RNA–Protein interactions for RNA: ENST00000574412.5

CXCL16-203, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-203ENST00000574412 ZSWIM2Q8NEG5 633 aa23.18■■□□□ 1.3
CXCL16-203ENST00000574412 KCNN1Q92952 543 aa23.18■■□□□ 1.3
CXCL16-203ENST00000574412 CPB2Q96IY4 423 aa23.18■■□□□ 1.3
CXCL16-203ENST00000574412 PRMT7Q9NVM4 692 aaPredicted RBP23.18■■□□□ 1.3
CXCL16-203ENST00000574412 INTS13Q9NVM9 706 aa23.18■■□□□ 1.3
CXCL16-203ENST00000574412 ACKR2O00590 384 aa23.17■■□□□ 1.3
CXCL16-203ENST00000574412 ERLIN2O94905 339 aa23.17■■□□□ 1.3
CXCL16-203ENST00000574412 HARSP12081 509 aaKnown RBP23.17■■□□□ 1.3
CXCL16-203ENST00000574412 SCP2P22307 547 aa23.17■■□□□ 1.3
CXCL16-203ENST00000574412 EIF4BP23588 611 aaKnown RBP23.17■■□□□ 1.3
CXCL16-203ENST00000574412 MATR3P43243 847 aaKnown RBP eCLIP23.17■■□□□ 1.3
CXCL16-203ENST00000574412 KRT31Q15323 416 aa23.17■■□□□ 1.3
CXCL16-203ENST00000574412 CEP135Q66GS9 1140 aa23.17■■□□□ 1.3
CXCL16-203ENST00000574412 POMGNT1Q8WZA1 660 aa23.17■■□□□ 1.3
CXCL16-203ENST00000574412 OSBPL7Q9BZF2 842 aa23.17■■□□□ 1.3
CXCL16-203ENST00000574412 A0A1B0GTH6 734 aa23.16■■□□□ 1.3
CXCL16-203ENST00000574412 GOLGA6L6A8MZA4 724 aa23.16■■□□□ 1.3
CXCL16-203ENST00000574412 CASP4P49662 377 aa23.16■■□□□ 1.3
CXCL16-203ENST00000574412 MGAT3Q09327 533 aa23.16■■□□□ 1.3
CXCL16-203ENST00000574412 HS1BP3Q53T59 392 aa23.16■■□□□ 1.3
CXCL16-203ENST00000574412 ZNF618Q5T7W0 954 aa23.16■■□□□ 1.3
CXCL16-203ENST00000574412 CATSPER4Q7RTX7 472 aa23.16■■□□□ 1.3
CXCL16-203ENST00000574412 ZBTB33Q86T24 672 aa23.16■■□□□ 1.3
CXCL16-203ENST00000574412 GOLGA5Q8TBA6 731 aa23.16■■□□□ 1.3
CXCL16-203ENST00000574412 SAAL1Q96ER3 474 aa23.16■■□□□ 1.3
CXCL16-203ENST00000574412 ACO2Q99798 780 aaKnown RBP23.16■■□□□ 1.3
CXCL16-203ENST00000574412 ATP11BQ9Y2G3 1177 aa23.16■■□□□ 1.3
CXCL16-203ENST00000574412 GOLGA8IPA6NC78 632 aa23.16■■□□□ 1.3
CXCL16-203ENST00000574412 LRRC10BA6NIK2 292 aa23.16■■□□□ 1.3
CXCL16-203ENST00000574412 GOLGA8JA6NMD2 632 aa23.16■■□□□ 1.3
CXCL16-203ENST00000574412 CETN3O15182 167 aa23.16■■□□□ 1.3
CXCL16-203ENST00000574412 TSPAN1O60635 241 aa23.16■■□□□ 1.3
CXCL16-203ENST00000574412 CD4P01730 458 aa23.16■■□□□ 1.3
CXCL16-203ENST00000574412 CKBP12277 381 aa23.16■■□□□ 1.3
CXCL16-203ENST00000574412 EEF1GP26641 437 aaKnown RBP23.16■■□□□ 1.3
CXCL16-203ENST00000574412 TLE2Q04725 743 aa23.16■■□□□ 1.3
CXCL16-203ENST00000574412 ATF7IP2Q5U623 682 aa23.16■■□□□ 1.3
CXCL16-203ENST00000574412 RPAINQ86UA6 219 aa23.16■■□□□ 1.3
CXCL16-203ENST00000574412 RDH13Q8NBN7 331 aa23.16■■□□□ 1.3
CXCL16-203ENST00000574412 ANKRD20A12PQ8NF67 263 aa23.16■■□□□ 1.3
CXCL16-203ENST00000574412 HAPLN2Q9GZV7 340 aa23.16■■□□□ 1.3
CXCL16-203ENST00000574412 HSPBP1Q9NZL4 362 aa23.16■■□□□ 1.3
CXCL16-203ENST00000574412 NOC2LQ9Y3T9 749 aaKnown RBP23.16■■□□□ 1.3
CXCL16-203ENST00000574412 TULP1O00294 542 aaPredicted RBP23.15■■□□□ 1.3
CXCL16-203ENST00000574412 PIGRP01833 764 aa23.15■■□□□ 1.3
CXCL16-203ENST00000574412 TPM3P06753 285 aa23.15■■□□□ 1.3
CXCL16-203ENST00000574412 ARF4P18085 180 aaPredicted RBP23.15■■□□□ 1.3
CXCL16-203ENST00000574412 NR1I3Q14994 352 aa23.15■■□□□ 1.3
CXCL16-203ENST00000574412 FAM187BQ17R55 369 aa23.15■■□□□ 1.3
CXCL16-203ENST00000574412 EEF1DP3Q658K8 133 aa23.15■■□□□ 1.3
CXCL16-203ENST00000574412 ZPBP2Q6X784 338 aa23.15■■□□□ 1.3
CXCL16-203ENST00000574412 NECAB2Q7Z6G3 386 aa23.15■■□□□ 1.3
CXCL16-203ENST00000574412 CNOT6LQ96LI5 555 aaKnown RBP23.15■■□□□ 1.3
CXCL16-203ENST00000574412 TCHPQ9BT92 498 aa23.15■■□□□ 1.3
CXCL16-203ENST00000574412 SEZ6LQ9BYH1 1024 aa23.15■■□□□ 1.3
CXCL16-203ENST00000574412 MAGEC2Q9UBF1 373 aaPredicted RBP23.15■■□□□ 1.3
CXCL16-203ENST00000574412 MROH7Q68CQ1 1323 aa23.15■■□□□ 1.3
CXCL16-203ENST00000574412 CNTNAP2Q9UHC6 1331 aa23.15■■□□□ 1.3
CXCL16-203ENST00000574412 EXOC3O60645 756 aa23.14■■□□□ 1.29
CXCL16-203ENST00000574412 AKAP3O75969 853 aa23.14■■□□□ 1.29
CXCL16-203ENST00000574412 RPL13P26373 211 aaKnown RBP23.14■■□□□ 1.29
CXCL16-203ENST00000574412 LRRC26Q2I0M4 334 aa23.14■■□□□ 1.29
CXCL16-203ENST00000574412 FAM228AQ86W67 206 aa23.14■■□□□ 1.29
CXCL16-203ENST00000574412 FAM114A1Q8IWE2 563 aa23.14■■□□□ 1.29
CXCL16-203ENST00000574412 ZC3H3Q8IXZ2 948 aaKnown RBP23.14■■□□□ 1.29
CXCL16-203ENST00000574412 TAB2Q9NYJ8 693 aa23.14■■□□□ 1.29
CXCL16-203ENST00000574412 TLR3O15455 904 aaKnown RBP23.13■■□□□ 1.29
CXCL16-203ENST00000574412 FGFR1OPO95684 399 aaKnown RBP23.13■■□□□ 1.29
CXCL16-203ENST00000574412 RPLP2P05387 115 aaKnown RBP23.13■■□□□ 1.29
CXCL16-203ENST00000574412 GHRP10912 638 aa23.13■■□□□ 1.29
CXCL16-203ENST00000574412 SFPQP23246 707 aaKnown RBP eCLIP23.13■■□□□ 1.29
CXCL16-203ENST00000574412 COPB1P53618 953 aaKnown RBP23.13■■□□□ 1.29
CXCL16-203ENST00000574412 SEZ6Q53EL9 994 aa23.13■■□□□ 1.29
CXCL16-203ENST00000574412 TMC6Q7Z403 805 aa23.13■■□□□ 1.29
CXCL16-203ENST00000574412 PRIMPOLQ96LW4 560 aa23.13■■□□□ 1.29
CXCL16-203ENST00000574412 CEP63Q96MT8 703 aa23.13■■□□□ 1.29
CXCL16-203ENST00000574412 RTN4Q9NQC3 1192 aaKnown RBP23.13■■□□□ 1.29
CXCL16-203ENST00000574412 DMAC2Q9NW81 257 aa23.13■■□□□ 1.29
CXCL16-203ENST00000574412 CGNQ9P2M7 1197 aaKnown RBP23.13■■□□□ 1.29
CXCL16-203ENST00000574412 DCDC2CA8MYV0 355 aa23.13■■□□□ 1.29
CXCL16-203ENST00000574412 CLDN3O15551 220 aa23.13■■□□□ 1.29
CXCL16-203ENST00000574412 TOM1L1O75674 476 aa23.13■■□□□ 1.29
CXCL16-203ENST00000574412 NFIL3Q16649 462 aa23.13■■□□□ 1.29
CXCL16-203ENST00000574412 ZNF568Q3ZCX4 644 aa23.13■■□□□ 1.29
CXCL16-203ENST00000574412 CCDC40Q4G0X9 1142 aa23.13■■□□□ 1.29
CXCL16-203ENST00000574412 FILIP1LQ4L180 1135 aa23.13■■□□□ 1.29
CXCL16-203ENST00000574412 TSHZ1Q6ZSZ6 1077 aa23.13■■□□□ 1.29
CXCL16-203ENST00000574412 ANKRD33Q7Z3H0 272 aa23.13■■□□□ 1.29
CXCL16-203ENST00000574412 VSTM4Q8IW00 320 aa23.13■■□□□ 1.29
CXCL16-203ENST00000574412 ZNF710Q8N1W2 664 aa23.13■■□□□ 1.29
CXCL16-203ENST00000574412 MSTO1Q9BUK6 570 aa23.13■■□□□ 1.29
CXCL16-203ENST00000574412 RPS6KA5O75582 802 aa23.12■■□□□ 1.29
CXCL16-203ENST00000574412 GARTP22102 1010 aa23.12■■□□□ 1.29
CXCL16-203ENST00000574412 SNRPFP62306 86 aaKnown RBP23.12■■□□□ 1.29
CXCL16-203ENST00000574412 FAAP100Q0VG06 881 aa23.12■■□□□ 1.29
CXCL16-203ENST00000574412 NFX1Q12986 1120 aaKnown RBP23.12■■□□□ 1.29
CXCL16-203ENST00000574412 ZBTB41Q5SVQ8 909 aa23.12■■□□□ 1.29
CXCL16-203ENST00000574412 CCDC186Q7Z3E2 898 aa23.12■■□□□ 1.29
CXCL16-203ENST00000574412 SLC9A9Q8IVB4 645 aa23.12■■□□□ 1.29
CXCL16-203ENST00000574412 C12orf56Q8IXR9 622 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms