RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 SERTAD1Q9UHV2 236 aa14.03□□□□□ -0.16
TRAPPC1-206ENST00000573989 TBKBP1A7MCY6 615 aa14.02□□□□□ -0.17
TRAPPC1-206ENST00000573989 ITGA4P13612 1032 aa14.02□□□□□ -0.17
TRAPPC1-206ENST00000573989 AFMP43652 599 aa14.02□□□□□ -0.17
TRAPPC1-206ENST00000573989 ALCAMQ13740 583 aa14.02□□□□□ -0.17
TRAPPC1-206ENST00000573989 GLB1LQ6UWU2 654 aa14.02□□□□□ -0.17
TRAPPC1-206ENST00000573989 MRPL10Q7Z7H8 261 aaKnown RBP14.02□□□□□ -0.17
TRAPPC1-206ENST00000573989 SFR1Q86XK3 245 aa14.02□□□□□ -0.17
TRAPPC1-206ENST00000573989 STAMQ92783 540 aa14.02□□□□□ -0.17
TRAPPC1-206ENST00000573989 CCDC47Q96A33 483 aaKnown RBP14.02□□□□□ -0.17
TRAPPC1-206ENST00000573989 HVCN1Q96D96 273 aa14.02□□□□□ -0.17
TRAPPC1-206ENST00000573989 TCHPQ9BT92 498 aa14.02□□□□□ -0.17
TRAPPC1-206ENST00000573989 MRPL9Q9BYD2 267 aaKnown RBP14.02□□□□□ -0.17
TRAPPC1-206ENST00000573989 ST6GALNAC4Q9H4F1 302 aa14.02□□□□□ -0.17
TRAPPC1-206ENST00000573989 OLFML3Q9NRN5 406 aa14.02□□□□□ -0.17
TRAPPC1-206ENST00000573989 TNFSF13BQ9Y275 285 aa14.02□□□□□ -0.17
TRAPPC1-206ENST00000573989 IPPQ9Y573 584 aa14.02□□□□□ -0.17
TRAPPC1-206ENST00000573989 PCDHB13Q9Y5F0 798 aa14.02□□□□□ -0.17
TRAPPC1-206ENST00000573989 LAMA2P24043 3122 aaKnown RBP14.02□□□□□ -0.17
TRAPPC1-206ENST00000573989 FRMD3A2A2Y4 597 aa14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 LCHNA4D1U4 455 aa14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 LINC01553A4QN01 128 aa14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 CARNS1A5YM72 827 aa14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 RBAK-RBAKDNI3L0D1 243 aa14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 ACTN4O43707 911 aaKnown RBP14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 ZNF202O95125 648 aa14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 NPTXRO95502 500 aa14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 GTF2BQ00403 316 aa14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 TAP1Q03518 808 aa14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 LONRF3Q496Y0 759 aa14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 PAN2Q504Q3 1202 aaKnown RBP14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 UBXN11Q5T124 520 aa14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 SPOUT1Q5T280 376 aaKnown RBP14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 ZPBP2Q6X784 338 aa14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 ZNF720Q7Z2F6 126 aa14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 ZNF598Q86UK7 904 aaKnown RBP14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 LRRC43Q8N309 656 aa14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 DEFB123Q8N688 67 aa14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 URGCPQ8TCY9 931 aa14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 ACO2Q99798 780 aaKnown RBP14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 EIF2AQ9BY44 585 aaKnown RBP14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 SEMA6BQ9H3T3 888 aa14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 PDZD7Q9H5P4 517 aa14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 RSAD1Q9HA92 442 aa14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 RC3H2Q9HBD1 1191 aaKnown RBP14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 AAASQ9NRG9 546 aa14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 KANSL3Q9P2N6 904 aa14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 HOOK1Q9UJC3 728 aaKnown RBP14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 TBX20Q9UMR3 447 aa14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 EXOC7Q9UPT5 735 aa14.01□□□□□ -0.17
TRAPPC1-206ENST00000573989 TDRD15B5MCY1 1934 aaKnown RBP14□□□□□ -0.17
TRAPPC1-206ENST00000573989 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14□□□□□ -0.17
TRAPPC1-206ENST00000573989 PVALEFA0A1B0GWK0 134 aa14□□□□□ -0.17
TRAPPC1-206ENST00000573989 HNRNPDLO14979 420 aaKnown RBP14□□□□□ -0.17
TRAPPC1-206ENST00000573989 TOM1L1O75674 476 aa14□□□□□ -0.17
TRAPPC1-206ENST00000573989 GCNT3O95395 438 aa14□□□□□ -0.17
TRAPPC1-206ENST00000573989 FGFR1P11362 822 aa14□□□□□ -0.17
TRAPPC1-206ENST00000573989 ATF7P17544 494 aaPredicted RBP14□□□□□ -0.17
TRAPPC1-206ENST00000573989 NMT1P30419 496 aaKnown RBP14□□□□□ -0.17
TRAPPC1-206ENST00000573989 MATR3P43243 847 aaKnown RBP eCLIP14□□□□□ -0.17
TRAPPC1-206ENST00000573989 LIG4P49917 911 aa14□□□□□ -0.17
TRAPPC1-206ENST00000573989 FAM160A1Q05DH4 1040 aa14□□□□□ -0.17
TRAPPC1-206ENST00000573989 ZNF568Q3ZCX4 644 aa14□□□□□ -0.17
TRAPPC1-206ENST00000573989 NT5DC1Q5TFE4 455 aa14□□□□□ -0.17
TRAPPC1-206ENST00000573989 KRBA2Q6ZNG9 492 aa14□□□□□ -0.17
TRAPPC1-206ENST00000573989 UNC13DQ70J99 1090 aa14□□□□□ -0.17
TRAPPC1-206ENST00000573989 TAS1R3Q7RTX0 852 aa14□□□□□ -0.17
TRAPPC1-206ENST00000573989 CDR2LQ86X02 465 aaPredicted RBP14□□□□□ -0.17
TRAPPC1-206ENST00000573989 TMEM87AQ8NBN3 555 aa14□□□□□ -0.17
TRAPPC1-206ENST00000573989 HELQQ8TDG4 1101 aa14□□□□□ -0.17
TRAPPC1-206ENST00000573989 PAGE5Q96GU1 130 aa14□□□□□ -0.17
TRAPPC1-206ENST00000573989 TARS2Q9BW92 718 aaKnown RBP14□□□□□ -0.17
TRAPPC1-206ENST00000573989 GOLPH3LQ9H4A5 285 aa14□□□□□ -0.17
TRAPPC1-206ENST00000573989 GIT1Q9Y2X7 761 aa14□□□□□ -0.17
TRAPPC1-206ENST00000573989 ZMYM2Q9UBW7 1377 aa13.99□□□□□ -0.17
TRAPPC1-206ENST00000573989 CITO14578 2027 aa13.99□□□□□ -0.17
TRAPPC1-206ENST00000573989 CLDN3O15551 220 aa13.99□□□□□ -0.17
TRAPPC1-206ENST00000573989 GTPBP6O43824 516 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC1-206ENST00000573989 RB1P06400 928 aa13.99□□□□□ -0.17
TRAPPC1-206ENST00000573989 ERVK-21P61565 698 aa13.99□□□□□ -0.17
TRAPPC1-206ENST00000573989 RNASELQ05823 741 aaKnown RBP13.99□□□□□ -0.17
TRAPPC1-206ENST00000573989 COASYQ13057 564 aa13.99□□□□□ -0.17
TRAPPC1-206ENST00000573989 KYAT1Q16773 422 aa13.99□□□□□ -0.17
TRAPPC1-206ENST00000573989 MPZL3Q6UWV2 235 aa13.99□□□□□ -0.17
TRAPPC1-206ENST00000573989 MAP4K3Q8IVH8 894 aa13.99□□□□□ -0.17
TRAPPC1-206ENST00000573989 TMEM192Q8IY95 271 aa13.99□□□□□ -0.17
TRAPPC1-206ENST00000573989 SMG8Q8ND04 991 aaKnown RBP13.99□□□□□ -0.17
TRAPPC1-206ENST00000573989 CLP1Q92989 425 aaKnown RBP13.99□□□□□ -0.17
TRAPPC1-206ENST00000573989 LPPQ93052 612 aa13.99□□□□□ -0.17
TRAPPC1-206ENST00000573989 CASD1Q96PB1 797 aa13.99□□□□□ -0.17
TRAPPC1-206ENST00000573989 GBP4Q96PP9 640 aa13.99□□□□□ -0.17
TRAPPC1-206ENST00000573989 ACCSQ96QU6 501 aa13.99□□□□□ -0.17
TRAPPC1-206ENST00000573989 GAS2L1Q99501 681 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC1-206ENST00000573989 APOL6Q9BWW8 343 aa13.99□□□□□ -0.17
TRAPPC1-206ENST00000573989 PLVAPQ9BX97 442 aa13.99□□□□□ -0.17
TRAPPC1-206ENST00000573989 BLZF1Q9H2G9 400 aa13.99□□□□□ -0.17
TRAPPC1-206ENST00000573989 TTYH1Q9H313 450 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC1-206ENST00000573989 EXOC1Q9NV70 894 aa13.99□□□□□ -0.17
TRAPPC1-206ENST00000573989 TBC1D7Q9P0N9 293 aa13.99□□□□□ -0.17
TRAPPC1-206ENST00000573989 PARP2Q9UGN5 583 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms