RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 EFNA5P52803 228 aa17.82■□□□□ 0.44
NDE1-205ENST00000572756 PDE12Q6L8Q7 609 aaKnown RBP17.82■□□□□ 0.44
NDE1-205ENST00000572756 TMEM173Q86WV6 379 aaPredicted RBP17.82■□□□□ 0.44
NDE1-205ENST00000572756 ZNF280BQ86YH2 543 aa17.82■□□□□ 0.44
NDE1-205ENST00000572756 HSCBQ8IWL3 235 aa17.82■□□□□ 0.44
NDE1-205ENST00000572756 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.82■□□□□ 0.44
NDE1-205ENST00000572756 URGCPQ8TCY9 931 aa17.82■□□□□ 0.44
NDE1-205ENST00000572756 DRC1Q96MC2 740 aa17.82■□□□□ 0.44
NDE1-205ENST00000572756 TIPINQ9BVW5 301 aa17.82■□□□□ 0.44
NDE1-205ENST00000572756 PDZD7Q9H5P4 517 aa17.82■□□□□ 0.44
NDE1-205ENST00000572756 KANSL3Q9P2N6 904 aa17.82■□□□□ 0.44
NDE1-205ENST00000572756 DNAJB4Q9UDY4 337 aa17.82■□□□□ 0.44
NDE1-205ENST00000572756 MORC2Q9Y6X9 1032 aaPredicted RBP17.82■□□□□ 0.44
NDE1-205ENST00000572756 BDP1A6H8Y1 2624 aa17.82■□□□□ 0.44
NDE1-205ENST00000572756 ZMYM2Q9UBW7 1377 aa17.81■□□□□ 0.44
NDE1-205ENST00000572756 CARNS1A5YM72 827 aa17.81■□□□□ 0.44
NDE1-205ENST00000572756 NT5C1B-RDH14C9J2C7 533 aa17.81■□□□□ 0.44
NDE1-205ENST00000572756 N4BP3O15049 544 aa17.81■□□□□ 0.44
NDE1-205ENST00000572756 DDHD2O94830 711 aa17.81■□□□□ 0.44
NDE1-205ENST00000572756 PLA2G4BP0C869 781 aa17.81■□□□□ 0.44
NDE1-205ENST00000572756 UBA7P41226 1012 aa17.81■□□□□ 0.44
NDE1-205ENST00000572756 NPTX2P47972 431 aa17.81■□□□□ 0.44
NDE1-205ENST00000572756 KRT17Q04695 432 aa17.81■□□□□ 0.44
NDE1-205ENST00000572756 RNASELQ05823 741 aaKnown RBP17.81■□□□□ 0.44
NDE1-205ENST00000572756 ADAM15Q13444 863 aa17.81■□□□□ 0.44
NDE1-205ENST00000572756 PRPF4BQ13523 1007 aaKnown RBP17.81■□□□□ 0.44
NDE1-205ENST00000572756 BCL7CQ8WUZ0 217 aaPredicted RBP17.81■□□□□ 0.44
NDE1-205ENST00000572756 PPP2R3CQ969Q6 453 aa17.81■□□□□ 0.44
NDE1-205ENST00000572756 CDK5RAP3Q96JB5 506 aa17.81■□□□□ 0.44
NDE1-205ENST00000572756 TRIM6Q9C030 488 aaPredicted RBP17.81■□□□□ 0.44
NDE1-205ENST00000572756 ZSCAN16Q9H4T2 348 aaPredicted RBP17.81■□□□□ 0.44
NDE1-205ENST00000572756 C17orf75Q9HAS0 396 aa17.81■□□□□ 0.44
NDE1-205ENST00000572756 CLDND1Q9NY35 253 aa17.81■□□□□ 0.44
NDE1-205ENST00000572756 KCND2Q9NZV8 630 aa17.81■□□□□ 0.44
NDE1-205ENST00000572756 ARHGAP28Q9P2N2 729 aa17.81■□□□□ 0.44
NDE1-205ENST00000572756 PUF60Q9UHX1 559 aaKnown RBP17.81■□□□□ 0.44
NDE1-205ENST00000572756 FBXO2Q9UK22 296 aaPredicted RBP17.81■□□□□ 0.44
NDE1-205ENST00000572756 GIT1Q9Y2X7 761 aa17.81■□□□□ 0.44
NDE1-205ENST00000572756 ARL5CA6NH57 179 aa17.8■□□□□ 0.44
NDE1-205ENST00000572756 H3BQ06 376 aaPredicted RBP17.8■□□□□ 0.44
NDE1-205ENST00000572756 LINC01565O15544 149 aa17.8■□□□□ 0.44
NDE1-205ENST00000572756 POMCP01189 267 aa17.8■□□□□ 0.44
NDE1-205ENST00000572756 MLH1P40692 756 aa17.8■□□□□ 0.44
NDE1-205ENST00000572756 SLC11A1P49279 550 aa17.8■□□□□ 0.44
NDE1-205ENST00000572756 PEX3P56589 373 aa17.8■□□□□ 0.44
NDE1-205ENST00000572756 DLX2Q07687 328 aaPredicted RBP17.8■□□□□ 0.44
NDE1-205ENST00000572756 ARSHQ5FYA8 562 aa17.8■□□□□ 0.44
NDE1-205ENST00000572756 EFHBQ8N7U6 833 aa17.8■□□□□ 0.44
NDE1-205ENST00000572756 GSTCDQ8NEC7 633 aa17.8■□□□□ 0.44
NDE1-205ENST00000572756 IGSF21Q96ID5 467 aa17.8■□□□□ 0.44
NDE1-205ENST00000572756 ZFP42Q96MM3 310 aa17.8■□□□□ 0.44
NDE1-205ENST00000572756 USP28Q96RU2 1077 aa17.8■□□□□ 0.44
NDE1-205ENST00000572756 GAD1Q99259 594 aa17.8■□□□□ 0.44
NDE1-205ENST00000572756 TCF25Q9BQ70 676 aa17.8■□□□□ 0.44
NDE1-205ENST00000572756 CCSER1Q9C0I3 900 aa17.8■□□□□ 0.44
NDE1-205ENST00000572756 GBP3Q9H0R5 595 aa17.8■□□□□ 0.44
NDE1-205ENST00000572756 NGRNQ9NPE2 291 aaKnown RBP17.8■□□□□ 0.44
NDE1-205ENST00000572756 BLOC1S4Q9NUP1 217 aa17.8■□□□□ 0.44
NDE1-205ENST00000572756 MIOSQ9NXC5 875 aa17.8■□□□□ 0.44
NDE1-205ENST00000572756 USP20Q9Y2K6 914 aa17.8■□□□□ 0.44
NDE1-205ENST00000572756 SRPRBQ9Y5M8 271 aaKnown RBP17.8■□□□□ 0.44
NDE1-205ENST00000572756 TRIP11Q15643 1979 aa17.8■□□□□ 0.44
NDE1-205ENST00000572756 PHLPP2Q6ZVD8 1323 aa17.79■□□□□ 0.44
NDE1-205ENST00000572756 TBX10O75333 385 aa17.79■□□□□ 0.44
NDE1-205ENST00000572756 GLP2RO95838 553 aa17.79■□□□□ 0.44
NDE1-205ENST00000572756 SSBP05455 408 aaKnown RBP eCLIP17.79■□□□□ 0.44
NDE1-205ENST00000572756 PLCG1P19174 1290 aa17.79■□□□□ 0.44
NDE1-205ENST00000572756 AKAP5P24588 427 aa17.79■□□□□ 0.44
NDE1-205ENST00000572756 MARCKSP29966 332 aaPredicted RBP17.79■□□□□ 0.44
NDE1-205ENST00000572756 NRIP1P48552 1158 aa17.79■□□□□ 0.44
NDE1-205ENST00000572756 DSC1Q08554 894 aa17.79■□□□□ 0.44
NDE1-205ENST00000572756 DMP1Q13316 513 aaPredicted RBP17.79■□□□□ 0.44
NDE1-205ENST00000572756 KARSQ15046 597 aaKnown RBP17.79■□□□□ 0.44
NDE1-205ENST00000572756 NT5DC1Q5TFE4 455 aa17.79■□□□□ 0.44
NDE1-205ENST00000572756 PLPP4Q5VZY2 271 aa17.79■□□□□ 0.44
NDE1-205ENST00000572756 EEF1DP3Q658K8 133 aa17.79■□□□□ 0.44
NDE1-205ENST00000572756 USP49Q70CQ1 688 aa17.79■□□□□ 0.44
NDE1-205ENST00000572756 TAS1R3Q7RTX0 852 aa17.79■□□□□ 0.44
NDE1-205ENST00000572756 HACE1Q8IYU2 909 aa17.79■□□□□ 0.44
NDE1-205ENST00000572756 MICAL1Q8TDZ2 1067 aa17.79■□□□□ 0.44
NDE1-205ENST00000572756 CALML4Q96GE6 196 aa17.79■□□□□ 0.44
NDE1-205ENST00000572756 TMEM169Q96HH4 297 aa17.79■□□□□ 0.44
NDE1-205ENST00000572756 UHRF1Q96T88 793 aaPredicted RBP17.79■□□□□ 0.44
NDE1-205ENST00000572756 TMEM175Q9BSA9 504 aa17.79■□□□□ 0.44
NDE1-205ENST00000572756 NTPCRQ9BSD7 190 aaKnown RBP17.79■□□□□ 0.44
NDE1-205ENST00000572756 APOL6Q9BWW8 343 aa17.79■□□□□ 0.44
NDE1-205ENST00000572756 IGFLR1Q9H665 355 aa17.79■□□□□ 0.44
NDE1-205ENST00000572756 TMEM134Q9H6X4 195 aa17.79■□□□□ 0.44
NDE1-205ENST00000572756 CCDC169A6NNP5 214 aa17.78■□□□□ 0.44
NDE1-205ENST00000572756 HIDE1A8MVS5 230 aa17.78■□□□□ 0.44
NDE1-205ENST00000572756 K7ERI5 159 aa17.78■□□□□ 0.44
NDE1-205ENST00000572756 LIG1P18858 919 aa17.78■□□□□ 0.44
NDE1-205ENST00000572756 SCNN1GP51170 649 aa17.78■□□□□ 0.44
NDE1-205ENST00000572756 RAD51AP2Q09MP3 1159 aa17.78■□□□□ 0.44
NDE1-205ENST00000572756 DUSP6Q16828 381 aa17.78■□□□□ 0.44
NDE1-205ENST00000572756 RBM23Q86U06 439 aaKnown RBP17.78■□□□□ 0.44
NDE1-205ENST00000572756 COLGALT2Q8IYK4 626 aa17.78■□□□□ 0.44
NDE1-205ENST00000572756 SPIRE2Q8WWL2 714 aa17.78■□□□□ 0.44
NDE1-205ENST00000572756 EPSTI1Q96J88 318 aa17.78■□□□□ 0.44
NDE1-205ENST00000572756 NECAB3Q96P71 396 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms