L1 901 aa25.6■■□□□ 1.69
NPLOC4-217ENST00000574897 SULF1Q8IWU6 871 aa25.6■■□□□ 1.69
NPLOC4-217ENST00000574897 METTL13Q8N6R0 699 aa25.6■■□□□ 1.69
NPLOC4-217ENST00000574897 DNERQ8NFT8 737 aa25.6■■□□□ 1.69
NPLOC4-217ENST00000574897 TAS1R2Q8TE23 839 aa25.6■■□□□ 1.69
NPLOC4-217ENST00000574897 BICD1Q96G01 975 aa25.6■■□□□ 1.69
NPLOC4-217ENST00000574897 KRT12Q99456 494 aa25.6■■□□□ 1.69
NPLOC4-217ENST00000574897 ZNF302Q9NR11 478 aa25.6■■□□□ 1.69
NPLOC4-217ENST00000574897 STIM2Q9P246 746 aa25.6■■□□□ 1.69
NPLOC4-217ENST00000574897 RNF14Q9UBS8 474 aa25.6■■□□□ 1.69
NPLOC4-217ENST00000574897 STXBP5LQ9Y2K9 1186 aa25.6■■□□□ 1.69
NPLOC4-217ENST00000574897 LRRC37A2A6NM11 1700 aa25.59■■□□□ 1.69
NPLOC4-217ENST00000574897 BUB1BO60566 1050 aaPredicted RBP25.59■■□□□ 1.69
NPLOC4-217ENST00000574897 DLATP10515 647 aaKnown RBP25.59■■□□□ 1.69
NPLOC4-217ENST00000574897 UBA1P22314 1058 aaKnown RBP25.59■■□□□ 1.69
NPLOC4-217ENST00000574897 C17orf75Q9HAS0 396 aa25.59■■□□□ 1.69
NPLOC4-217ENST00000574897 NCANO14594 1321 aa25.59■■□□□ 1.69
NPLOC4-217ENST00000574897 CEP104O60308 925 aa25.59■■□□□ 1.69
NPLOC4-217ENST00000574897 GLI1P08151 1106 aa25.59■■□□□ 1.69
NPLOC4-217ENST00000574897 TMEM253P0C7T8 217 aa25.59■■□□□ 1.69
NPLOC4-217ENST00000574897 CCDC172P0C7W6 258 aa25.59■■□□□ 1.69
NPLOC4-217ENST00000574897 POLGP54098 1239 aaPredicted RBP25.59■■□□□ 1.69
NPLOC4-217ENST00000574897 TAF3Q5VWG9 929 aa25.59■■□□□ 1.69
NPLOC4-217ENST00000574897 ZNF771Q7L3S4 317 aaPredicted RBP25.59■■□□□ 1.69
NPLOC4-217ENST00000574897 NT5DC3Q86UY8 548 aa25.59■■□□□ 1.69
NPLOC4-217ENST00000574897 USP38Q8NB14 1042 aa25.59■■□□□ 1.69
NPLOC4-217ENST00000574897 AENQ8WTP8 325 aaKnown RBP25.59■■□□□ 1.69
NPLOC4-217ENST00000574897 CTNNBL1Q8WYA6 563 aaPredicted RBP25.59■■□□□ 1.69
NPLOC4-217ENST00000574897 FAM213AQ9BRX8 229 aa25.59■■□□□ 1.69
NPLOC4-217ENST00000574897 SPATC1LQ9H0A9 340 aa25.59■■□□□ 1.69
NPLOC4-217ENST00000574897 ARHGAP28Q9P2N2 729 aa25.59■■□□□ 1.69
NPLOC4-217ENST00000574897 HPCAL4Q9UM19 191 aa25.59■■□□□ 1.69
NPLOC4-217ENST00000574897 ICAM3P32942 547 aa25.58■■□□□ 1.69
NPLOC4-217ENST00000574897 CYP24A1Q07973 514 aa25.58■■□□□ 1.69
NPLOC4-217ENST00000574897 RIOX2Q8IUF8 465 aa25.58■■□□□ 1.69
NPLOC4-217ENST00000574897 RPUSD2Q8IZ73 545 aaKnown RBP25.58■■□□□ 1.69
NPLOC4-217ENST00000574897 ASAP3Q8TDY4 903 aa25.58■■□□□ 1.69
NPLOC4-217ENST00000574897 RFFLQ8WZ73 363 aa25.58■■□□□ 1.69
NPLOC4-217ENST00000574897 CCDC102AQ96A19 550 aa25.58■■□□□ 1.69
NPLOC4-217ENST00000574897 FBXL18Q96ME1 805 aa25.58■■□□□ 1.69
NPLOC4-217ENST00000574897 FHDC1Q9C0D6 1143 aaPredicted RBP25.58■■□□□ 1.69
NPLOC4-217ENST00000574897 CHORDC1Q9UHD1 332 aaPredicted RBP25.58■■□□□ 1.69
NPLOC4-217ENST00000574897 COG5Q9UP83 839 aa25.58■■□□□ 1.69
NPLOC4-217ENST00000574897 MAFBQ9Y5Q3 323 aaPredicted RBP25.58■■□□□ 1.69
NPLOC4-217ENST00000574897 ZC3H4Q9UPT8 1303 aaKnown RBP25.58■■□□□ 1.68
NPLOC4-217ENST00000574897 ESYT3A0FGR9 886 aa25.58■■□□□ 1.68
NPLOC4-217ENST00000574897 PHACTR2O75167 634 aa25.58■■□□□ 1.68
NPLOC4-217ENST00000574897 LMBRD2Q68DH5 695 aaPredicted RBP25.58■■□□□ 1.68
NPLOC4-217ENST00000574897 KRT39Q6A163 491 aa25.58■■□□□ 1.68
NPLOC4-217ENST00000574897 IFT74Q96LB3 600 aa25.58■■□□□ 1.68
NPLOC4-217ENST00000574897 MFSD14AQ96MC6 490 aa25.58■■□□□ 1.68
NPLOC4-217ENST00000574897 CYP26A1O43174 497 aa25.57■■□□□ 1.68
NPLOC4-217ENST00000574897 ATG7O95352 703 aa25.57■■□□□ 1.68
NPLOC4-217ENST00000574897 OATP04181 439 aa25.57■■□□□ 1.68
NPLOC4-217ENST00000574897 WNT7BP56706 349 aa25.57■■□□□ 1.68
NPLOC4-217ENST00000574897 NOP9Q86U38 636 aaKnown RBP25.57■■□□□ 1.68
NPLOC4-217ENST00000574897 KLHL7Q8IXQ5 586 aa25.57■■□□□ 1.68
NPLOC4-217ENST00000574897 PROCA1Q8NCQ7 364 aaPredicted RBP25.57■■□□□ 1.68
NPLOC4-217ENST00000574897 PCDHB18PQ96TA0 734 aa25.57■■□□□ 1.68
NPLOC4-217ENST00000574897 PCYT2Q99447 389 aa25.57■■□□□ 1.68
NPLOC4-217ENST00000574897 SIP14410 1827 aa25.57■■□□□ 1.68
NPLOC4-217ENST00000574897 SLC47A2Q86VL8 602 aa25.56■■□□□ 1.68
NPLOC4-217ENST00000574897 GPD1LQ8N335 351 aa25.56■■□□□ 1.68
NPLOC4-217ENST00000574897 DHX38Q92620 1227 aaKnown RBP25.56■■□□□ 1.68
NPLOC4-217ENST00000574897 PI4K2AQ9BTU6 479 aa25.56■■□□□ 1.68
NPLOC4-217ENST00000574897 TMEM8AQ9HCN3 771 aa25.56■■□□□ 1.68
NPLOC4-217ENST00000574897 GSTTP1A0A1W2PQM5 241 aa25.56■■□□□ 1.68
NPLOC4-217ENST00000574897 CHRNB2P17787 502 aa25.56■■□□□ 1.68
NPLOC4-217ENST00000574897 RTP1P59025 263 aa25.56■■□□□ 1.68
NPLOC4-217ENST00000574897 MSL3Q8N5Y2 521 aaKnown RBP25.56■■□□□ 1.68
NPLOC4-217ENST00000574897 HELQQ8TDG4 1101 aa25.56■■□□□ 1.68
NPLOC4-217ENST00000574897 EPS8L1Q8TE68 723 aa25.56■■□□□ 1.68
NPLOC4-217ENST00000574897 TATDN2Q93075 761 aa25.56■■□□□ 1.68
NPLOC4-217ENST00000574897 AP1M1Q9BXS5 423 aa25.56■■□□□ 1.68
NPLOC4-217ENST00000574897 DAAM1Q9Y4D1 1078 aa25.56■■□□□ 1.68
NPLOC4-217ENST00000574897 CALCAP01258 141 aa25.55■■□□□ 1.68
NPLOC4-217ENST00000574897 PPATQ06203 517 aa25.55■■□□□ 1.68
NPLOC4-217ENST00000574897 TRADDQ15628 312 aa25.55■■□□□ 1.68
NPLOC4-217ENST00000574897 SND1Q7KZF4 910 aaKnown RBP eCLIP25.55■■□□□ 1.68
NPLOC4-217ENST00000574897 SV2AQ7L0J3 742 aa25.55■■□□□ 1.68
NPLOC4-217ENST00000574897 RIN2Q8WYP3 895 aaPredicted RBP25.55■■□□□ 1.68
NPLOC4-217ENST00000574897 ASCC2Q9H1I8 757 aaPredicted RBP25.55■■□□□ 1.68
NPLOC4-217ENST00000574897 VPS18Q9P253 973 aa25.55■■□□□ 1.68
NPLOC4-217ENST00000574897 FAN1Q9Y2M0 1017 aa25.55■■□□□ 1.68
NPLOC4-217ENST00000574897 PMM2O15305 246 aa25.55■■□□□ 1.68
NPLOC4-217ENST00000574897 FARP2O94887 1054 aaPredicted RBP25.55■■□□□ 1.68
NPLOC4-217ENST00000574897 HEXIM1O94992 359 aaKnown RBP25.55■■□□□ 1.68
NPLOC4-217ENST00000574897 GLRA2P23416 452 aa25.55■■□□□ 1.68
NPLOC4-217ENST00000574897 MCCD1P59942 119 aaPredicted RBP25.55■■□□□ 1.68
NPLOC4-217ENST00000574897 IRX3P78415 501 aaPredicted RBP25.55■■□□□ 1.68
NPLOC4-217ENST00000574897 BRDTQ58F21 947 aaPredicted RBP25.55■■□□□ 1.68
NPLOC4-217ENST00000574897 FAM71AQ8IYT1 594 aa25.55■■□□□ 1.68
NPLOC4-217ENST00000574897 ZBTB45Q96K62 511 aaPredicted RBP25.55■■□□□ 1.68
NPLOC4-217ENST00000574897 HAPLN2Q9GZV7 340 aa25.55■■□□□ 1.68
NPLOC4-217ENST00000574897 NOCTQ9UK39 431 aaKnown RBP25.55■■□□□ 1.68
NPLOC4-217ENST00000574897 A0A0U1RQG5 324 aaPredicted RBP25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms