RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 STXBP4Q6ZWJ1 553 aa18.79■□□□□ 0.6
SCARF1-205ENST00000571272 TBC1D1Q86TI0 1168 aaPredicted RBP18.79■□□□□ 0.6
SCARF1-205ENST00000571272 PNMA8AQ86V59 439 aaPredicted RBP18.79■□□□□ 0.6
SCARF1-205ENST00000571272 TAX1BP1Q86VP1 789 aa18.79■□□□□ 0.6
SCARF1-205ENST00000571272 COL23A1Q86Y22 540 aaPredicted RBP18.79■□□□□ 0.6
SCARF1-205ENST00000571272 N4BP2L2Q92802 583 aaPredicted RBP18.79■□□□□ 0.6
SCARF1-205ENST00000571272 CNOT7Q9UIV1 285 aaKnown RBP18.79■□□□□ 0.6
SCARF1-205ENST00000571272 SGPL1O95470 568 aa18.79■□□□□ 0.6
SCARF1-205ENST00000571272 CYP3A4P08684 503 aa18.79■□□□□ 0.6
SCARF1-205ENST00000571272 LONRF1Q17RB8 773 aa18.79■□□□□ 0.6
SCARF1-205ENST00000571272 ABCB5Q2M3G0 1257 aa18.79■□□□□ 0.6
SCARF1-205ENST00000571272 CCDC63Q8NA47 563 aa18.79■□□□□ 0.6
SCARF1-205ENST00000571272 ZSWIM2Q8NEG5 633 aa18.79■□□□□ 0.6
SCARF1-205ENST00000571272 DBNDD1Q9H9R9 158 aa18.79■□□□□ 0.6
SCARF1-205ENST00000571272 MLXIPLQ9NP71 852 aa18.79■□□□□ 0.6
SCARF1-205ENST00000571272 ABCF3Q9NUQ8 709 aa18.79■□□□□ 0.6
SCARF1-205ENST00000571272 FAM198AQ9UFP1 575 aa18.79■□□□□ 0.6
SCARF1-205ENST00000571272 FOXO6A8MYZ6 492 aa18.78■□□□□ 0.6
SCARF1-205ENST00000571272 SPOPO43791 374 aa18.78■□□□□ 0.6
SCARF1-205ENST00000571272 CLUL1Q15846 466 aa18.78■□□□□ 0.6
SCARF1-205ENST00000571272 VPS72Q15906 364 aa18.78■□□□□ 0.6
SCARF1-205ENST00000571272 TRPM8Q7Z2W7 1104 aa18.78■□□□□ 0.6
SCARF1-205ENST00000571272 DDX23Q9BUQ8 820 aaKnown RBP18.78■□□□□ 0.6
SCARF1-205ENST00000571272 PRR12Q9ULL5 1215 aa18.78■□□□□ 0.6
SCARF1-205ENST00000571272 MYH11P35749 1972 aa18.78■□□□□ 0.6
SCARF1-205ENST00000571272 DDX39AO00148 427 aaKnown RBP18.78■□□□□ 0.6
SCARF1-205ENST00000571272 HIP1RO75146 1068 aa18.78■□□□□ 0.6
SCARF1-205ENST00000571272 ACSL3O95573 720 aa18.78■□□□□ 0.6
SCARF1-205ENST00000571272 RARAP10276 462 aa18.78■□□□□ 0.6
SCARF1-205ENST00000571272 CREB1P16220 341 aa18.78■□□□□ 0.6
SCARF1-205ENST00000571272 COILP38432 576 aaPredicted RBP18.78■□□□□ 0.6
SCARF1-205ENST00000571272 PRELPP51888 382 aa18.78■□□□□ 0.6
SCARF1-205ENST00000571272 ZNF131P52739 623 aa18.78■□□□□ 0.6
SCARF1-205ENST00000571272 TMEM179Q6ZVK1 233 aa18.78■□□□□ 0.6
SCARF1-205ENST00000571272 FMNL3Q8IVF7 1028 aa18.78■□□□□ 0.6
SCARF1-205ENST00000571272 DYDC1Q8WWB3 177 aa18.78■□□□□ 0.6
SCARF1-205ENST00000571272 SEL1LQ9UBV2 794 aa18.78■□□□□ 0.6
SCARF1-205ENST00000571272 K7ENM7 598 aa18.77■□□□□ 0.6
SCARF1-205ENST00000571272 ATP6V1G2O95670 118 aa18.77■□□□□ 0.6
SCARF1-205ENST00000571272 GH2P01242 217 aa18.77■□□□□ 0.6
SCARF1-205ENST00000571272 RARGP13631 454 aa18.77■□□□□ 0.6
SCARF1-205ENST00000571272 EZRP15311 586 aaKnown RBP18.77■□□□□ 0.6
SCARF1-205ENST00000571272 HSPA6P17066 643 aa18.77■□□□□ 0.6
SCARF1-205ENST00000571272 ELF1P32519 619 aa18.77■□□□□ 0.6
SCARF1-205ENST00000571272 ITIH4Q14624 930 aa18.77■□□□□ 0.6
SCARF1-205ENST00000571272 CNGA2Q16280 664 aa18.77■□□□□ 0.6
SCARF1-205ENST00000571272 NSMFQ6X4W1 530 aa18.77■□□□□ 0.6
SCARF1-205ENST00000571272 NACC1Q96RE7 527 aa18.77■□□□□ 0.6
SCARF1-205ENST00000571272 NOD2Q9HC29 1040 aa18.77■□□□□ 0.6
SCARF1-205ENST00000571272 PKD2L1Q9P0L9 805 aa18.77■□□□□ 0.6
SCARF1-205ENST00000571272 PARP2Q9UGN5 583 aa18.77■□□□□ 0.6
SCARF1-205ENST00000571272 SLC12A4Q9UP95 1085 aa18.77■□□□□ 0.6
SCARF1-205ENST00000571272 TBC1D10BQ4KMP7 808 aaPredicted RBP18.77■□□□□ 0.6
SCARF1-205ENST00000571272 CCDC174Q6PII3 467 aa18.77■□□□□ 0.6
SCARF1-205ENST00000571272 TRMT1LQ7Z2T5 733 aaKnown RBP18.77■□□□□ 0.6
SCARF1-205ENST00000571272 EXOC3L1Q86VI1 746 aa18.77■□□□□ 0.6
SCARF1-205ENST00000571272 SLC13A5Q86YT5 568 aaPredicted RBP18.77■□□□□ 0.6
SCARF1-205ENST00000571272 CBWD1Q9BRT8 395 aa18.77■□□□□ 0.6
SCARF1-205ENST00000571272 UNC45AQ9H3U1 944 aa18.77■□□□□ 0.6
SCARF1-205ENST00000571272 DNAJC17Q9NVM6 304 aaKnown RBP18.77■□□□□ 0.6
SCARF1-205ENST00000571272 A0A1W2PRG0 241 aa18.76■□□□□ 0.59
SCARF1-205ENST00000571272 ARP10275 920 aa18.76■□□□□ 0.59
SCARF1-205ENST00000571272 HADHBP55084 474 aaKnown RBP18.76■□□□□ 0.59
SCARF1-205ENST00000571272 PPP2R5CQ13362 524 aa18.76■□□□□ 0.59
SCARF1-205ENST00000571272 SLMAPQ14BN4 828 aa18.76■□□□□ 0.59
SCARF1-205ENST00000571272 DAW1Q8N136 415 aa18.76■□□□□ 0.59
SCARF1-205ENST00000571272 GMCL1Q96IK5 515 aa18.76■□□□□ 0.59
SCARF1-205ENST00000571272 SH2D3AQ9BRG2 576 aa18.76■□□□□ 0.59
SCARF1-205ENST00000571272 LXNQ9BS40 222 aa18.76■□□□□ 0.59
SCARF1-205ENST00000571272 AGAP1Q9UPQ3 857 aa18.76■□□□□ 0.59
SCARF1-205ENST00000571272 PFASO15067 1338 aa18.76■□□□□ 0.59
SCARF1-205ENST00000571272 ARHGEF35A5YM69 484 aa18.76■□□□□ 0.59
SCARF1-205ENST00000571272 RTN2O75298 545 aa18.76■□□□□ 0.59
SCARF1-205ENST00000571272 VAMP7P51809 220 aa18.76■□□□□ 0.59
SCARF1-205ENST00000571272 SNX1Q13596 522 aa18.76■□□□□ 0.59
SCARF1-205ENST00000571272 NOP9Q86U38 636 aaKnown RBP18.76■□□□□ 0.59
SCARF1-205ENST00000571272 C1orf54Q8WWF1 131 aa18.76■□□□□ 0.59
SCARF1-205ENST00000571272 ART4Q93070 314 aa18.76■□□□□ 0.59
SCARF1-205ENST00000571272 TAOK3Q9H2K8 898 aa18.76■□□□□ 0.59
SCARF1-205ENST00000571272 MTUS1Q9ULD2 1270 aa18.76■□□□□ 0.59
SCARF1-205ENST00000571272 CYP26A1O43174 497 aa18.75■□□□□ 0.59
SCARF1-205ENST00000571272 RPSAP08865 295 aaKnown RBP18.75■□□□□ 0.59
SCARF1-205ENST00000571272 DLATP10515 647 aaKnown RBP18.75■□□□□ 0.59
SCARF1-205ENST00000571272 CHRNB2P17787 502 aa18.75■□□□□ 0.59
SCARF1-205ENST00000571272 CETN1Q12798 172 aa18.75■□□□□ 0.59
SCARF1-205ENST00000571272 SLC47A2Q86VL8 602 aa18.75■□□□□ 0.59
SCARF1-205ENST00000571272 GMCL1P1Q8NEA9 526 aa18.75■□□□□ 0.59
SCARF1-205ENST00000571272 SLC5A5Q92911 643 aa18.75■□□□□ 0.59
SCARF1-205ENST00000571272 ELMO3Q96BJ8 720 aa18.75■□□□□ 0.59
SCARF1-205ENST00000571272 RPS6KC1Q96S38 1066 aa18.75■□□□□ 0.59
SCARF1-205ENST00000571272 ZNF577Q9BSK1 485 aa18.75■□□□□ 0.59
SCARF1-205ENST00000571272 NUP85Q9BW27 656 aa18.75■□□□□ 0.59
SCARF1-205ENST00000571272 CDC42EP4Q9H3Q1 356 aaKnown RBP18.75■□□□□ 0.59
SCARF1-205ENST00000571272 TAF1LQ8IZX4 1826 aa18.75■□□□□ 0.59
SCARF1-205ENST00000571272 ALAS1P13196 640 aa18.75■□□□□ 0.59
SCARF1-205ENST00000571272 CALCOCO2Q13137 446 aa18.75■□□□□ 0.59
SCARF1-205ENST00000571272 TATDN1Q6P1N9 297 aa18.75■□□□□ 0.59
SCARF1-205ENST00000571272 TAOK1Q7L7X3 1001 aa18.75■□□□□ 0.59
SCARF1-205ENST00000571272 ZNF564Q8TBZ8 553 aaPredicted RBP18.75■□□□□ 0.59
SCARF1-205ENST00000571272 FGFR1OP2Q9NVK5 253 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms