RNA–Protein interactions for RNA: ENST00000573095.1

HCFC1R1-204, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3

Gene HCFC1R1, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-204ENST00000573095 MLH1P40692 756 aa21.48■■□□□ 1.03
HCFC1R1-204ENST00000573095 NCBP1Q09161 790 aaKnown RBP21.48■■□□□ 1.03
HCFC1R1-204ENST00000573095 SAFBQ15424 915 aaKnown RBP eCLIP21.48■■□□□ 1.03
HCFC1R1-204ENST00000573095 RARS2Q5T160 578 aaKnown RBP21.48■■□□□ 1.03
HCFC1R1-204ENST00000573095 PIGOQ8TEQ8 1089 aa21.48■■□□□ 1.03
HCFC1R1-204ENST00000573095 ASIC4Q96FT7 647 aa21.48■■□□□ 1.03
HCFC1R1-204ENST00000573095 CPB2Q96IY4 423 aa21.48■■□□□ 1.03
HCFC1R1-204ENST00000573095 POLR3FQ9H1D9 316 aaPredicted RBP21.48■■□□□ 1.03
HCFC1R1-204ENST00000573095 TUFT1Q9NNX1 390 aa21.48■■□□□ 1.03
HCFC1R1-204ENST00000573095 MARCH5Q9NX47 278 aa21.48■■□□□ 1.03
HCFC1R1-204ENST00000573095 FAN1Q9Y2M0 1017 aa21.48■■□□□ 1.03
HCFC1R1-204ENST00000573095 C2orf16Q68DN1 1984 aa21.48■■□□□ 1.03
HCFC1R1-204ENST00000573095 ARL5CA6NH57 179 aa21.47■■□□□ 1.03
HCFC1R1-204ENST00000573095 C2CD4DB7Z1M9 353 aa21.47■■□□□ 1.03
HCFC1R1-204ENST00000573095 USO1O60763 962 aaKnown RBP21.47■■□□□ 1.03
HCFC1R1-204ENST00000573095 SEC24BO95487 1268 aa21.47■■□□□ 1.03
HCFC1R1-204ENST00000573095 SPATA31C1P0DKV0 1188 aa21.47■■□□□ 1.03
HCFC1R1-204ENST00000573095 ARF4P18085 180 aaPredicted RBP21.47■■□□□ 1.03
HCFC1R1-204ENST00000573095 NHLH1Q02575 133 aa21.47■■□□□ 1.03
HCFC1R1-204ENST00000573095 DSC1Q08554 894 aa21.47■■□□□ 1.03
HCFC1R1-204ENST00000573095 ORC2Q13416 577 aaPredicted RBP21.47■■□□□ 1.03
HCFC1R1-204ENST00000573095 SUGP1Q8IWZ8 645 aaKnown RBP21.47■■□□□ 1.03
HCFC1R1-204ENST00000573095 COLGALT2Q8IYK4 626 aa21.47■■□□□ 1.03
HCFC1R1-204ENST00000573095 GAD1Q99259 594 aa21.47■■□□□ 1.03
HCFC1R1-204ENST00000573095 HERC2P3Q9BVR0 1158 aa21.47■■□□□ 1.03
HCFC1R1-204ENST00000573095 EMILIN2Q9BXX0 1053 aa21.47■■□□□ 1.03
HCFC1R1-204ENST00000573095 SFXN1Q9H9B4 322 aa21.47■■□□□ 1.03
HCFC1R1-204ENST00000573095 TSHZ2Q9NRE2 1034 aa21.47■■□□□ 1.03
HCFC1R1-204ENST00000573095 PLXNA3P51805 1871 aa21.47■■□□□ 1.03
HCFC1R1-204ENST00000573095 LILRB3O75022 631 aa21.46■■□□□ 1.03
HCFC1R1-204ENST00000573095 SOD2P04179 222 aa21.46■■□□□ 1.03
HCFC1R1-204ENST00000573095 MCM7P33993 719 aa21.46■■□□□ 1.03
HCFC1R1-204ENST00000573095 CABP7Q86V35 215 aa21.46■■□□□ 1.03
HCFC1R1-204ENST00000573095 HACE1Q8IYU2 909 aa21.46■■□□□ 1.03
HCFC1R1-204ENST00000573095 RNF168Q8IYW5 571 aaPredicted RBP21.46■■□□□ 1.03
HCFC1R1-204ENST00000573095 FBXL6Q8N531 539 aa21.46■■□□□ 1.03
HCFC1R1-204ENST00000573095 C12orf76Q8N812 135 aaPredicted RBP21.46■■□□□ 1.03
HCFC1R1-204ENST00000573095 C8orf76Q96K31 380 aa21.46■■□□□ 1.03
HCFC1R1-204ENST00000573095 KLHL5Q96PQ7 755 aa21.46■■□□□ 1.03
HCFC1R1-204ENST00000573095 LLPHQ9BRT6 129 aaKnown RBP21.46■■□□□ 1.03
HCFC1R1-204ENST00000573095 TRIM6Q9C030 488 aaPredicted RBP21.46■■□□□ 1.03
HCFC1R1-204ENST00000573095 RNF39Q9H2S5 420 aa21.46■■□□□ 1.03
HCFC1R1-204ENST00000573095 NXF3Q9H4D5 531 aaKnown RBP21.46■■□□□ 1.03
HCFC1R1-204ENST00000573095 MRPL17Q9NRX2 175 aaKnown RBP21.46■■□□□ 1.03
HCFC1R1-204ENST00000573095 DBR1Q9UK59 544 aaKnown RBP21.46■■□□□ 1.03
HCFC1R1-204ENST00000573095 LIMCH1Q9UPQ0 1083 aa21.46■■□□□ 1.03
HCFC1R1-204ENST00000573095 GIT1Q9Y2X7 761 aa21.46■■□□□ 1.03
HCFC1R1-204ENST00000573095 PRG3Q9Y2Y8 225 aaPredicted RBP21.46■■□□□ 1.03
HCFC1R1-204ENST00000573095 HES2Q9Y543 173 aa21.46■■□□□ 1.03
HCFC1R1-204ENST00000573095 EFEMP2O95967 443 aa21.45■■□□□ 1.02
HCFC1R1-204ENST00000573095 URODP06132 367 aa21.45■■□□□ 1.02
HCFC1R1-204ENST00000573095 CNPP09543 421 aaKnown RBP21.45■■□□□ 1.02
HCFC1R1-204ENST00000573095 WEE2P0C1S8 567 aa21.45■■□□□ 1.02
HCFC1R1-204ENST00000573095 SCNN1GP51170 649 aa21.45■■□□□ 1.02
HCFC1R1-204ENST00000573095 CLCN4P51793 760 aa21.45■■□□□ 1.02
HCFC1R1-204ENST00000573095 GUCY1B3Q02153 619 aa21.45■■□□□ 1.02
HCFC1R1-204ENST00000573095 ATAT1Q5SQI0 421 aa21.45■■□□□ 1.02
HCFC1R1-204ENST00000573095 ZBTB33Q86T24 672 aa21.45■■□□□ 1.02
HCFC1R1-204ENST00000573095 CATSPER3Q86XQ3 398 aa21.45■■□□□ 1.02
HCFC1R1-204ENST00000573095 CCDC83Q8IWF9 413 aa21.45■■□□□ 1.02
HCFC1R1-204ENST00000573095 TDRD5Q8NAT2 981 aaKnown RBP21.45■■□□□ 1.02
HCFC1R1-204ENST00000573095 MCPH1Q8NEM0 835 aa21.45■■□□□ 1.02
HCFC1R1-204ENST00000573095 ZFP42Q96MM3 310 aa21.45■■□□□ 1.02
HCFC1R1-204ENST00000573095 POLR3CQ9BUI4 534 aaPredicted RBP21.45■■□□□ 1.02
HCFC1R1-204ENST00000573095 FOXP1Q9H334 677 aaPredicted RBP21.45■■□□□ 1.02
HCFC1R1-204ENST00000573095 SORCS3Q9UPU3 1222 aa21.45■■□□□ 1.02
HCFC1R1-204ENST00000573095 USTQ9Y2C2 406 aa21.45■■□□□ 1.02
HCFC1R1-204ENST00000573095 B4GALT5O43286 388 aa21.44■■□□□ 1.02
HCFC1R1-204ENST00000573095 MED24O75448 989 aa21.44■■□□□ 1.02
HCFC1R1-204ENST00000573095 SSBP05455 408 aaKnown RBP eCLIP21.44■■□□□ 1.02
HCFC1R1-204ENST00000573095 OR52Z1P0C646 297 aa21.44■■□□□ 1.02
HCFC1R1-204ENST00000573095 ATP2B1P20020 1258 aa21.44■■□□□ 1.02
HCFC1R1-204ENST00000573095 CDCA2Q69YH5 1023 aaPredicted RBP21.44■■□□□ 1.02
HCFC1R1-204ENST00000573095 SLC27A1Q6PCB7 646 aa21.44■■□□□ 1.02
HCFC1R1-204ENST00000573095 PPP4R3CPQ6ZMV5 832 aa21.44■■□□□ 1.02
HCFC1R1-204ENST00000573095 PRIMPOLQ96LW4 560 aa21.44■■□□□ 1.02
HCFC1R1-204ENST00000573095 GPRC5CQ9NQ84 441 aa21.44■■□□□ 1.02
HCFC1R1-204ENST00000573095 SSX2IPQ9Y2D8 614 aa21.44■■□□□ 1.02
HCFC1R1-204ENST00000573095 A0A087WWV3 80 aa21.43■■□□□ 1.02
HCFC1R1-204ENST00000573095 A0A1B0GUA9 196 aa21.43■■□□□ 1.02
HCFC1R1-204ENST00000573095 LRRIQ4A6NIV6 560 aa21.43■■□□□ 1.02
HCFC1R1-204ENST00000573095 KLRC2P26717 231 aa21.43■■□□□ 1.02
HCFC1R1-204ENST00000573095 OR1G1P47890 313 aa21.43■■□□□ 1.02
HCFC1R1-204ENST00000573095 MTMR3Q13615 1198 aa21.43■■□□□ 1.02
HCFC1R1-204ENST00000573095 KANK3Q6NY19 840 aa21.43■■□□□ 1.02
HCFC1R1-204ENST00000573095 TMC5Q6UXY8 1006 aa21.43■■□□□ 1.02
HCFC1R1-204ENST00000573095 GPR149Q86SP6 731 aa21.43■■□□□ 1.02
HCFC1R1-204ENST00000573095 UBALD2Q8IYN6 164 aa21.43■■□□□ 1.02
HCFC1R1-204ENST00000573095 ZDHHC14Q8IZN3 488 aa21.43■■□□□ 1.02
HCFC1R1-204ENST00000573095 KREMEN2Q8NCW0 462 aa21.43■■□□□ 1.02
HCFC1R1-204ENST00000573095 NACC1Q96RE7 527 aa21.43■■□□□ 1.02
HCFC1R1-204ENST00000573095 RPS6KC1Q96S38 1066 aa21.43■■□□□ 1.02
HCFC1R1-204ENST00000573095 PRRX2Q99811 253 aa21.43■■□□□ 1.02
HCFC1R1-204ENST00000573095 APOL6Q9BWW8 343 aa21.43■■□□□ 1.02
HCFC1R1-204ENST00000573095 PRMT7Q9NVM4 692 aaPredicted RBP21.43■■□□□ 1.02
HCFC1R1-204ENST00000573095 MIOSQ9NXC5 875 aa21.43■■□□□ 1.02
HCFC1R1-204ENST00000573095 MYO10Q9HD67 2058 aa21.43■■□□□ 1.02
HCFC1R1-204ENST00000573095 WDFY4Q6ZS81 3184 aa21.42■■□□□ 1.02
HCFC1R1-204ENST00000573095 NPTXRO95502 500 aa21.42■■□□□ 1.02
HCFC1R1-204ENST00000573095 RPA1P27694 616 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms