RNA–Protein interactions for RNA: ENST00000571961.7

JRK-203, Transcript of Jrk helix-turn-helix protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene JRK, Length 2,687 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JRK-203ENST00000571961 SLC9A9Q8IVB4 645 aa17.3■□□□□ 0.36
JRK-203ENST00000571961 CCDC197Q8NCU1 140 aa17.3■□□□□ 0.36
JRK-203ENST00000571961 ZSWIM2Q8NEG5 633 aa17.3■□□□□ 0.36
JRK-203ENST00000571961 ATXN2LQ8WWM7 1075 aaKnown RBP17.3■□□□□ 0.36
JRK-203ENST00000571961 MTRF1LQ9UGC7 380 aaKnown RBP17.3■□□□□ 0.36
JRK-203ENST00000571961 NPR1P16066 1061 aa17.3■□□□□ 0.36
JRK-203ENST00000571961 RFX1P22670 979 aa17.3■□□□□ 0.36
JRK-203ENST00000571961 KCNJ1P48048 391 aa17.3■□□□□ 0.36
JRK-203ENST00000571961 PEX5P50542 639 aa17.3■□□□□ 0.36
JRK-203ENST00000571961 CCDC105Q8IYK2 499 aa17.3■□□□□ 0.36
JRK-203ENST00000571961 CBWD1Q9BRT8 395 aa17.3■□□□□ 0.36
JRK-203ENST00000571961 STRA6Q9BX79 667 aa17.3■□□□□ 0.36
JRK-203ENST00000571961 CCDC113Q9H0I3 377 aa17.3■□□□□ 0.36
JRK-203ENST00000571961 PCYOX1Q9UHG3 505 aa17.3■□□□□ 0.36
JRK-203ENST00000571961 PODXLO00592 558 aa17.29■□□□□ 0.36
JRK-203ENST00000571961 HSPA6P17066 643 aa17.29■□□□□ 0.36
JRK-203ENST00000571961 RDXP35241 583 aaKnown RBP17.29■□□□□ 0.36
JRK-203ENST00000571961 CETN1Q12798 172 aa17.29■□□□□ 0.36
JRK-203ENST00000571961 MKRN4PQ13434 485 aaPredicted RBP17.29■□□□□ 0.36
JRK-203ENST00000571961 PADI6Q6TGC4 694 aa17.29■□□□□ 0.36
JRK-203ENST00000571961 INTS8Q75QN2 995 aaKnown RBP17.29■□□□□ 0.36
JRK-203ENST00000571961 PARP9Q8IXQ6 854 aa17.29■□□□□ 0.36
JRK-203ENST00000571961 LRRC34Q8IZ02 419 aa17.29■□□□□ 0.36
JRK-203ENST00000571961 ACER1Q8TDN7 264 aa17.29■□□□□ 0.36
JRK-203ENST00000571961 PRMT1Q99873 361 aaKnown RBP17.29■□□□□ 0.36
JRK-203ENST00000571961 INTS9Q9NV88 658 aaKnown RBP17.29■□□□□ 0.36
JRK-203ENST00000571961 PFASO15067 1338 aa17.29■□□□□ 0.36
JRK-203ENST00000571961 RTN2O75298 545 aa17.29■□□□□ 0.36
JRK-203ENST00000571961 IBSPP21815 317 aaPredicted RBP17.29■□□□□ 0.36
JRK-203ENST00000571961 C6orf118Q5T5N4 469 aa17.29■□□□□ 0.36
JRK-203ENST00000571961 CCDC25Q86WR0 208 aa17.29■□□□□ 0.36
JRK-203ENST00000571961 TEKT3Q9BXF9 490 aa17.29■□□□□ 0.36
JRK-203ENST00000571961 WDR11Q9BZH6 1224 aa17.29■□□□□ 0.36
JRK-203ENST00000571961 MTFR1LQ9H019 292 aa17.29■□□□□ 0.36
JRK-203ENST00000571961 KCND2Q9NZV8 630 aa17.29■□□□□ 0.36
JRK-203ENST00000571961 DBR1Q9UK59 544 aaKnown RBP17.29■□□□□ 0.36
JRK-203ENST00000571961 TRPC6Q9Y210 931 aa17.29■□□□□ 0.36
JRK-203ENST00000571961 PCDHA3Q9Y5H8 950 aa17.29■□□□□ 0.36
JRK-203ENST00000571961 MYH11P35749 1972 aa17.28■□□□□ 0.36
JRK-203ENST00000571961 IFNAR2P48551 515 aa17.28■□□□□ 0.36
JRK-203ENST00000571961 ADCY2Q08462 1091 aa17.28■□□□□ 0.36
JRK-203ENST00000571961 TBC1D10BQ4KMP7 808 aaPredicted RBP17.28■□□□□ 0.36
JRK-203ENST00000571961 CCDC38Q502W7 563 aa17.28■□□□□ 0.36
JRK-203ENST00000571961 DACT2Q5SW24 774 aa17.28■□□□□ 0.36
JRK-203ENST00000571961 NOP9Q86U38 636 aaKnown RBP17.28■□□□□ 0.36
JRK-203ENST00000571961 RPS6KC1Q96S38 1066 aa17.28■□□□□ 0.36
JRK-203ENST00000571961 CSRNP1Q96S65 589 aa17.28■□□□□ 0.36
JRK-203ENST00000571961 MYCBPQ99417 103 aaPredicted RBP17.28■□□□□ 0.36
JRK-203ENST00000571961 KDM4CQ9H3R0 1056 aa17.28■□□□□ 0.36
JRK-203ENST00000571961 CCT8L1PA6NM43 557 aa17.28■□□□□ 0.36
JRK-203ENST00000571961 IPO5O00410 1097 aaKnown RBP17.28■□□□□ 0.36
JRK-203ENST00000571961 RIPK2O43353 540 aa17.28■□□□□ 0.36
JRK-203ENST00000571961 SPOPO43791 374 aa17.28■□□□□ 0.36
JRK-203ENST00000571961 CHRNB2P17787 502 aa17.28■□□□□ 0.36
JRK-203ENST00000571961 MAP2K2P36507 400 aa17.28■□□□□ 0.36
JRK-203ENST00000571961 COILP38432 576 aaPredicted RBP17.28■□□□□ 0.36
JRK-203ENST00000571961 SNCBQ16143 134 aa17.28■□□□□ 0.36
JRK-203ENST00000571961 EPC2Q52LR7 807 aa17.28■□□□□ 0.36
JRK-203ENST00000571961 PLEKHO2Q8TD55 490 aa17.28■□□□□ 0.36
JRK-203ENST00000571961 SGSM3Q96HU1 749 aa17.28■□□□□ 0.36
JRK-203ENST00000571961 SH2D3AQ9BRG2 576 aa17.28■□□□□ 0.36
JRK-203ENST00000571961 ZNF219Q9P2Y4 722 aaPredicted RBP17.28■□□□□ 0.36
JRK-203ENST00000571961 PARP2Q9UGN5 583 aa17.28■□□□□ 0.36
JRK-203ENST00000571961 CNOT7Q9UIV1 285 aaKnown RBP17.28■□□□□ 0.36
JRK-203ENST00000571961 CYP26A1O43174 497 aa17.27■□□□□ 0.36
JRK-203ENST00000571961 AGTP01019 485 aa17.27■□□□□ 0.36
JRK-203ENST00000571961 VIMP08670 466 aaKnown RBP17.27■□□□□ 0.36
JRK-203ENST00000571961 ALDH1B1P30837 517 aa17.27■□□□□ 0.36
JRK-203ENST00000571961 GSCP56915 257 aaPredicted RBP17.27■□□□□ 0.36
JRK-203ENST00000571961 C1orf220Q5T0J3 134 aa17.27■□□□□ 0.36
JRK-203ENST00000571961 STRIP1Q5VSL9 837 aa17.27■□□□□ 0.36
JRK-203ENST00000571961 TRMT1LQ7Z2T5 733 aaKnown RBP17.27■□□□□ 0.36
JRK-203ENST00000571961 COL23A1Q86Y22 540 aaPredicted RBP17.27■□□□□ 0.36
JRK-203ENST00000571961 EPS8L1Q8TE68 723 aa17.27■□□□□ 0.36
JRK-203ENST00000571961 POP1Q99575 1024 aaKnown RBP17.27■□□□□ 0.36
JRK-203ENST00000571961 ELAC2Q9BQ52 826 aaKnown RBP17.27■□□□□ 0.36
JRK-203ENST00000571961 A1CFQ9NQ94 594 aaKnown RBP17.27■□□□□ 0.36
JRK-203ENST00000571961 RASGRF2O14827 1237 aa17.27■□□□□ 0.35
JRK-203ENST00000571961 VIL1P09327 827 aaKnown RBP17.27■□□□□ 0.35
JRK-203ENST00000571961 RARAP10276 462 aa17.27■□□□□ 0.35
JRK-203ENST00000571961 ALAS1P13196 640 aa17.27■□□□□ 0.35
JRK-203ENST00000571961 MUTP22033 750 aa17.27■□□□□ 0.35
JRK-203ENST00000571961 SLC47A2Q86VL8 602 aa17.27■□□□□ 0.35
JRK-203ENST00000571961 SLC13A5Q86YT5 568 aaPredicted RBP17.27■□□□□ 0.35
JRK-203ENST00000571961 PPM1KQ8N3J5 372 aa17.27■□□□□ 0.35
JRK-203ENST00000571961 ANKS4BQ8N8V4 417 aa17.27■□□□□ 0.35
JRK-203ENST00000571961 ZNF622Q969S3 477 aaKnown RBP eCLIP17.27■□□□□ 0.35
JRK-203ENST00000571961 SCLT1Q96NL6 688 aa17.27■□□□□ 0.35
JRK-203ENST00000571961 NUP85Q9BW27 656 aa17.27■□□□□ 0.35
JRK-203ENST00000571961 MRIQ9BWK5 157 aa17.27■□□□□ 0.35
JRK-203ENST00000571961 WNT8AQ9H1J5 351 aa17.27■□□□□ 0.35
JRK-203ENST00000571961 GEMIN8Q9NWZ8 242 aaKnown RBP17.27■□□□□ 0.35
JRK-203ENST00000571961 UTRNP46939 3433 aa17.27■□□□□ 0.35
JRK-203ENST00000571961 NRXN2Q9P2S2 1712 aa17.27■□□□□ 0.35
JRK-203ENST00000571961 GOLGA8IPA6NC78 632 aa17.26■□□□□ 0.35
JRK-203ENST00000571961 GOLGA8JA6NMD2 632 aa17.26■□□□□ 0.35
JRK-203ENST00000571961 GHRP10912 638 aa17.26■□□□□ 0.35
JRK-203ENST00000571961 ZYXQ15942 572 aaKnown RBP17.26■□□□□ 0.35
JRK-203ENST00000571961 NSMFQ6X4W1 530 aa17.26■□□□□ 0.35
JRK-203ENST00000571961 FAM228AQ86W67 206 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms