RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 ARF4P18085 180 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 SP100P23497 879 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 RPA1P27694 616 aa10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 OR1G1P47890 313 aa10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 SCNN1GP51170 649 aa10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 POU5F1BQ06416 359 aa10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 GIT2Q14161 759 aa10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 CBX2Q14781 532 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 TPRNQ4KMQ1 711 aa10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 CES5AQ6NT32 575 aa10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 SLC27A1Q6PCB7 646 aa10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 PADI6Q6TGC4 694 aa10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 MRPL10Q7Z7H8 261 aaKnown RBP10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 DDX53Q86TM3 631 aaKnown RBP10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 IFNLR1Q8IU57 520 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 RNF135Q8IUD6 432 aa10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 MRPL43Q8N983 215 aaKnown RBP10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 SMG8Q8ND04 991 aaKnown RBP10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 SNX29Q8TEQ0 813 aa10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 BCL7CQ8WUZ0 217 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 RPS6KC1Q96S38 1066 aa10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 PHF7Q9BWX1 381 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 C2orf40Q9H1Z8 148 aa10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 NXF3Q9H4D5 531 aaKnown RBP10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 TSHZ2Q9NRE2 1034 aa10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 PRMT7Q9NVM4 692 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 LRWD1Q9UFC0 647 aa10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 PARP2Q9UGN5 583 aa10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 FAN1Q9Y2M0 1017 aa10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 PRG3Q9Y2Y8 225 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 HES2Q9Y543 173 aa10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 HCFC2Q9Y5Z7 792 aa10.69□□□□□ -0.7
NPLOC4-212ENST00000573328 ARL5CA6NH57 179 aa10.68□□□□□ -0.7
NPLOC4-212ENST00000573328 H3BQV1 296 aa10.68□□□□□ -0.7
NPLOC4-212ENST00000573328 B4GALT3O60512 393 aa10.68□□□□□ -0.7
NPLOC4-212ENST00000573328 CLASP2O75122 1294 aaKnown RBP10.68□□□□□ -0.7
NPLOC4-212ENST00000573328 NR1I2O75469 434 aa10.68□□□□□ -0.7
NPLOC4-212ENST00000573328 ALDH2P05091 517 aa10.68□□□□□ -0.7
NPLOC4-212ENST00000573328 CTSAP10619 480 aa10.68□□□□□ -0.7
NPLOC4-212ENST00000573328 HOXB8P17481 243 aaPredicted RBP10.68□□□□□ -0.7
NPLOC4-212ENST00000573328 FXR2P51116 673 aaKnown RBP eCLIP10.68□□□□□ -0.7
NPLOC4-212ENST00000573328 AFF1P51825 1210 aaKnown RBP10.68□□□□□ -0.7
NPLOC4-212ENST00000573328 PTGDRQ13258 359 aa10.68□□□□□ -0.7
NPLOC4-212ENST00000573328 PPP2R5AQ15172 486 aa10.68□□□□□ -0.7
NPLOC4-212ENST00000573328 ZBTB33Q86T24 672 aa10.68□□□□□ -0.7
NPLOC4-212ENST00000573328 DEPTORQ8TB45 409 aa10.68□□□□□ -0.7
NPLOC4-212ENST00000573328 IFT74Q96LB3 600 aa10.68□□□□□ -0.7
NPLOC4-212ENST00000573328 PRIMPOLQ96LW4 560 aa10.68□□□□□ -0.7
NPLOC4-212ENST00000573328 ZFP42Q96MM3 310 aa10.68□□□□□ -0.7
NPLOC4-212ENST00000573328 GAD1Q99259 594 aa10.68□□□□□ -0.7
NPLOC4-212ENST00000573328 TMEM175Q9BSA9 504 aa10.68□□□□□ -0.7
NPLOC4-212ENST00000573328 NFKBIZQ9BYH8 718 aa10.68□□□□□ -0.7
NPLOC4-212ENST00000573328 RNF39Q9H2S5 420 aa10.68□□□□□ -0.7
NPLOC4-212ENST00000573328 C11orf16Q9NQ32 467 aa10.68□□□□□ -0.7
NPLOC4-212ENST00000573328 DDX19AQ9NUU7 478 aaKnown RBP10.68□□□□□ -0.7
NPLOC4-212ENST00000573328 STK39Q9UEW8 545 aa10.68□□□□□ -0.7
NPLOC4-212ENST00000573328 PCDHB6Q9Y5E3 794 aa10.68□□□□□ -0.7
NPLOC4-212ENST00000573328 STK24Q9Y6E0 443 aa10.68□□□□□ -0.7
NPLOC4-212ENST00000573328 MYO10Q9HD67 2058 aa10.68□□□□□ -0.7
NPLOC4-212ENST00000573328 PRR33A8MZF0 331 aa10.67□□□□□ -0.7
NPLOC4-212ENST00000573328 C2CD2LO14523 706 aa10.67□□□□□ -0.7
NPLOC4-212ENST00000573328 NRP1O14786 923 aa10.67□□□□□ -0.7
NPLOC4-212ENST00000573328 N4BP3O15049 544 aa10.67□□□□□ -0.7
NPLOC4-212ENST00000573328 PRKCBP05771 671 aa10.67□□□□□ -0.7
NPLOC4-212ENST00000573328 URODP06132 367 aa10.67□□□□□ -0.7
NPLOC4-212ENST00000573328 MUTP22033 750 aa10.67□□□□□ -0.7
NPLOC4-212ENST00000573328 AKAP5P24588 427 aa10.67□□□□□ -0.7
NPLOC4-212ENST00000573328 U2AF2P26368 475 aaKnown RBP eCLIP10.67□□□□□ -0.7
NPLOC4-212ENST00000573328 GJB2P29033 226 aa10.67□□□□□ -0.7
NPLOC4-212ENST00000573328 PRPF4BQ13523 1007 aaKnown RBP10.67□□□□□ -0.7
NPLOC4-212ENST00000573328 KCNC3Q14003 757 aa10.67□□□□□ -0.7
NPLOC4-212ENST00000573328 ZRSR1Q15695 479 aaKnown RBP10.67□□□□□ -0.7
NPLOC4-212ENST00000573328 MAPK6Q16659 721 aa10.67□□□□□ -0.7
NPLOC4-212ENST00000573328 AMHR2Q16671 573 aa10.67□□□□□ -0.7
NPLOC4-212ENST00000573328 RARS2Q5T160 578 aaKnown RBP10.67□□□□□ -0.7
NPLOC4-212ENST00000573328 SYCE2Q6PIF2 218 aa10.67□□□□□ -0.7
NPLOC4-212ENST00000573328 TMEM184AQ6ZMB5 413 aa10.67□□□□□ -0.7
NPLOC4-212ENST00000573328 SUSD6Q92537 303 aa10.67□□□□□ -0.7
NPLOC4-212ENST00000573328 TMX3Q96JJ7 454 aa10.67□□□□□ -0.7
NPLOC4-212ENST00000573328 ADPGKQ9BRR6 497 aa10.67□□□□□ -0.7
NPLOC4-212ENST00000573328 EMILIN2Q9BXX0 1053 aa10.67□□□□□ -0.7
NPLOC4-212ENST00000573328 BHMT2Q9H2M3 363 aa10.67□□□□□ -0.7
NPLOC4-212ENST00000573328 MRPL17Q9NRX2 175 aaKnown RBP10.67□□□□□ -0.7
NPLOC4-212ENST00000573328 DZANK1Q9NVP4 752 aa10.67□□□□□ -0.7
NPLOC4-212ENST00000573328 KLK14Q9P0G3 267 aa10.67□□□□□ -0.7
NPLOC4-212ENST00000573328 KIAA1024Q9UPX6 916 aa10.67□□□□□ -0.7
NPLOC4-212ENST00000573328 GIT1Q9Y2X7 761 aa10.67□□□□□ -0.7
NPLOC4-212ENST00000573328 PDCD11Q14690 1871 aaKnown RBP10.66□□□□□ -0.7
NPLOC4-212ENST00000573328 LOC730098B7Z3J9 87 aa10.66□□□□□ -0.7
NPLOC4-212ENST00000573328 LAD1O00515 517 aa10.66□□□□□ -0.7
NPLOC4-212ENST00000573328 EPCAMP16422 314 aa10.66□□□□□ -0.7
NPLOC4-212ENST00000573328 CYP11B2P19099 503 aa10.66□□□□□ -0.7
NPLOC4-212ENST00000573328 KLRC2P26717 231 aa10.66□□□□□ -0.7
NPLOC4-212ENST00000573328 NAMPTP43490 491 aa10.66□□□□□ -0.7
NPLOC4-212ENST00000573328 ITIH3Q06033 890 aa10.66□□□□□ -0.7
NPLOC4-212ENST00000573328 GRIK3Q13003 919 aa10.66□□□□□ -0.7
NPLOC4-212ENST00000573328 PTPN14Q15678 1187 aa10.66□□□□□ -0.7
NPLOC4-212ENST00000573328 HERC4Q5GLZ8 1057 aaPredicted RBP10.66□□□□□ -0.7
NPLOC4-212ENST00000573328 KRT79Q5XKE5 535 aa10.66□□□□□ -0.7
NPLOC4-212ENST00000573328 CDCA2Q69YH5 1023 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms