RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 MLH1P40692 756 aa23.46■■□□□ 1.35
CHRNB1-206ENST00000574054 POU5F1BQ06416 359 aa23.46■■□□□ 1.35
CHRNB1-206ENST00000574054 GNL2Q13823 731 aaKnown RBP23.46■■□□□ 1.35
CHRNB1-206ENST00000574054 PTPN14Q15678 1187 aa23.46■■□□□ 1.35
CHRNB1-206ENST00000574054 ZNF174Q15697 407 aa23.46■■□□□ 1.35
CHRNB1-206ENST00000574054 NECTIN4Q96NY8 510 aa23.46■■□□□ 1.35
CHRNB1-206ENST00000574054 GAD1Q99259 594 aa23.46■■□□□ 1.35
CHRNB1-206ENST00000574054 LLPHQ9BRT6 129 aaKnown RBP23.46■■□□□ 1.35
CHRNB1-206ENST00000574054 RNF39Q9H2S5 420 aa23.46■■□□□ 1.35
CHRNB1-206ENST00000574054 POMKQ9H5K3 350 aa23.46■■□□□ 1.35
CHRNB1-206ENST00000574054 GPRC5CQ9NQ84 441 aa23.46■■□□□ 1.35
CHRNB1-206ENST00000574054 STK39Q9UEW8 545 aa23.46■■□□□ 1.35
CHRNB1-206ENST00000574054 NR2E1Q9Y466 385 aa23.46■■□□□ 1.35
CHRNB1-206ENST00000574054 ARL5CA6NH57 179 aa23.45■■□□□ 1.34
CHRNB1-206ENST00000574054 LRRIQ4A6NIV6 560 aa23.45■■□□□ 1.34
CHRNB1-206ENST00000574054 SPDYE4A6NLX3 237 aa23.45■■□□□ 1.34
CHRNB1-206ENST00000574054 NRP1O14786 923 aa23.45■■□□□ 1.34
CHRNB1-206ENST00000574054 B4GALT5O43286 388 aa23.45■■□□□ 1.34
CHRNB1-206ENST00000574054 OR52Z1P0C646 297 aa23.45■■□□□ 1.34
CHRNB1-206ENST00000574054 SPATA31C1P0DKV0 1188 aa23.45■■□□□ 1.34
CHRNB1-206ENST00000574054 ARF4P18085 180 aaPredicted RBP23.45■■□□□ 1.34
CHRNB1-206ENST00000574054 MTHFRP42898 656 aa23.45■■□□□ 1.34
CHRNB1-206ENST00000574054 OR1G1P47890 313 aa23.45■■□□□ 1.34
CHRNB1-206ENST00000574054 AMHR2Q16671 573 aa23.45■■□□□ 1.34
CHRNB1-206ENST00000574054 KANK3Q6NY19 840 aa23.45■■□□□ 1.34
CHRNB1-206ENST00000574054 HACE1Q8IYU2 909 aa23.45■■□□□ 1.34
CHRNB1-206ENST00000574054 PBXIP1Q96AQ6 731 aa23.45■■□□□ 1.34
CHRNB1-206ENST00000574054 RIPOR3Q96MK2 946 aa23.45■■□□□ 1.34
CHRNB1-206ENST00000574054 TUFT1Q9NNX1 390 aa23.45■■□□□ 1.34
CHRNB1-206ENST00000574054 MED24O75448 989 aa23.44■■□□□ 1.34
CHRNB1-206ENST00000574054 XRCC6P12956 609 aaKnown RBP eCLIP23.44■■□□□ 1.34
CHRNB1-206ENST00000574054 SCNN1GP51170 649 aa23.44■■□□□ 1.34
CHRNB1-206ENST00000574054 CABP7Q86V35 215 aa23.44■■□□□ 1.34
CHRNB1-206ENST00000574054 PPFIBP1Q86W92 1011 aa23.44■■□□□ 1.34
CHRNB1-206ENST00000574054 CDR2LQ86X02 465 aaPredicted RBP23.44■■□□□ 1.34
CHRNB1-206ENST00000574054 CATSPER3Q86XQ3 398 aa23.44■■□□□ 1.34
CHRNB1-206ENST00000574054 FAM184AQ8NB25 1140 aa23.44■■□□□ 1.34
CHRNB1-206ENST00000574054 ERMNQ8TAM6 284 aa23.44■■□□□ 1.34
CHRNB1-206ENST00000574054 SLC22A17Q8WUG5 538 aa23.44■■□□□ 1.34
CHRNB1-206ENST00000574054 ZFP42Q96MM3 310 aa23.44■■□□□ 1.34
CHRNB1-206ENST00000574054 EMILIN2Q9BXX0 1053 aa23.44■■□□□ 1.34
CHRNB1-206ENST00000574054 FOXP1Q9H334 677 aaPredicted RBP23.44■■□□□ 1.34
CHRNB1-206ENST00000574054 NXF3Q9H4D5 531 aaKnown RBP23.44■■□□□ 1.34
CHRNB1-206ENST00000574054 C2CD2LO14523 706 aa23.43■■□□□ 1.34
CHRNB1-206ENST00000574054 NPTXRO95502 500 aa23.43■■□□□ 1.34
CHRNB1-206ENST00000574054 KLRC2P26717 231 aa23.43■■□□□ 1.34
CHRNB1-206ENST00000574054 HMGN5P82970 282 aaKnown RBP23.43■■□□□ 1.34
CHRNB1-206ENST00000574054 PTPN21Q16825 1174 aa23.43■■□□□ 1.34
CHRNB1-206ENST00000574054 POTEGQ6S5H5 508 aa23.43■■□□□ 1.34
CHRNB1-206ENST00000574054 COLGALT2Q8IYK4 626 aa23.43■■□□□ 1.34
CHRNB1-206ENST00000574054 MCPH1Q8NEM0 835 aa23.43■■□□□ 1.34
CHRNB1-206ENST00000574054 ZSCAN31Q96LW9 406 aaPredicted RBP23.43■■□□□ 1.34
CHRNB1-206ENST00000574054 NACC1Q96RE7 527 aa23.43■■□□□ 1.34
CHRNB1-206ENST00000574054 POLR3CQ9BUI4 534 aaPredicted RBP23.43■■□□□ 1.34
CHRNB1-206ENST00000574054 NFKBIZQ9BYH8 718 aa23.43■■□□□ 1.34
CHRNB1-206ENST00000574054 MRPL17Q9NRX2 175 aaKnown RBP23.43■■□□□ 1.34
CHRNB1-206ENST00000574054 ZDBF2Q9HCK1 2354 aa23.42■■□□□ 1.34
CHRNB1-206ENST00000574054 ZNF318Q5VUA4 2279 aa23.42■■□□□ 1.34
CHRNB1-206ENST00000574054 URODP06132 367 aa23.42■■□□□ 1.34
CHRNB1-206ENST00000574054 RBM25P49756 843 aaKnown RBP23.42■■□□□ 1.34
CHRNB1-206ENST00000574054 TTC38Q5R3I4 469 aa23.42■■□□□ 1.34
CHRNB1-206ENST00000574054 SLC27A1Q6PCB7 646 aa23.42■■□□□ 1.34
CHRNB1-206ENST00000574054 FBXL18Q96ME1 805 aa23.42■■□□□ 1.34
CHRNB1-206ENST00000574054 DBR1Q9UK59 544 aaKnown RBP23.42■■□□□ 1.34
CHRNB1-206ENST00000574054 GIT1Q9Y2X7 761 aa23.42■■□□□ 1.34
CHRNB1-206ENST00000574054 ARHGEF35A5YM69 484 aa23.41■■□□□ 1.34
CHRNB1-206ENST00000574054 C2CD4DB7Z1M9 353 aa23.41■■□□□ 1.34
CHRNB1-206ENST00000574054 INPPL1O15357 1258 aa23.41■■□□□ 1.34
CHRNB1-206ENST00000574054 CNPP09543 421 aaKnown RBP23.41■■□□□ 1.34
CHRNB1-206ENST00000574054 AKAP5P24588 427 aa23.41■■□□□ 1.34
CHRNB1-206ENST00000574054 HOXD11P31277 338 aaPredicted RBP23.41■■□□□ 1.34
CHRNB1-206ENST00000574054 SIGLEC14Q08ET2 396 aa23.41■■□□□ 1.34
CHRNB1-206ENST00000574054 ORC2Q13416 577 aaPredicted RBP23.41■■□□□ 1.34
CHRNB1-206ENST00000574054 TMEM132AQ24JP5 1023 aa23.41■■□□□ 1.34
CHRNB1-206ENST00000574054 ATAT1Q5SQI0 421 aa23.41■■□□□ 1.34
CHRNB1-206ENST00000574054 KIAA1841Q6NSI8 718 aa23.41■■□□□ 1.34
CHRNB1-206ENST00000574054 TMC5Q6UXY8 1006 aa23.41■■□□□ 1.34
CHRNB1-206ENST00000574054 NOSTRINQ8IVI9 506 aa23.41■■□□□ 1.34
CHRNB1-206ENST00000574054 ZBTB8OSQ8IWT0 167 aa23.41■■□□□ 1.34
CHRNB1-206ENST00000574054 SUGP1Q8IWZ8 645 aaKnown RBP23.41■■□□□ 1.34
CHRNB1-206ENST00000574054 FBXO18Q8NFZ0 1043 aa23.41■■□□□ 1.34
CHRNB1-206ENST00000574054 KLHL5Q96PQ7 755 aa23.41■■□□□ 1.34
CHRNB1-206ENST00000574054 HERC2P3Q9BVR0 1158 aa23.41■■□□□ 1.34
CHRNB1-206ENST00000574054 SH2B1Q9NRF2 756 aaPredicted RBP23.41■■□□□ 1.34
CHRNB1-206ENST00000574054 MARCH5Q9NX47 278 aa23.41■■□□□ 1.34
CHRNB1-206ENST00000574054 MIOSQ9NXC5 875 aa23.41■■□□□ 1.34
CHRNB1-206ENST00000574054 PARP2Q9UGN5 583 aa23.41■■□□□ 1.34
CHRNB1-206ENST00000574054 NR1I2O75469 434 aa23.4■■□□□ 1.34
CHRNB1-206ENST00000574054 SOD2P04179 222 aa23.4■■□□□ 1.34
CHRNB1-206ENST00000574054 CENPBP07199 599 aaPredicted RBP23.4■■□□□ 1.34
CHRNB1-206ENST00000574054 PADI6Q6TGC4 694 aa23.4■■□□□ 1.34
CHRNB1-206ENST00000574054 TAS1R1Q7RTX1 841 aa23.4■■□□□ 1.34
CHRNB1-206ENST00000574054 BMP8AQ7Z5Y6 402 aa23.4■■□□□ 1.34
CHRNB1-206ENST00000574054 KCNH6Q9H252 994 aa23.4■■□□□ 1.34
CHRNB1-206ENST00000574054 SFXN1Q9H9B4 322 aa23.4■■□□□ 1.34
CHRNB1-206ENST00000574054 PRMT7Q9NVM4 692 aaPredicted RBP23.4■■□□□ 1.34
CHRNB1-206ENST00000574054 KLK14Q9P0G3 267 aa23.4■■□□□ 1.34
CHRNB1-206ENST00000574054 NOL7Q9UMY1 257 aaKnown RBP23.4■■□□□ 1.34
CHRNB1-206ENST00000574054 RPA1P27694 616 aa23.39■■□□□ 1.33
CHRNB1-206ENST00000574054 CLCN4P51793 760 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms