RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 RBM26Q5T8P6 1007 aaKnown RBP20.52■□□□□ 0.88
SCARF1-206ENST00000573852 CCDC174Q6PII3 467 aa20.52■□□□□ 0.88
SCARF1-206ENST00000573852 PIGWQ7Z7B1 504 aa20.52■□□□□ 0.88
SCARF1-206ENST00000573852 COL23A1Q86Y22 540 aaPredicted RBP20.52■□□□□ 0.88
SCARF1-206ENST00000573852 CD101Q93033 1021 aa20.52■□□□□ 0.88
SCARF1-206ENST00000573852 ACP6Q9NPH0 428 aa20.52■□□□□ 0.88
SCARF1-206ENST00000573852 PTPN22Q9Y2R2 807 aa20.52■□□□□ 0.88
SCARF1-206ENST00000573852 SPATA31A6Q5VVP1 1343 aa20.52■□□□□ 0.88
SCARF1-206ENST00000573852 ARHGEF35A5YM69 484 aa20.52■□□□□ 0.88
SCARF1-206ENST00000573852 K7ENM7 598 aa20.52■□□□□ 0.88
SCARF1-206ENST00000573852 RTN2O75298 545 aa20.52■□□□□ 0.88
SCARF1-206ENST00000573852 AGTP01019 485 aa20.52■□□□□ 0.88
SCARF1-206ENST00000573852 POLR2MP0CAP2 368 aa20.52■□□□□ 0.88
SCARF1-206ENST00000573852 VAMP7P51809 220 aa20.52■□□□□ 0.88
SCARF1-206ENST00000573852 ADCY2Q08462 1091 aa20.52■□□□□ 0.88
SCARF1-206ENST00000573852 SNCBQ16143 134 aa20.52■□□□□ 0.88
SCARF1-206ENST00000573852 EPC2Q52LR7 807 aa20.52■□□□□ 0.88
SCARF1-206ENST00000573852 BTBD6Q96KE9 485 aa20.52■□□□□ 0.88
SCARF1-206ENST00000573852 PRMT1Q99873 361 aaKnown RBP20.52■□□□□ 0.88
SCARF1-206ENST00000573852 MRIQ9BWK5 157 aa20.52■□□□□ 0.88
SCARF1-206ENST00000573852 INTS9Q9NV88 658 aaKnown RBP20.52■□□□□ 0.88
SCARF1-206ENST00000573852 MTRF1LQ9UGC7 380 aaKnown RBP20.52■□□□□ 0.88
SCARF1-206ENST00000573852 LTBP4Q8N2S1 1624 aa20.52■□□□□ 0.87
SCARF1-206ENST00000573852 ASAP2O43150 1006 aa20.51■□□□□ 0.87
SCARF1-206ENST00000573852 PPIP5K2O43314 1243 aa20.51■□□□□ 0.87
SCARF1-206ENST00000573852 RIPK2O43353 540 aa20.51■□□□□ 0.87
SCARF1-206ENST00000573852 MUTP22033 750 aa20.51■□□□□ 0.87
SCARF1-206ENST00000573852 KCNJ1P48048 391 aa20.51■□□□□ 0.87
SCARF1-206ENST00000573852 STAT2P52630 851 aa20.51■□□□□ 0.87
SCARF1-206ENST00000573852 SEL1L2Q5TEA6 688 aa20.51■□□□□ 0.87
SCARF1-206ENST00000573852 PODNQ7Z5L7 613 aa20.51■□□□□ 0.87
SCARF1-206ENST00000573852 NOP9Q86U38 636 aaKnown RBP20.51■□□□□ 0.87
SCARF1-206ENST00000573852 PLEKHO2Q8TD55 490 aa20.51■□□□□ 0.87
SCARF1-206ENST00000573852 CBWD1Q9BRT8 395 aa20.51■□□□□ 0.87
SCARF1-206ENST00000573852 TPX2Q9ULW0 747 aaKnown RBP20.51■□□□□ 0.87
SCARF1-206ENST00000573852 COILP38432 576 aaPredicted RBP20.51■□□□□ 0.87
SCARF1-206ENST00000573852 INTS8Q75QN2 995 aaKnown RBP20.51■□□□□ 0.87
SCARF1-206ENST00000573852 TMEM109Q9BVC6 243 aa20.51■□□□□ 0.87
SCARF1-206ENST00000573852 PARP2Q9UGN5 583 aa20.51■□□□□ 0.87
SCARF1-206ENST00000573852 DBR1Q9UK59 544 aaKnown RBP20.51■□□□□ 0.87
SCARF1-206ENST00000573852 DNAJC8O75937 253 aaPredicted RBP20.5■□□□□ 0.87
SCARF1-206ENST00000573852 NPR1P16066 1061 aa20.5■□□□□ 0.87
SCARF1-206ENST00000573852 RDXP35241 583 aaKnown RBP20.5■□□□□ 0.87
SCARF1-206ENST00000573852 MYBPC2Q14324 1141 aa20.5■□□□□ 0.87
SCARF1-206ENST00000573852 SIX1Q15475 284 aaPredicted RBP20.5■□□□□ 0.87
SCARF1-206ENST00000573852 B3GNT9Q6UX72 402 aa20.5■□□□□ 0.87
SCARF1-206ENST00000573852 CCDC105Q8IYK2 499 aa20.5■□□□□ 0.87
SCARF1-206ENST00000573852 WDR11Q9BZH6 1224 aa20.5■□□□□ 0.87
SCARF1-206ENST00000573852 NOCTQ9UK39 431 aaKnown RBP20.5■□□□□ 0.87
SCARF1-206ENST00000573852 LOC102724159A0A0B4J2E5 919 aa20.5■□□□□ 0.87
SCARF1-206ENST00000573852 GGPS1O95749 300 aa20.5■□□□□ 0.87
SCARF1-206ENST00000573852 RARAP10276 462 aa20.5■□□□□ 0.87
SCARF1-206ENST00000573852 GBP1P32455 592 aa20.5■□□□□ 0.87
SCARF1-206ENST00000573852 AUHQ13825 339 aaKnown RBP20.5■□□□□ 0.87
SCARF1-206ENST00000573852 PWP2Q15269 919 aaKnown RBP20.5■□□□□ 0.87
SCARF1-206ENST00000573852 CYP1B1Q16678 543 aa20.5■□□□□ 0.87
SCARF1-206ENST00000573852 TNFAIP8L3Q5GJ75 292 aa20.5■□□□□ 0.87
SCARF1-206ENST00000573852 DACT2Q5SW24 774 aa20.5■□□□□ 0.87
SCARF1-206ENST00000573852 SLC13A5Q86YT5 568 aaPredicted RBP20.5■□□□□ 0.87
SCARF1-206ENST00000573852 EPS8L1Q8TE68 723 aa20.5■□□□□ 0.87
SCARF1-206ENST00000573852 ART4Q93070 314 aa20.5■□□□□ 0.87
SCARF1-206ENST00000573852 WNT8AQ9H1J5 351 aa20.5■□□□□ 0.87
SCARF1-206ENST00000573852 TDRD3Q9H7E2 651 aaKnown RBP20.5■□□□□ 0.87
SCARF1-206ENST00000573852 DDX39AO00148 427 aaKnown RBP20.5■□□□□ 0.87
SCARF1-206ENST00000573852 VIL1P09327 827 aaKnown RBP20.5■□□□□ 0.87
SCARF1-206ENST00000573852 PREPLQ4J6C6 727 aaPredicted RBP20.5■□□□□ 0.87
SCARF1-206ENST00000573852 CCDC38Q502W7 563 aa20.5■□□□□ 0.87
SCARF1-206ENST00000573852 PADI6Q6TGC4 694 aa20.5■□□□□ 0.87
SCARF1-206ENST00000573852 ELAC2Q9BQ52 826 aaKnown RBP20.5■□□□□ 0.87
SCARF1-206ENST00000573852 RASGRF2O14827 1237 aa20.49■□□□□ 0.87
SCARF1-206ENST00000573852 NPM3O75607 178 aaKnown RBP20.49■□□□□ 0.87
SCARF1-206ENST00000573852 MTA2O94776 668 aa20.49■□□□□ 0.87
SCARF1-206ENST00000573852 RARGP13631 454 aa20.49■□□□□ 0.87
SCARF1-206ENST00000573852 IFNAR2P48551 515 aa20.49■□□□□ 0.87
SCARF1-206ENST00000573852 CETN1Q12798 172 aa20.49■□□□□ 0.87
SCARF1-206ENST00000573852 ANKS4BQ8N8V4 417 aa20.49■□□□□ 0.87
SCARF1-206ENST00000573852 ACER1Q8TDN7 264 aa20.49■□□□□ 0.87
SCARF1-206ENST00000573852 POP1Q99575 1024 aaKnown RBP20.49■□□□□ 0.87
SCARF1-206ENST00000573852 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.49■□□□□ 0.87
SCARF1-206ENST00000573852 SCN9AQ15858 1988 aa20.49■□□□□ 0.87
SCARF1-206ENST00000573852 IPO5O00410 1097 aaKnown RBP20.49■□□□□ 0.87
SCARF1-206ENST00000573852 MKRN4PQ13434 485 aaPredicted RBP20.49■□□□□ 0.87
SCARF1-206ENST00000573852 SLMAPQ14BN4 828 aa20.49■□□□□ 0.87
SCARF1-206ENST00000573852 LLGL1Q15334 1064 aa20.49■□□□□ 0.87
SCARF1-206ENST00000573852 SLC47A2Q86VL8 602 aa20.49■□□□□ 0.87
SCARF1-206ENST00000573852 TEKT3Q9BXF9 490 aa20.49■□□□□ 0.87
SCARF1-206ENST00000573852 CCDC134Q9H6E4 229 aa20.49■□□□□ 0.87
SCARF1-206ENST00000573852 CYP26A1O43174 497 aa20.48■□□□□ 0.87
SCARF1-206ENST00000573852 ITIH4Q14624 930 aa20.48■□□□□ 0.87
SCARF1-206ENST00000573852 STRIP1Q5VSL9 837 aa20.48■□□□□ 0.87
SCARF1-206ENST00000573852 TAX1BP1Q86VP1 789 aa20.48■□□□□ 0.87
SCARF1-206ENST00000573852 CCDC25Q86WR0 208 aa20.48■□□□□ 0.87
SCARF1-206ENST00000573852 FAM71AQ8IYT1 594 aa20.48■□□□□ 0.87
SCARF1-206ENST00000573852 KREMEN1Q96MU8 473 aa20.48■□□□□ 0.87
SCARF1-206ENST00000573852 NUP85Q9BW27 656 aa20.48■□□□□ 0.87
SCARF1-206ENST00000573852 CCDC113Q9H0I3 377 aa20.48■□□□□ 0.87
SCARF1-206ENST00000573852 SLX4Q8IY92 1834 aa20.48■□□□□ 0.87
SCARF1-206ENST00000573852 P4HA2O15460 535 aa20.48■□□□□ 0.87
SCARF1-206ENST00000573852 SPOPO43791 374 aa20.48■□□□□ 0.87
SCARF1-206ENST00000573852 VIMP08670 466 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms